| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is glgP [H]
Identifier: 239616649
GI number: 239616649
Start: 268540
End: 271104
Strand: Reverse
Name: glgP [H]
Synonym: Kole_0242
Alternate gene names: 239616649
Gene position: 271104-268540 (Counterclockwise)
Preceding gene: 239616650
Following gene: 239616640
Centisome position: 11.78
GC content: 44.52
Gene sequence:
>2565_bases ATGTACTTCCTGGAAAAAATCACTGTGGTTCCAAAGCTTCCCGAGAAATTGAAACGTCTCGAGGAACTTGCTTACAATCT ATGGTGGACGTGGAACCCGAAAGTAGAAGCTCTTTTCCGTTCGATGGATTCAGAACTCTGGTACGAGGTAAAGAGAAGTC CAGTAAAACTCATAAGGCGAATTAACCAGCAGAAACTCAACGAGCTTGCAAAGAACGAAAAGTTTCTAAAAGAATATGCC GAAGTTGTTGCAGAATTCGATGCGTATATGAACAACAGCAATACATGGATGGACAAAAATCACCCCGACAGAAAAAACGA GCTTGTAGCGTATTTTTGTGCTGAATACGGCCTTCACGAATCTTTCCCTATCTATTCTGGGGGGCTGGGGATCCTTGCAG GAGACCACCTGAAAACCGCCAGCGATCTTGGACTTAACATCGTTGGGGTTGGTTTGTTGTATCGTCATGGTTACTTTGTG CAAACCATAGACAAAACAGGCTGGCAGCATTCTGAATTTCCCAGTTATGATTTTTCCGACTTTCCGGTAGTATCCGCAAC GAATGAAAAAGGTGAAGAGATTTATGTAAACATTGAATTTCCCGGAAGAAAGGTCTGGGCAAAGGTCTGGAAAGCGATGG TTGGGCGTTCAGTCCTTCTGCTTCTTGATACGGATGTTCCCATGAACGATCCCGAAGACAGAAAGATTACAGCCCAGCTT TACGGCGGAAATCGCGAGACGCGAATTCAGCAGGAACTCGTCCTCGGAATTGGTGGTGTCAGGGCTCTCAGGATGCTCGG TTACAATCCGAAGGTATGGCACATGAACGAAGGGCATGCTGCCTTTCTTGCATTGGAAAGGATCAGAGAGTATGTTCAGG GCAAAAAGCTCGACTTTAGAACAGCCATAGAATTGACCCGCGCCACCAACATTTTCACAACGCATACACCTGTCCCCGCC GGTAACGATGTCTTTGACCTGAGCCTCATAGACAAATACTTCTCAGAATTCTGGCCAAAACTGAATGCTTCAAGACAGGA ATTCATAGACCTTGGTCTCGAAAGAGGTGTTGGGGGCCATCAGCAATTCAGCATGACCGTTCTTGCCCTGAGATTATCAA GTCTGGCAAACGGTGTCAGCAAACTCCACGGAGAGGTTTCCAGAAAATTGTGGAGCCATGTATTTCCGGAGTATCCTGCC GTTGAAGTGCCCATAACTCACGTGACGAATGGTGTTCACATGTGGACGTGGTTGAACCGCGACCTCAAGAAACTCTTCGA TAAGTATTTCCCGAAAGGCTGGGAAGAGAAGATAACGGATTCTGAGATATGGGAATATGTCGATAAGGTTCCTGACGAAG AACTCTGGGAAGTTCATATGAAACTAAAGGAAAGAATGAAAGTATTCCTTCAGGGCCGTATAAGACGACAGCGTTTGAGG TGCGGAGAAACAATAGAAGAACTGATGGAAGTCGATAAACTCCTACCTGAAAAGATTCTTACGATAGGCTTCGCAAGGAG ATTCGCCACATATAAGAGAGCTACCCTCATTTTGAAAGATATCGAAAGATTAAAGATGATACTCACAGATAACGAACGCC CGGTACAATTTGTCTTTGCAGGTAAAGCCCATCCAGCTGATGAGCCCGGGAAAGAACTCATACGTCAGTTATACCAGTTG TCAAGGATGCCGGAATTCAAGAATAGAATAATCATACTCGAAAACTACGATATGAATATTGCCCGTCATATGATTTCTGG CGTCGATGTCTGGATGAACAACCCCCGAAGACCTCACGAAGCAAGCGGTACCAGTGGCCAGAAAGCTGCTATGAATGGCG TCATAAATTTCAGTGTTATGGATGGATGGTGGGTCGAAGGTTACAACGGCGAAAACGGCTGGACAATTGGGGATAACAGA GATTACGACGATAACGAACTTCAGGACCGTATAGACAGCGTTTCTATCTATAGTACCCTCGAAAAGGAAATCATCCCGCT TTATTACAAAAGAGATGAAAATGGTATTCCTCGAGAGTGGGTCAAGAAAATGAAAAACTCCATAAAGTCCGTAGCCCTCA ATTTTAACAGCCACAGGATGCTTATAGACTACATAGAAAATCTCTACCTAAAGGGTGTCGAATACTATGAATTCATGAAC