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The map label for this gene is yfeT [C]

Identifier: 239616702

GI number: 239616702

Start: 320597

End: 321433

Strand: Reverse

Name: yfeT [C]

Synonym: Kole_0295

Alternate gene names: 239616702

Gene position: 321433-320597 (Counterclockwise)

Preceding gene: 239616703

Following gene: 239616699

Centisome position: 13.96

GC content: 39.9

Gene sequence:

>837_bases
ATGAAAAAGAGTTTTTTGAATCAGTTTAACGAAAGGGTTGGAGCTCTCACATCATCTGAAGAAAAAGTTGCCAGATACAT
AAAAGAGAACCCATTAAAAGTTGTTAATATGTCCATCCAGTCGCTGGCAAATGAATGTTTTGTCGTTCCTTCTACTGTGA
TAAAGACGGCAAAAAAATTGGGCTTTTCTGGTTTTTCCGAGTTAAAAATCGCACTTGCTGCTGAATTGGATAAAGCTGCT
ATTACGGGTCTTGATTCGGACATTCTCAGTAACACCTTCAAACGATACGCAGAATTTGTTCAGGAACTCATTGAACAAGC
TTCGGTGCGGTTGTCTGAGGAACTTCTTAATGAAGCTGCTCGGATTGTATTGGAAGCTAATAAGATTGACATTTATTCCT
TTGGATTTGATAGTATTGCAGGGCTTGACCTTTATCTTAAACTCGTTCAGATCGGCAAAACGACAGCTCATTATGAGAAT
GGATACATGCAGATGATCTCCGCAACGTACCTTGGAACAGAAGATGCTGTGATAGCTATATCAAGTACGGGAAGTTCAAA
GGACCTTTTTGATGCAGTTAAGCGGGCAATAGAATCTGGAGCGAAGGTAATAGTTATAGCACCATCGAGTTCAATGCTTG
CCGGTCTGGAAACGGTCTATCTGGATACGTACTTTTCAACATTGGTTCTTCCCGAAGGTGGTATTGCAACGAGGTTGGTA
CAGTTGTTTTTGATCGACCAGCTTTATCTCCGGATCTTGAAAATGGATGAAAAGAGTTCAGAGAGGTACGAGAAATTTCA
AAATGTTCTTGAATACAAAAGAAAAGCCCCAAAATAA

Upstream 100 bases:

>100_bases
CCACATTATTTAGAAATCGTTCCGGAAAGAATTCAGGAAATCATGAAAGCCAGTTACATACTTCTCAAATATGGTATATT
GCGACCTCTGGAGGAATAAG

Downstream 100 bases:

>100_bases
AAAAGGGGCTAAAGCCCCTTTTTTATTACGAAAAGTTTTATTCCTTTACAAGACCTCTCCAGATTATCTCCTTTACTGTT
TCAATACTTTTGGGATTATC

Product: RpiR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKKSFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFSGFSELKIALAAELDKAA
ITGLDSDILSNTFKRYAEFVQELIEQASVRLSEELLNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYEN
GYMQMISATYLGTEDAVIAISSTGSSKDLFDAVKRAIESGAKVIVIAPSSSMLAGLETVYLDTYFSTLVLPEGGIATRLV
QLFLIDQLYLRILKMDEKSSERYEKFQNVLEYKRKAPK

Sequences:

>Translated_278_residues
MKKSFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFSGFSELKIALAAELDKAA
ITGLDSDILSNTFKRYAEFVQELIEQASVRLSEELLNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYEN
GYMQMISATYLGTEDAVIAISSTGSSKDLFDAVKRAIESGAKVIVIAPSSSMLAGLETVYLDTYFSTLVLPEGGIATRLV
QLFLIDQLYLRILKMDEKSSERYEKFQNVLEYKRKAPK
>Mature_278_residues
MKKSFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKLGFSGFSELKIALAAELDKAA
ITGLDSDILSNTFKRYAEFVQELIEQASVRLSEELLNEAARIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYEN
GYMQMISATYLGTEDAVIAISSTGSSKDLFDAVKRAIESGAKVIVIAPSSSMLAGLETVYLDTYFSTLVLPEGGIATRLV
QLFLIDQLYLRILKMDEKSSERYEKFQNVLEYKRKAPK

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1788767, Length=286, Percent_Identity=26.5734265734266, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI87082369, Length=272, Percent_Identity=24.6323529411765, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082130, Length=209, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 30878; Mature: 30878

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCEECHHHHHHHHHHH
GFSGFSELKIALAAELDKAAITGLDSDILSNTFKRYAEFVQELIEQASVRLSEELLNEAA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATYLGTEDAVIAI
HHHEECCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCEEEE
SSTGSSKDLFDAVKRAIESGAKVIVIAPSSSMLAGLETVYLDTYFSTLVLPEGGIATRLV
ECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QLFLIDQLYLRILKMDEKSSERYEKFQNVLEYKRKAPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKSFLNQFNERVGALTSSEEKVARYIKENPLKVVNMSIQSLANECFVVPSTVIKTAKKL
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCEECHHHHHHHHHHH
GFSGFSELKIALAAELDKAAITGLDSDILSNTFKRYAEFVQELIEQASVRLSEELLNEAA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIVLEANKIDIYSFGFDSIAGLDLYLKLVQIGKTTAHYENGYMQMISATYLGTEDAVIAI
HHHEECCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHCCCCCCEEEE
SSTGSSKDLFDAVKRAIESGAKVIVIAPSSSMLAGLETVYLDTYFSTLVLPEGGIATRLV
ECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
QLFLIDQLYLRILKMDEKSSERYEKFQNVLEYKRKAPK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]