| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is 239616879
Identifier: 239616879
GI number: 239616879
Start: 506549
End: 509275
Strand: Direct
Name: 239616879
Synonym: Kole_0474
Alternate gene names: NA
Gene position: 506549-509275 (Clockwise)
Preceding gene: 239616878
Following gene: 239616880
Centisome position: 22.0
GC content: 40.67
Gene sequence:
>2727_bases ATGAACAGGAAAACAGGAGTTATTCTTCCGCTCACAATGATTTTACTTCTGACAGTTTCGATTCTCGCCATATCTATGTT GTCAAGAAGTTCGGCAACAGCAAAAATTCTGGTCGAAAAAATAAGCAAATCAGAGCTCCAGATGAACGCCGGAAATATTT TCCTTGCAAATCTAGCTTATATCCAAGAAAAATACTTGGAGCACGGTGCTTTATTGATAGATGAATATACCGAATACACA AAACTTTTCTCAGCACCTTACTGGTATACGAATTTTCTAAGCTCTTTCAATGAAGCCACTCTTGAAGGTCAGGGATGGAC CGAATTCTTCGGTATGTTTTACGAAGATAGGTTTTACATTCCTGGTGATGACTTAAGAAAAGTTTTCCAGAAGCTAGCTG AAGGGAAAAATATAGACCTTGTGATGATCCCTCATAAGAAATTCCCGAGTTCGCTCTTAACAATCGTTCAGGTTGAATAT CACGGTATCAAAGGTTACTGTTGGGGTGTCGTTAGCCCGAGATACTTTAGCAACTGGTCAAGATTTGAACTTGAAAGCAA TACCACCGCTTATTGGTCTCCAGGATCAATAATTACCGGCCCAACCTTTTTCGGTTCTGCAGGCCTTGGTGGTGCGGGAA ACGGCGGTCTTAGAATCAGCGCAATAGTTCCGCCAGATCCTGATAATGTTTCAGAATATGGTCCCATCTTCAATGGTGAA TCATGGTATGAGTCATGGAATATGAATCTTTCTCTTAACCCTGACTTATCCGAAAGAAGACGAATATTTGTAGATCAAGA CAATGACGGTGACTATGAAACGAATCTCGGCATCAAAACTTATGCTATTTATGAAGACGGTTCCAGAAAATGGATTTATC TTTCTGATTTTACGCAAGTTATCGTTGCTACCGATTACAAGACTGAAAACGGAAACCTGAAGGTCAAAGGAGAAATAAAG GATTTCATCCCACACGGTGTTTCCGGTGATTTCAGCGCGGAATTTTTACCATGGTATTTACCATCCGGAGCTAGAAAAGT AGATCAGGAATCGATAGAACAATTAGAAACCAGGTTTAACGAAATTGCAGATTATTACGACACGCAGTATGGAAATGTTA GTCCCTTGGAAGATATTTTGACTACTTCTTATTTCGCAACCCAGACGATGCTTCAAGCGGTCAATAGTTTCGGAATACAC TTTAAAGATACAGAAAGGAACCTTGGTAGTGGAGACAAAACGGTAGTGGAAAGCGACATACAGAATATTACGCGACAGCT AGATGAAACCAATGTTATCAACGATATCATAGACGATGTCAGAGAATGGATTGACAGCGACGAAAAATTGAGGGAATCCG TTAACTACGATCTTGGTTACCCAATAAATTCCAGGTCTTTTTTAAGTGACGGAGATATAGAATACTGGCTCGAAAATTTC GTTTTGATAGAGCTTTCTACTCCTGAGGTAATTGTAGAACAAAAGAAGATAATAACAGAACGCCAGACAACAGGATCAGT CACCATTGTAGATTTTGCTTCCAACGTCTCAATAAGCGGTGACGTTGTCACAGGAAATACCTTAAAAACCATCCTTCAGC GCGATGATATTCCGCTCAATCTATCTGAAAAATACTCTGTCCTCGAATTTTCATGGCCTCGTGAAGTAAGAATCGGTAAT GGTGGAACGATTAGAGAAAGATATAGAATAGCAACCCGCAAGGCATTATCATATTCCAAAGCCCCTGTTGATGTTAATTT AATATATCACGGACAAACAATAAGAAGAATCTGGTGGTGGATTTGGTGGAAACCAAAAATATGGACAAAAACAGGTCTTA CTGCCTACGTTCCATCTGAAGTTGATTCATGGAGCGATTGGAGCTACAGCGGATGGAGCGGCTGGGAGACAATAGCAGGA GGCCGCGGTCGTGGGCATACTCACACTTACACAGCTGATGTTGATTTTTATTTGATAACCGACCCGGGCAACTTCGATAA TATCAATTTTAGCTCTATCGCTGTTTATAAAGTCGACTCTGATGATGAAGGTGCCTATCCAAGTTTCACTTCAACACCTG TTGAAGTTGTTCACCGTGGTCTCATGGTAGTCGAAGATAATGTGGAAATTGGAGGAGCCGGTATCACCGGTGGAATTGGA AAGAATCTCGGAAGAGAAGCGACGGTTATAGACGGCAAGTTCACCATACTTTCGAGAGAAGGAGATATTTCCACAAATGG