GCTGATTCTTTCAAAAAGGCCTTAGAGATAGCAAGATGGCACCAACGGCTCCTTCAAAACTGGGGCTACATAAGAATAAA ACCAAATCTTCTCAGGCCCAGCTCAGGGGACAGTTTGAGAGTTGGAAGCGAAATTTCGCTGACAGCCAACGTGTATCTTG GGGAATTGAAACCGGAAGAAGTTCGGGTGGAAATATATGTTGCCATGCTGAACGAAGATGGAGAAATAGTCAAATTCAAA ACCTACCCGATGAAACTCGAAAAAGAGGATGTCCATGGTGAATATGTTTATACGGGCAAGTTCACAGTGGAAGAAGAGGG TAAAATGGTCTACACCATCAGGGTAATACCCAACCCTGAAAATCTTCCTAATGGTCATTTCTTACCAATGGCTAAATGGA TATAG
Upstream 100 bases:
>100_bases ATTTCCCCTTCAGAGGCAAATAGACGTGGAATTCTATACAAATATACGTTATAATCATAAGCGGACGCCCTTTTTCACCT GATTGGGAGGAGGAGTAGAG
Downstream 100 bases:
>100_bases GATTCAGAGAGAGCAATAAAAAGCGCGGGGAAAAACCCCGCGCTTTTTCTATTACATCAAAAAACCGAAAAATCACTTAA GGACTTCTCAAAATCTCCGG
Product: alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MYFLEKITVVPKLPEKLKRLEELAYNLWWTWNPKVEALFRSMDSELWYEVKRSPVKLIRRINQQKLNELAKNEKFLKEYA EVVAEFDAYMNNSNTWMDKNHPDRKNELVAYFCAEYGLHESFPIYSGGLGILAGDHLKTASDLGLNIVGVGLLYRHGYFV QTIDKTGWQHSEFPSYDFSDFPVVSATNEKGEEIYVNIEFPGRKVWAKVWKAMVGRSVLLLLDTDVPMNDPEDRKITAQL YGGNRETRIQQELVLGIGGVRALRMLGYNPKVWHMNEGHAAFLALERIREYVQGKKLDFRTAIELTRATNIFTTHTPVPA GNDVFDLSLIDKYFSEFWPKLNASRQEFIDLGLERGVGGHQQFSMTVLALRLSSLANGVSKLHGEVSRKLWSHVFPEYPA VEVPITHVTNGVHMWTWLNRDLKKLFDKYFPKGWEEKITDSEIWEYVDKVPDEELWEVHMKLKERMKVFLQGRIRRQRLR CGETIEELMEVDKLLPEKILTIGFARRFATYKRATLILKDIERLKMILTDNERPVQFVFAGKAHPADEPGKELIRQLYQL SRMPEFKNRIIILENYDMNIARHMISGVDVWMNNPRRPHEASGTSGQKAAMNGVINFSVMDGWWVEGYNGENGWTIGDNR DYDDNELQDRIDSVSIYSTLEKEIIPLYYKRDENGIPREWVKKMKNSIKSVALNFNSHRMLIDYIENLYLKGVEYYEFMN ADSFKKALEIARWHQRLLQNWGYIRIKPNLLRPSSGDSLRVGSEISLTANVYLGELKPEEVRVEIYVAMLNEDGEIVKFK TYPMKLEKEDVHGEYVYTGKFTVEEEGKMVYTIRVIPNPENLPNGHFLPMAKWI
Sequences:
>Translated_854_residues MYFLEKITVVPKLPEKLKRLEELAYNLWWTWNPKVEALFRSMDSELWYEVKRSPVKLIRRINQQKLNELAKNEKFLKEYA EVVAEFDAYMNNSNTWMDKNHPDRKNELVAYFCAEYGLHESFPIYSGGLGILAGDHLKTASDLGLNIVGVGLLYRHGYFV QTIDKTGWQHSEFPSYDFSDFPVVSATNEKGEEIYVNIEFPGRKVWAKVWKAMVGRSVLLLLDTDVPMNDPEDRKITAQL YGGNRETRIQQELVLGIGGVRALRMLGYNPKVWHMNEGHAAFLALERIREYVQGKKLDFRTAIELTRATNIFTTHTPVPA GNDVFDLSLIDKYFSEFWPKLNASRQEFIDLGLERGVGGHQQFSMTVLALRLSSLANGVSKLHGEVSRKLWSHVFPEYPA VEVPITHVTNGVHMWTWLNRDLKKLFDKYFPKGWEEKITDSEIWEYVDKVPDEELWEVHMKLKERMKVFLQGRIRRQRLR CGETIEELMEVDKLLPEKILTIGFARRFATYKRATLILKDIERLKMILTDNERPVQFVFAGKAHPADEPGKELIRQLYQL SRMPEFKNRIIILENYDMNIARHMISGVDVWMNNPRRPHEASGTSGQKAAMNGVINFSVMDGWWVEGYNGENGWTIGDNR DYDDNELQDRIDSVSIYSTLEKEIIPLYYKRDENGIPREWVKKMKNSIKSVALNFNSHRMLIDYIENLYLKGVEYYEFMN ADSFKKALEIARWHQRLLQNWGYIRIKPNLLRPSSGDSLRVGSEISLTANVYLGELKPEEVRVEIYVAMLNEDGEIVKFK TYPMKLEKEDVHGEYVYTGKFTVEEEGKMVYTIRVIPNPENLPNGHFLPMAKWI >Mature_854_residues MYFLEKITVVPKLPEKLKRLEELAYNLWWTWNPKVEALFRSMDSELWYEVKRSPVKLIRRINQQKLNELAKNEKFLKEYA