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The map label for this gene is ygeR [H]

Identifier: 239616724

GI number: 239616724

Start: 339239

End: 340099

Strand: Reverse

Name: ygeR [H]

Synonym: Kole_0317

Alternate gene names: 239616724

Gene position: 340099-339239 (Counterclockwise)

Preceding gene: 239616725

Following gene: 239616723

Centisome position: 14.77

GC content: 40.42

Gene sequence:

>861_bases
GTGAAGTTGAAGCACATAATGCTGTTAGTTTTTATAATTGCTGTTGCACATTTATACGCCTATATGCTATTAACTTATGA
AGTTCAACCTGGAGATACACTTTACGAAATTGCCAGAAGATTTGACGTACATATATCTACCATCCTTGATTTCAATGATA
TTGAAAATCCGAGGCTTTTGCGTGTTGGAGAACAGCTTATTATTCCTCAACCTGATGGGCTCCTTTATGAAGTAAAAAAA
GGTGATACCTTGACCTACATTGCTAAACTGTTTTTTACGCCATTGGAACCGCTTTTGAAGGCTAATAACCTTACCAGAGA
TAGCTGGGTGTTTCCAGGACAGAAGATTTTTATTCCAGCATCCATTATTAACGTTTTTGCTTATGAACCAATAGAAAAAC
CTTTGAGGTGGCCTGTATACGGATATATAAGTTCTTATTATGGAATGAGAATTCATCCTATCACCGGCCAAAGAAAATTT
CATACTGGTTTGGACATTGCCGCTCCGGAAGGAGCACCAATTTTTGCAGCTGGAAGAGGAACAGTTGTGTTTGCAGGTTT
TGACAAAGGGTATGGTTATATGGTTGAAATAATGCATGATGACGGTGAAACGGTAACGAGATACGCACATATGAGTCACA
TAAGTGTTTACGTTGGGCAACATGTTTATGCTGGAGATCTTCTCGGGAGAGTGGGTAGCACCGGATTAGCAACGGGGCCT
CACGTTCATTTTGAGGTAAGGCGGCTCGCTGCTGACGGAAAGTCTTATCCACGTGATCCAATAGCTTTTTTGCCTACAAG
AGACCTTATTTACTATGTTAGAGAATACAAACACGATGGAACTCAGAGTGGTGGGAAGTGA

Upstream 100 bases:

>100_bases
TTGGTAGAGCGATTTTCGGGTTTTCTTCTATTTATACCTTTCCATTTGGTATAATCATTGTTGTTTTGGTGTTCTTAATT
AGTCGTGGAGGTGTTGAAAG

Downstream 100 bases:

>100_bases
TATGAAAAAAATACTTGTTAGTGCTTGTCTTTTAGGGATTAACTGTACTTATTGCGGGAAAAACAGTTTGAGTTTGAATG
TTCTTCAGTTAACCAAAGAT

Product: Peptidase M23

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLKHIMLLVFIIAVAHLYAYMLLTYEVQPGDTLYEIARRFDVHISTILDFNDIENPRLLRVGEQLIIPQPDGLLYEVKK
GDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPASIINVFAYEPIEKPLRWPVYGYISSYYGMRIHPITGQRKF
HTGLDIAAPEGAPIFAAGRGTVVFAGFDKGYGYMVEIMHDDGETVTRYAHMSHISVYVGQHVYAGDLLGRVGSTGLATGP
HVHFEVRRLAADGKSYPRDPIAFLPTRDLIYYVREYKHDGTQSGGK

Sequences:

>Translated_286_residues
MKLKHIMLLVFIIAVAHLYAYMLLTYEVQPGDTLYEIARRFDVHISTILDFNDIENPRLLRVGEQLIIPQPDGLLYEVKK
GDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPASIINVFAYEPIEKPLRWPVYGYISSYYGMRIHPITGQRKF
HTGLDIAAPEGAPIFAAGRGTVVFAGFDKGYGYMVEIMHDDGETVTRYAHMSHISVYVGQHVYAGDLLGRVGSTGLATGP
HVHFEVRRLAADGKSYPRDPIAFLPTRDLIYYVREYKHDGTQSGGK
>Mature_286_residues
MKLKHIMLLVFIIAVAHLYAYMLLTYEVQPGDTLYEIARRFDVHISTILDFNDIENPRLLRVGEQLIIPQPDGLLYEVKK
GDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPASIINVFAYEPIEKPLRWPVYGYISSYYGMRIHPITGQRKF
HTGLDIAAPEGAPIFAAGRGTVVFAGFDKGYGYMVEIMHDDGETVTRYAHMSHISVYVGQHVYAGDLLGRVGSTGLATGP
HVHFEVRRLAADGKSYPRDPIAFLPTRDLIYYVREYKHDGTQSGGK

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082174, Length=244, Percent_Identity=29.5081967213115, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI87081989, Length=115, Percent_Identity=40.8695652173913, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789099, Length=133, Percent_Identity=34.5864661654135, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 32327; Mature: 32327

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKHIMLLVFIIAVAHLYAYMLLTYEVQPGDTLYEIARRFDVHISTILDFNDIENPRLL
CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCEEEEEEEECCCCCCCEEE
RVGEQLIIPQPDGLLYEVKKGDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPA
EECCEEEEECCCCCEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCCEEEEHH
SIINVFAYEPIEKPLRWPVYGYISSYYGMRIHPITGQRKFHTGLDIAAPEGAPIFAAGRG
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCEECCCCEEECCCCCEEEEECCC
TVVFAGFDKGYGYMVEIMHDDGETVTRYAHMSHISVYVGQHVYAGDLLGRVGSTGLATGP
EEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHEEEEECCEEHHHHHHHHCCCCCCCCCC
HVHFEVRRLAADGKSYPRDPIAFLPTRDLIYYVREYKHDGTQSGGK
EEEEEEEEEHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLKHIMLLVFIIAVAHLYAYMLLTYEVQPGDTLYEIARRFDVHISTILDFNDIENPRLL
CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCEEEEEEEECCCCCCCEEE
RVGEQLIIPQPDGLLYEVKKGDTLTYIAKLFFTPLEPLLKANNLTRDSWVFPGQKIFIPA
EECCEEEEECCCCCEEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCCCEECCCCEEEEHH
SIINVFAYEPIEKPLRWPVYGYISSYYGMRIHPITGQRKFHTGLDIAAPEGAPIFAAGRG
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCEECCCCEEECCCCCEEEEECCC
TVVFAGFDKGYGYMVEIMHDDGETVTRYAHMSHISVYVGQHVYAGDLLGRVGSTGLATGP
EEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHEEEEECCEEHHHHHHHHCCCCCCCCCC
HVHFEVRRLAADGKSYPRDPIAFLPTRDLIYYVREYKHDGTQSGGK
EEEEEEEEEHHCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]