AGACATTGTCTATAACGATATGCTCAATGATCCAACATTCAGAAATTATTTTATTACCCCGGGAAGGCCGTTCAATCCGG ATTATGATCCAAATGATGCAGTCAACAACACCCAGACTGACGACATGTTGAACCTTGTTGTTGCCGATGGAACGATAAAA TTACCATATCATAATACGCGCGAATGGTATAACAAGGTAAAAAACATAAAGATTACAGCCAATTTATTTGCCTTTGGAAA AGGTTCAAGAGGACAAATTATTATAGAAGGTTATCAACGCTATGCAGAAAACATGGGGTACAGGCACCTCTTTGGAACCA TGGTGGATAGAGATAGCGGCGCTGCGGGAATAATAGACAGATGGGGAAACATAACAGGTTTTAGAAGCAGAAACTACTAT GATGAAAGGCTTTATGGAAATGAAGATATGCCCTTTGCGACACCAGAATCAAATCTGATACGGGCAACAGGAATTAGTTT CAAGTGA
Upstream 100 bases:
>100_bases AGTTTTGGGTACTTGAGACCGAAAAAGCGTCAGAAATCTATATAGCGGTTAAACTATTGAAAGATTGGAGATAGGTGCTC AAGTGCCCGGGGGTGGTTGT
Downstream 100 bases:
>100_bases TCTTTTGGAATAAAAAACGATAATTTCATTAAAGTCTCCCCGAAAAAGATTGCCGGGGAGATCTTTTTAATTTTAAGTGA TACAATTTCTAAAGGTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 908; Mature: 908
Protein sequence:
>908_residues MNRKTGVILPLTMILLLTVSILAISMLSRSSATAKILVEKISKSELQMNAGNIFLANLAYIQEKYLEHGALLIDEYTEYT KLFSAPYWYTNFLSSFNEATLEGQGWTEFFGMFYEDRFYIPGDDLRKVFQKLAEGKNIDLVMIPHKKFPSSLLTIVQVEY HGIKGYCWGVVSPRYFSNWSRFELESNTTAYWSPGSIITGPTFFGSAGLGGAGNGGLRISAIVPPDPDNVSEYGPIFNGE SWYESWNMNLSLNPDLSERRRIFVDQDNDGDYETNLGIKTYAIYEDGSRKWIYLSDFTQVIVATDYKTENGNLKVKGEIK DFIPHGVSGDFSAEFLPWYLPSGARKVDQESIEQLETRFNEIADYYDTQYGNVSPLEDILTTSYFATQTMLQAVNSFGIH FKDTERNLGSGDKTVVESDIQNITRQLDETNVINDIIDDVREWIDSDEKLRESVNYDLGYPINSRSFLSDGDIEYWLENF VLIELSTPEVIVEQKKIITERQTTGSVTIVDFASNVSISGDVVTGNTLKTILQRDDIPLNLSEKYSVLEFSWPREVRIGN GGTIRERYRIATRKALSYSKAPVDVNLIYHGQTIRRIWWWIWWKPKIWTKTGLTAYVPSEVDSWSDWSYSGWSGWETIAG GRGRGHTHTYTADVDFYLITDPGNFDNINFSSIAVYKVDSDDEGAYPSFTSTPVEVVHRGLMVVEDNVEIGGAGITGGIG KNLGREATVIDGKFTILSREGDISTNGDIVYNDMLNDPTFRNYFITPGRPFNPDYDPNDAVNNTQTDDMLNLVVADGTIK LPYHNTREWYNKVKNIKITANLFAFGKGSRGQIIIEGYQRYAENMGYRHLFGTMVDRDSGAAGIIDRWGNITGFRSRNYY DERLYGNEDMPFATPESNLIRATGISFK
Sequences:
>Translated_908_residues MNRKTGVILPLTMILLLTVSILAISMLSRSSATAKILVEKISKSELQMNAGNIFLANLAYIQEKYLEHGALLIDEYTEYT KLFSAPYWYTNFLSSFNEATLEGQGWTEFFGMFYEDRFYIPGDDLRKVFQKLAEGKNIDLVMIPHKKFPSSLLTIVQVEY HGIKGYCWGVVSPRYFSNWSRFELESNTTAYWSPGSIITGPTFFGSAGLGGAGNGGLRISAIVPPDPDNVSEYGPIFNGE SWYESWNMNLSLNPDLSERRRIFVDQDNDGDYETNLGIKTYAIYEDGSRKWIYLSDFTQVIVATDYKTENGNLKVKGEIK DFIPHGVSGDFSAEFLPWYLPSGARKVDQESIEQLETRFNEIADYYDTQYGNVSPLEDILTTSYFATQTMLQAVNSFGIH FKDTERNLGSGDKTVVESDIQNITRQLDETNVINDIIDDVREWIDSDEKLRESVNYDLGYPINSRSFLSDGDIEYWLENF VLIELSTPEVIVEQKKIITERQTTGSVTIVDFASNVSISGDVVTGNTLKTILQRDDIPLNLSEKYSVLEFSWPREVRIGN GGTIRERYRIATRKALSYSKAPVDVNLIYHGQTIRRIWWWIWWKPKIWTKTGLTAYVPSEVDSWSDWSYSGWSGWETIAG GRGRGHTHTYTADVDFYLITDPGNFDNINFSSIAVYKVDSDDEGAYPSFTSTPVEVVHRGLMVVEDNVEIGGAGITGGIG KNLGREATVIDGKFTILSREGDISTNGDIVYNDMLNDPTFRNYFITPGRPFNPDYDPNDAVNNTQTDDMLNLVVADGTIK