EVVAEFDAYMNNSNTWMDKNHPDRKNELVAYFCAEYGLHESFPIYSGGLGILAGDHLKTASDLGLNIVGVGLLYRHGYFV QTIDKTGWQHSEFPSYDFSDFPVVSATNEKGEEIYVNIEFPGRKVWAKVWKAMVGRSVLLLLDTDVPMNDPEDRKITAQL YGGNRETRIQQELVLGIGGVRALRMLGYNPKVWHMNEGHAAFLALERIREYVQGKKLDFRTAIELTRATNIFTTHTPVPA GNDVFDLSLIDKYFSEFWPKLNASRQEFIDLGLERGVGGHQQFSMTVLALRLSSLANGVSKLHGEVSRKLWSHVFPEYPA VEVPITHVTNGVHMWTWLNRDLKKLFDKYFPKGWEEKITDSEIWEYVDKVPDEELWEVHMKLKERMKVFLQGRIRRQRLR CGETIEELMEVDKLLPEKILTIGFARRFATYKRATLILKDIERLKMILTDNERPVQFVFAGKAHPADEPGKELIRQLYQL SRMPEFKNRIIILENYDMNIARHMISGVDVWMNNPRRPHEASGTSGQKAAMNGVINFSVMDGWWVEGYNGENGWTIGDNR DYDDNELQDRIDSVSIYSTLEKEIIPLYYKRDENGIPREWVKKMKNSIKSVALNFNSHRMLIDYIENLYLKGVEYYEFMN ADSFKKALEIARWHQRLLQNWGYIRIKPNLLRPSSGDSLRVGSEISLTANVYLGELKPEEVRVEIYVAMLNEDGEIVKFK TYPMKLEKEDVHGEYVYTGKFTVEEEGKMVYTIRVIPNPENLPNGHFLPMAKWI
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI21361370, Length=512, Percent_Identity=24.21875, Blast_Score=85, Evalue=2e-16, Organism=Escherichia coli, GI48994936, Length=587, Percent_Identity=22.3168654173765, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI2367228, Length=432, Percent_Identity=23.6111111111111, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI78706832, Length=388, Percent_Identity=23.1958762886598, Blast_Score=71, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581010, Length=388, Percent_Identity=23.1958762886598, Blast_Score=71, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 99597; Mature: 99597
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFLEKITVVPKLPEKLKRLEELAYNLWWTWNPKVEALFRSMDSELWYEVKRSPVKLIRR CCHHHHEEECCCCHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHH INQQKLNELAKNEKFLKEYAEVVAEFDAYMNNSNTWMDKNHPDRKNELVAYFCAEYGLHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SFPIYSGGLGILAGDHLKTASDLGLNIVGVGLLYRHGYFVQTIDKTGWQHSEFPSYDFSD CCCCCCCCEEEEECCCCCCHHHCCCHHEEHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC FPVVSATNEKGEEIYVNIEFPGRKVWAKVWKAMVGRSVLLLLDTDVPMNDPEDRKITAQL CCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEE YGGNRETRIQQELVLGIGGVRALRMLGYNPKVWHMNEGHAAFLALERIREYVQGKKLDFR ECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHH TAIELTRATNIFTTHTPVPAGNDVFDLSLIDKYFSEFWPKLNASRQEFIDLGLERGVGGH HHHHHHHHCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC QQFSMTVLALRLSSLANGVSKLHGEVSRKLWSHVFPEYPAVEVPITHVTNGVHMWTWLNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEHHHHH DLKKLFDKYFPKGWEEKITDSEIWEYVDKVPDEELWEVHMKLKERMKVFLQGRIRRQRLR HHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGETIEELMEVDKLLPEKILTIGFARRFATYKRATLILKDIERLKMILTDNERPVQFVFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPADEPGKELIRQLYQLSRMPEFKNRIIILENYDMNIARHMISGVDVWMNNPRRPHE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCHHHCCCCCCCCCC ASGTSGQKAAMNGVINFSVMDGWWVEGYNGENGWTIGDNRDYDDNELQDRIDSVSIYSTL CCCCCCCHHHHCCEEEEEEECCEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH EKEIIPLYYKRDENGIPREWVKKMKNSIKSVALNFNSHRMLIDYIENLYLKGVEYYEFMN HHHHEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCC ADSFKKALEIARWHQRLLQNWGYIRIKPNLLRPSSGDSLRVGSEISLTANVYLGELKPEE HHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCEEECCEEEEEEEEEEECCCCCC VRVEIYVAMLNEDGEIVKFKTYPMKLEKEDVHGEYVYTGKFTVEEEGKMVYTIRVIPNPE EEEEEEEEEECCCCCEEEEEECCCEECCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCC NLPNGHFLPMAKWI CCCCCCCCCHHHCC >Mature Secondary Structure MYFLEKITVVPKLPEKLKRLEELAYNLWWTWNPKVEALFRSMDSELWYEVKRSPVKLIRR CCHHHHEEECCCCHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHH INQQKLNELAKNEKFLKEYAEVVAEFDAYMNNSNTWMDKNHPDRKNELVAYFCAEYGLHE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC SFPIYSGGLGILAGDHLKTASDLGLNIVGVGLLYRHGYFVQTIDKTGWQHSEFPSYDFSD CCCCCCCCEEEEECCCCCCHHHCCCHHEEHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC FPVVSATNEKGEEIYVNIEFPGRKVWAKVWKAMVGRSVLLLLDTDVPMNDPEDRKITAQL CCEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEEEE YGGNRETRIQQELVLGIGGVRALRMLGYNPKVWHMNEGHAAFLALERIREYVQGKKLDFR ECCCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCHH TAIELTRATNIFTTHTPVPAGNDVFDLSLIDKYFSEFWPKLNASRQEFIDLGLERGVGGH HHHHHHHHCCEEEECCCCCCCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC QQFSMTVLALRLSSLANGVSKLHGEVSRKLWSHVFPEYPAVEVPITHVTNGVHMWTWLNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHCCCEEEEHHHHH DLKKLFDKYFPKGWEEKITDSEIWEYVDKVPDEELWEVHMKLKERMKVFLQGRIRRQRLR HHHHHHHHHCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGETIEELMEVDKLLPEKILTIGFARRFATYKRATLILKDIERLKMILTDNERPVQFVFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE GKAHPADEPGKELIRQLYQLSRMPEFKNRIIILENYDMNIARHMISGVDVWMNNPRRPHE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHCCHHHCCCCCCCCCC ASGTSGQKAAMNGVINFSVMDGWWVEGYNGENGWTIGDNRDYDDNELQDRIDSVSIYSTL CCCCCCCHHHHCCEEEEEEECCEEEECCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH EKEIIPLYYKRDENGIPREWVKKMKNSIKSVALNFNSHRMLIDYIENLYLKGVEYYEFMN HHHHEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCHHHHHCC ADSFKKALEIARWHQRLLQNWGYIRIKPNLLRPSSGDSLRVGSEISLTANVYLGELKPEE HHHHHHHHHHHHHHHHHHHHCCEEEEECCEECCCCCCCEEECCEEEEEEEEEEECCCCCC VRVEIYVAMLNEDGEIVKFKTYPMKLEKEDVHGEYVYTGKFTVEEEGKMVYTIRVIPNPE EEEEEEEEEECCCCCEEEEEECCCEECCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCC NLPNGHFLPMAKWI CCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]