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The map label for this gene is yccM [C]

Identifier: 239616820

GI number: 239616820

Start: 436662

End: 437558

Strand: Reverse

Name: yccM [C]

Synonym: Kole_0413

Alternate gene names: 239616820

Gene position: 437558-436662 (Counterclockwise)

Preceding gene: 239616822

Following gene: 239616819

Centisome position: 19.01

GC content: 38.13

Gene sequence:

>897_bases
ATGAAGAATATAAGGAGATTTTTTTTAGTAGTGCTAGTGATTTTTTTCACGTATATACTCTTTGCCGATTCATTCCCAGG
TGATCTTGACTTCAATCTTCCTGGAAGTCAAACACAAATCCAGGATCAGGTTCAACAGTCTTCTTACTGGAAACATGACC
TGTTGTGGAAGACACTCGCTGTTGGTGGCCTTTCAGCGATCGGAATCTGGATAACTTTGAGAAGAGCCTTCAAGTACAGA
AAAGTTCTCATGATTGTTTCTATAGCAATTTTGGGGTTCTTGTTTGGAGGTGTGCTTTGTCCTGTCACGACAGTACAAAA
CGTGCTCTTTAAGTATGAGACCGCTTATCTTCTGATGTTTCTGATACCAGTGATTATAAGTTTTATCTTTGGCAGGATTT
ATTGTGGATATGTTTGTCCTTTTGGAGGAGTACAGGAATTACTTTACATGAAAAAATATGGCAAGAAAGTTCCGTACAAA
ACAGATAAACTTTTGAGGTATGTGAAATACATTGTTCTTGCTATCGTCGTAATAGCTGCACTTTCAGCCGGGAGGGTTTT
CAGCGGATTTACTCCCTTCAAAAGTTTGTTCACTTTTGAATTCGCGATAATTGGTATTCTTATAACCACTGTATTTGCTA
TTCTGTCAATTTTCATCTACAGGCCTTTCTGTAAATATCTTTGCCCTTACGGAGCTTTGATGGCTTTTGCTTCAAGATTC
AGTATATTCAAAGTGAAGAAAAATGATAGTTGTGTCAACTGTAATCTGTGTTTGAAAAAGTGCCCTATGGGTGCTATGGA
AACACCTGGTGAAGTTTCAGATGAATGTATAATGTGCGGCGAATGTTGTTGCGCTTGCCCAAAAAATTCCTTAGAGATTA
AATCTGGAGGTGATTGA

Upstream 100 bases:

>100_bases
AGGAGCAACAAAGAAAAAGCATTTTTTCTAAGTGTTTTCTAAAGGAGTTTTAAGCAAATTCTAAGTTTAAGGTTTTAGAC
TGCTTTTGGAGGTGAGAATT

Downstream 100 bases:

>100_bases
TATGAAAAAGGTATTCCTGTTCACTATTTTGCTGGTGTCAACATTTGCGCTTTCCTGTGTTTTCAGCTTTGAACCAGAGG
TAGTATCTGGTAAAGTAGGC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKNIRRFFLVVLVIFFTYILFADSFPGDLDFNLPGSQTQIQDQVQQSSYWKHDLLWKTLAVGGLSAIGIWITLRRAFKYR
KVLMIVSIAILGFLFGGVLCPVTTVQNVLFKYETAYLLMFLIPVIISFIFGRIYCGYVCPFGGVQELLYMKKYGKKVPYK
TDKLLRYVKYIVLAIVVIAALSAGRVFSGFTPFKSLFTFEFAIIGILITTVFAILSIFIYRPFCKYLCPYGALMAFASRF
SIFKVKKNDSCVNCNLCLKKCPMGAMETPGEVSDECIMCGECCCACPKNSLEIKSGGD

Sequences:

>Translated_298_residues
MKNIRRFFLVVLVIFFTYILFADSFPGDLDFNLPGSQTQIQDQVQQSSYWKHDLLWKTLAVGGLSAIGIWITLRRAFKYR
KVLMIVSIAILGFLFGGVLCPVTTVQNVLFKYETAYLLMFLIPVIISFIFGRIYCGYVCPFGGVQELLYMKKYGKKVPYK
TDKLLRYVKYIVLAIVVIAALSAGRVFSGFTPFKSLFTFEFAIIGILITTVFAILSIFIYRPFCKYLCPYGALMAFASRF
SIFKVKKNDSCVNCNLCLKKCPMGAMETPGEVSDECIMCGECCCACPKNSLEIKSGGD
>Mature_298_residues
MKNIRRFFLVVLVIFFTYILFADSFPGDLDFNLPGSQTQIQDQVQQSSYWKHDLLWKTLAVGGLSAIGIWITLRRAFKYR
KVLMIVSIAILGFLFGGVLCPVTTVQNVLFKYETAYLLMFLIPVIISFIFGRIYCGYVCPFGGVQELLYMKKYGKKVPYK
TDKLLRYVKYIVLAIVVIAALSAGRVFSGFTPFKSLFTFEFAIIGILITTVFAILSIFIYRPFCKYLCPYGALMAFASRF
SIFKVKKNDSCVNCNLCLKKCPMGAMETPGEVSDECIMCGECCCACPKNSLEIKSGGD

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1787226, Length=204, Percent_Identity=33.8235294117647, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33599; Mature: 33599

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIRRFFLVVLVIFFTYILFADSFPGDLDFNLPGSQTQIQDQVQQSSYWKHDLLWKTLA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
VGGLSAIGIWITLRRAFKYRKVLMIVSIAILGFLFGGVLCPVTTVQNVLFKYETAYLLMF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPVIISFIFGRIYCGYVCPFGGVQELLYMKKYGKKVPYKTDKLLRYVKYIVLAIVVIAA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
LSAGRVFSGFTPFKSLFTFEFAIIGILITTVFAILSIFIYRPFCKYLCPYGALMAFASRF
HHCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SIFKVKKNDSCVNCNLCLKKCPMGAMETPGEVSDECIMCGECCCACPKNSLEIKSGGD
HHEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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HHEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]