LPYHNTREWYNKVKNIKITANLFAFGKGSRGQIIIEGYQRYAENMGYRHLFGTMVDRDSGAAGIIDRWGNITGFRSRNYY DERLYGNEDMPFATPESNLIRATGISFK >Mature_908_residues MNRKTGVILPLTMILLLTVSILAISMLSRSSATAKILVEKISKSELQMNAGNIFLANLAYIQEKYLEHGALLIDEYTEYT KLFSAPYWYTNFLSSFNEATLEGQGWTEFFGMFYEDRFYIPGDDLRKVFQKLAEGKNIDLVMIPHKKFPSSLLTIVQVEY HGIKGYCWGVVSPRYFSNWSRFELESNTTAYWSPGSIITGPTFFGSAGLGGAGNGGLRISAIVPPDPDNVSEYGPIFNGE SWYESWNMNLSLNPDLSERRRIFVDQDNDGDYETNLGIKTYAIYEDGSRKWIYLSDFTQVIVATDYKTENGNLKVKGEIK DFIPHGVSGDFSAEFLPWYLPSGARKVDQESIEQLETRFNEIADYYDTQYGNVSPLEDILTTSYFATQTMLQAVNSFGIH FKDTERNLGSGDKTVVESDIQNITRQLDETNVINDIIDDVREWIDSDEKLRESVNYDLGYPINSRSFLSDGDIEYWLENF VLIELSTPEVIVEQKKIITERQTTGSVTIVDFASNVSISGDVVTGNTLKTILQRDDIPLNLSEKYSVLEFSWPREVRIGN GGTIRERYRIATRKALSYSKAPVDVNLIYHGQTIRRIWWWIWWKPKIWTKTGLTAYVPSEVDSWSDWSYSGWSGWETIAG GRGRGHTHTYTADVDFYLITDPGNFDNINFSSIAVYKVDSDDEGAYPSFTSTPVEVVHRGLMVVEDNVEIGGAGITGGIG KNLGREATVIDGKFTILSREGDISTNGDIVYNDMLNDPTFRNYFITPGRPFNPDYDPNDAVNNTQTDDMLNLVVADGTIK LPYHNTREWYNKVKNIKITANLFAFGKGSRGQIIIEGYQRYAENMGYRHLFGTMVDRDSGAAGIIDRWGNITGFRSRNYY DERLYGNEDMPFATPESNLIRATGISFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102863; Mature: 102863
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKTGVILPLTMILLLTVSILAISMLSRSSATAKILVEKISKSELQMNAGNIFLANLAY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCEEEEHHHH IQEKYLEHGALLIDEYTEYTKLFSAPYWYTNFLSSFNEATLEGQGWTEFFGMFYEDRFYI HHHHHHHCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHCCEEEC PGDDLRKVFQKLAEGKNIDLVMIPHKKFPSSLLTIVQVEYHGIKGYCWGVVSPRYFSNWS CCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEEEEEECCCEEEEEECCCHHHCCCC RFELESNTTAYWSPGSIITGPTFFGSAGLGGAGNGGLRISAIVPPDPDNVSEYGPIFNGE EEEECCCCEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCC SWYESWNMNLSLNPDLSERRRIFVDQDNDGDYETNLGIKTYAIYEDGSRKWIYLSDFTQV HHHHCCCCEEEECCCHHHCCEEEEECCCCCCEEECCCEEEEEEEECCCCEEEEEECCEEE IVATDYKTENGNLKVKGEIKDFIPHGVSGDFSAEFLPWYLPSGARKVDQESIEQLETRFN EEEEEEEECCCCEEEEECHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH EIADYYDTQYGNVSPLEDILTTSYFATQTMLQAVNSFGIHFKDTERNLGSGDKTVVESDI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH QNITRQLDETNVINDIIDDVREWIDSDEKLRESVNYDLGYPINSRSFLSDGDIEYWLENF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCE VLIELSTPEVIVEQKKIITERQTTGSVTIVDFASNVSISGDVVTGNTLKTILQRDDIPLN EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCEEECHHHHHHHHCCCCCCC LSEKYSVLEFSWPREVRIGNGGTIRERYRIATRKALSYSKAPVDVNLIYHGQTIRRIWWW CCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEE IWWKPKIWTKTGLTAYVPSEVDSWSDWSYSGWSGWETIAGGRGRGHTHTYTADVDFYLIT EEECCEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEEEE