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The map label for this gene is yggW [C]

Identifier: 239616598

GI number: 239616598

Start: 214370

End: 215419

Strand: Reverse

Name: yggW [C]

Synonym: Kole_0190

Alternate gene names: 239616598

Gene position: 215419-214370 (Counterclockwise)

Preceding gene: 239616599

Following gene: 239616597

Centisome position: 9.36

GC content: 44.57

Gene sequence:

>1050_bases
ATGAACATCATACCGATTTTTCTTCCTCATGCCGGATGTAAACGGCGCTGTGTTTTCTGTAATGAATATTCAGCTACAGG
ACTCGGAAGGATTCCGACAAAGGATGAGATTTTTAACGAGGTTGATAGATATCTTGCGTTTTTCGCTGACAGGGAGAACG
TGGAGCTCGCTTTTTACGGTGGGACTTTCACAGGCTTGCCTGAATGGCTCATGCATGATTATCTGGATTTAGCGATGGAG
ATAATAAAATCCGGAAAGGCAAAAGCTATCCGTTTTTCCACCTCTCCAGAGGAGATAACCCAACGTAAGGTGGAGATTCT
ATCGGATTATCCGATCTCCCTTGTCGAAATTGGTGCGCAATCCTTCGATGAGGAGGTCCTGAGGCTTGCCAACCGGCCTC
ACGGGGTTAAGGAGATATATACTGCCTGTGAACTTCTGAAAGAGGCGAAAATTCCTTTCGGGATACATCTTATGACAGGT
TTGCCAGGGGATAGCGAGGAAAAGAATATCAGATCCGCGGTAGAGGTCGTAAAGTTGAAGGCTTCGACCTGTCGTATTCA
TCCCACCGTTGTCCTTAAGAACAGCACGTTAGAAAGCATGTATCACGAAGGGAAGTACAAGCCTCAGGATCTGGGAGAGG
CGTTAAATATACTGTGGAAAATGTACGTGATTATTAGCCTGGGTGGTGTGAAGATAAATAGGATAGGTATCTGTCTTTAC
GGTGATGAAGTGAACAATGTCGTAGCCGGCCCGTACCATCCTGCGATGGGGGAATTGGTTAAGAATTGGGTGGCGCTGGA
AATACTGAGGGTTTTAAAAAAAAGACGGGGTGATAAAATTATACTTAAGGTGGATGAAGGAACGAAGCAGTTTTTCACCG
GGCATAAAAAATGTGTTTTGAATAGAGCAAAAGAAGAAGGAATGGAAGTGATTTTCGAAAGGGCCAGTGCTCCGGAACTA
AATCTAAGAGAACTCATGAAAATTGTGTTGGTTGAGTCTTTAGATGAGCTCTTTCGCTCTGAAGTTTCCGGGATATTGCT
GGCGAATTAG

Upstream 100 bases:

>100_bases
ACAACCACGTAGTGGTTCGGGACAACTCCGAAGGAGTTCGCACCAATCCCAAAGGGATTCGCTCCCACTTCTCTATCCCC
TTTCATTGTATAATATCAAT

Downstream 100 bases:

>100_bases
GGGGTACAGTCATGAGACTCGTTTCTATATTCATAAAAGGTTTTAAGAGTTTCGCTTATCCGACAAAGATAGATATAAGT
AAAGGTATAACGGCCATAGT

Product: Radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MNIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTKDEIFNEVDRYLAFFADRENVELAFYGGTFTGLPEWLMHDYLDLAME
IIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIGAQSFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTG
LPGDSEEKNIRSAVEVVKLKASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALNILWKMYVIISLGGVKINRIGICLY
GDEVNNVVAGPYHPAMGELVKNWVALEILRVLKKRRGDKIILKVDEGTKQFFTGHKKCVLNRAKEEGMEVIFERASAPEL
NLRELMKIVLVESLDELFRSEVSGILLAN

Sequences:

>Translated_349_residues
MNIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTKDEIFNEVDRYLAFFADRENVELAFYGGTFTGLPEWLMHDYLDLAME
IIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIGAQSFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTG
LPGDSEEKNIRSAVEVVKLKASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALNILWKMYVIISLGGVKINRIGICLY
GDEVNNVVAGPYHPAMGELVKNWVALEILRVLKKRRGDKIILKVDEGTKQFFTGHKKCVLNRAKEEGMEVIFERASAPEL
NLRELMKIVLVESLDELFRSEVSGILLAN
>Mature_349_residues
MNIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTKDEIFNEVDRYLAFFADRENVELAFYGGTFTGLPEWLMHDYLDLAME
IIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIGAQSFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTG
LPGDSEEKNIRSAVEVVKLKASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALNILWKMYVIISLGGVKINRIGICLY
GDEVNNVVAGPYHPAMGELVKNWVALEILRVLKKRRGDKIILKVDEGTKQFFTGHKKCVLNRAKEEGMEVIFERASAPEL
NLRELMKIVLVESLDELFRSEVSGILLAN

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhcC [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=241, Percent_Identity=27.3858921161826, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6325171, Length=194, Percent_Identity=24.7422680412371, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI19920684, Length=251, Percent_Identity=25.8964143426295, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39403; Mature: 39403

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTKDEIFNEVDRYLAFFADRENVELAFYG
CCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
GTFTGLPEWLMHDYLDLAMEIIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIGAQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
SFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTGLPGDSEEKNIRSAVEVVKLK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
ASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALNILWKMYVIISLGGVKINRIGICLY
HHHEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
GDEVNNVVAGPYHPAMGELVKNWVALEILRVLKKRRGDKIILKVDEGTKQFFTGHKKCVL
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHHH
NRAKEEGMEVIFERASAPELNLRELMKIVLVESLDELFRSEVSGILLAN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MNIIPIFLPHAGCKRRCVFCNEYSATGLGRIPTKDEIFNEVDRYLAFFADRENVELAFYG
CCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEC
GTFTGLPEWLMHDYLDLAMEIIKSGKAKAIRFSTSPEEITQRKVEILSDYPISLVEIGAQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
SFDEEVLRLANRPHGVKEIYTACELLKEAKIPFGIHLMTGLPGDSEEKNIRSAVEVVKLK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHH
ASTCRIHPTVVLKNSTLESMYHEGKYKPQDLGEALNILWKMYVIISLGGVKINRIGICLY
HHHEEECCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEE
GDEVNNVVAGPYHPAMGELVKNWVALEILRVLKKRRGDKIILKVDEGTKQFFTGHKKCVL
CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCHHHHHH
NRAKEEGMEVIFERASAPELNLRELMKIVLVESLDELFRSEVSGILLAN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]