DPGNFDNINFSSIAVYKVDSDDEGAYPSFTSTPVEVVHRGLMVVEDNVEIGGAGITGGIG CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCEEEEECCCEECCCCCCCCCC KNLGREATVIDGKFTILSREGDISTNGDIVYNDMLNDPTFRNYFITPGRPFNPDYDPNDA CCCCCCEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCC VNNTQTDDMLNLVVADGTIKLPYHNTREWYNKVKNIKITANLFAFGKGSRGQIIIEGYQR CCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHCCEEEEEEEEEECCCCCCCEEEHHHHH YAENMGYRHLFGTMVDRDSGAAGIIDRWGNITGFRSRNYYDERLYGNEDMPFATPESNLI HHHCCCHHHHHHHHEECCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEE RATGISFK EECCCCCC >Mature Secondary Structure MNRKTGVILPLTMILLLTVSILAISMLSRSSATAKILVEKISKSELQMNAGNIFLANLAY CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEECCCCEEEEHHHH IQEKYLEHGALLIDEYTEYTKLFSAPYWYTNFLSSFNEATLEGQGWTEFFGMFYEDRFYI HHHHHHHCCCEEEHHHHHHHHHHCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHCCEEEC PGDDLRKVFQKLAEGKNIDLVMIPHKKFPSSLLTIVQVEYHGIKGYCWGVVSPRYFSNWS CCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHEEEEEEEEECCCEEEEEECCCHHHCCCC RFELESNTTAYWSPGSIITGPTFFGSAGLGGAGNGGLRISAIVPPDPDNVSEYGPIFNGE EEEECCCCEEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHCCCCCCCC SWYESWNMNLSLNPDLSERRRIFVDQDNDGDYETNLGIKTYAIYEDGSRKWIYLSDFTQV HHHHCCCCEEEECCCHHHCCEEEEECCCCCCEEECCCEEEEEEEECCCCEEEEEECCEEE IVATDYKTENGNLKVKGEIKDFIPHGVSGDFSAEFLPWYLPSGARKVDQESIEQLETRFN EEEEEEEECCCCEEEEECHHHHCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH EIADYYDTQYGNVSPLEDILTTSYFATQTMLQAVNSFGIHFKDTERNLGSGDKTVVESDI HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHH QNITRQLDETNVINDIIDDVREWIDSDEKLRESVNYDLGYPINSRSFLSDGDIEYWLENF HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEECCE VLIELSTPEVIVEQKKIITERQTTGSVTIVDFASNVSISGDVVTGNTLKTILQRDDIPLN EEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCEEECHHHHHHHHCCCCCCC LSEKYSVLEFSWPREVRIGNGGTIRERYRIATRKALSYSKAPVDVNLIYHGQTIRRIWWW CCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEE IWWKPKIWTKTGLTAYVPSEVDSWSDWSYSGWSGWETIAGGRGRGHTHTYTADVDFYLIT EEECCEEEECCCCEEECCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEEEEEEEEE DPGNFDNINFSSIAVYKVDSDDEGAYPSFTSTPVEVVHRGLMVVEDNVEIGGAGITGGIG CCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCEEEEECCCEECCCCCCCCCC KNLGREATVIDGKFTILSREGDISTNGDIVYNDMLNDPTFRNYFITPGRPFNPDYDPNDA CCCCCCEEEECCEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCC VNNTQTDDMLNLVVADGTIKLPYHNTREWYNKVKNIKITANLFAFGKGSRGQIIIEGYQR CCCCCCCCEEEEEEECCEEECCCCCHHHHHHHHCCEEEEEEEEEECCCCCCCEEEHHHHH YAENMGYRHLFGTMVDRDSGAAGIIDRWGNITGFRSRNYYDERLYGNEDMPFATPESNLI HHHCCCHHHHHHHHEECCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEE RATGISFK EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA