| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616559
Identifier: 239616559
GI number: 239616559
Start: 168141
End: 169817
Strand: Reverse
Name: 239616559
Synonym: Kole_0151
Alternate gene names: NA
Gene position: 169817-168141 (Counterclockwise)
Preceding gene: 239616560
Following gene: 239616558
Centisome position: 7.38
GC content: 43.89
Gene sequence:
>1677_bases GTGAAATGGAAGCGACTGATTTCTCTTATCTCGACGCTGATTAACTCGCATTACGGGATATCGTATAAAAAGTTTATTTA CTTCAAAAAGAAAGAAAGGCTCTGGGAACCAATACTCATAACCTTCGCAATTTTCTCCATGATCGTCGGTATGGTTCCGC TGTATTCGATCATTATGAAAACCTCATTTGAGCAGATGACAGCCATGGGGCTTCAAAATCTGTTTCTCATGCAGGCGTTC ACAGCAACGACCTTTATTGGTTTCTTTTTTGGTTTGTTTATCGTCGTGAATTACCTTTTCTTTTCCAGAGAGATGAAGGT GCTTTTGCCACTGCCTTTGAAGCCGTCAGAGGTTATGACGGCTAAATTCAGCGTGATAATACTCGACCAGATGCTTATCT CGCTGGTATTGCTGTTGCCGCCGCTTATATATTTTGGAGTAAAGACCTCTCAGGGATTACTTTACTGGTTTTTTGCCGCT GTGATCTTTTTGTTATCGCAGATACTTCCCGTAATGCTGGCGACGGTTATAATCCTGCCGCTGTACAGGGTGATAAAATT CGACAGATACAGGGATTTCTTCATTTTTATCCTGGCGAGCCTTCTTCTCGTAGCTTCTCTATTCTTCGTTGCGATTACCA ACAGAATGAGTTTCTCAGGAGGCTTCTCCCCGGAAGCCCTTGCCAGGATTCTCAGCGATCCGGAAAGTTTGATAAACAAA GTTGGAAGAATCTATCCGCCGGCAATCCTTGTTGTGAAGAGCCTGACAGCTGGTGGTTTTGAAGGATTGATTGCGTTTCT GGGATTTGTGGTGTTACATGTGTTTGTGTTCCTCCTGCTTTTGTACATGGGCAAGAAATTCTACTACAGCACTTATATAG AACTCCAGGAAGCTCACGCTAAAAGGACTAAAGTTGGAAAAGATGAACTTGAACGTCTTTTTGGAAAATCCAGGAGCCGA TTCGCGGCATTGATGGCGAGGGAATGGAAATATTTCCTCAGGGTACCGTCCTTTTCTTTCAACGGGTTCATAAATGTGGT GATCTTTCCGATACTGCTTTTAATCTTTGCATCTGTCAACGGTGAACAGATGGAAGAGATAAAGAGGTTTATCCCACTGA TAAAACCCTATGCAGTGCCTCTCGGCGTTTTAGTTGCCGTACTTGCTGGTGGTATAAACTCGCTTTCTCCTACCCTTCTC AGCCGGGAAGGAAGATTGTTCATCGAACTCAAAGCGCTGCCGGTGAGCCCAACGACCATCTTCGTTGTTAAATTTACCCA CATCATGACGATTACAATTATTGCTCCGATCTTTGTGTCAATAGCGCTGCATATGTTTTTAGAGCTCAGCTTGATACAGA GTCTGTCGATTTTCTTCATTTCCACAGTGAATCTTTTATTTTTGAACCTTCTCCAGACGATGATAGATTCGAAGAAACCG GTATTAGACTGGGACAACCCGAGCAAAGCCATGAAGCAGAACATCAATGTTGCGCTGACCATTCCCATAATCTTTGGTTT CGTGGGTGGATTTGGTTATCTTGGTTTTGTGCTGAAAGGCACATTATCTCCGGTGGTGATGTCTTCAATCCTTCTCCTTG TCGGAGTGGCTGGTTCAGCACTATGTGCCCCTATCGCAACGAGGATGTTCGGAAGTGCATTAAGCAGGGACGTTTGA
Upstream 100 bases:
>100_bases ATCGGAAAGGGAAAACTTTTGTTCGTAGGAACGGTTGAAGAACTGAAAAAAGCCAGGGGTGAAGAAAGCCTCGAAAAACT TTTCTTAGAGGTGACCGAGA
Downstream 100 bases:
>100_bases TCTCCTGAACATCAATTACAATATTCGAAAGATAAGAAGTGCCGATAACCGGCACTTCTTTTTTTGATGCTTGACAGCTG GAAGAGAATGTTGTATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MKWKRLISLISTLINSHYGISYKKFIYFKKKERLWEPILITFAIFSMIVGMVPLYSIIMKTSFEQMTAMGLQNLFLMQAF TATTFIGFFFGLFIVVNYLFFSREMKVLLPLPLKPSEVMTAKFSVIILDQMLISLVLLLPPLIYFGVKTSQGLLYWFFAA VIFLLSQILPVMLATVIILPLYRVIKFDRYRDFFIFILASLLLVASLFFVAITNRMSFSGGFSPEALARILSDPESLINK VGRIYPPAILVVKSLTAGGFEGLIAFLGFVVLHVFVFLLLLYMGKKFYYSTYIELQEAHAKRTKVGKDELERLFGKSRSR FAALMAREWKYFLRVPSFSFNGFINVVIFPILLLIFASVNGEQMEEIKRFIPLIKPYAVPLGVLVAVLAGGINSLSPTLL SREGRLFIELKALPVSPTTIFVVKFTHIMTITIIAPIFVSIALHMFLELSLIQSLSIFFISTVNLLFLNLLQTMIDSKKP VLDWDNPSKAMKQNINVALTIPIIFGFVGGFGYLGFVLKGTLSPVVMSSILLLVGVAGSALCAPIATRMFGSALSRDV
Sequences:
>Translated_558_residues MKWKRLISLISTLINSHYGISYKKFIYFKKKERLWEPILITFAIFSMIVGMVPLYSIIMKTSFEQMTAMGLQNLFLMQAF TATTFIGFFFGLFIVVNYLFFSREMKVLLPLPLKPSEVMTAKFSVIILDQMLISLVLLLPPLIYFGVKTSQGLLYWFFAA VIFLLSQILPVMLATVIILPLYRVIKFDRYRDFFIFILASLLLVASLFFVAITNRMSFSGGFSPEALARILSDPESLINK VGRIYPPAILVVKSLTAGGFEGLIAFLGFVVLHVFVFLLLLYMGKKFYYSTYIELQEAHAKRTKVGKDELERLFGKSRSR FAALMAREWKYFLRVPSFSFNGFINVVIFPILLLIFASVNGEQMEEIKRFIPLIKPYAVPLGVLVAVLAGGINSLSPTLL SREGRLFIELKALPVSPTTIFVVKFTHIMTITIIAPIFVSIALHMFLELSLIQSLSIFFISTVNLLFLNLLQTMIDSKKP VLDWDNPSKAMKQNINVALTIPIIFGFVGGFGYLGFVLKGTLSPVVMSSILLLVGVAGSALCAPIATRMFGSALSRDV >Mature_558_residues MKWKRLISLISTLINSHYGISYKKFIYFKKKERLWEPILITFAIFSMIVGMVPLYSIIMKTSFEQMTAMGLQNLFLMQAF TATTFIGFFFGLFIVVNYLFFSREMKVLLPLPLKPSEVMTAKFSVIILDQMLISLVLLLPPLIYFGVKTSQGLLYWFFAA VIFLLSQILPVMLATVIILPLYRVIKFDRYRDFFIFILASLLLVASLFFVAITNRMSFSGGFSPEALARILSDPESLINK VGRIYPPAILVVKSLTAGGFEGLIAFLGFVVLHVFVFLLLLYMGKKFYYSTYIELQEAHAKRTKVGKDELERLFGKSRSR FAALMAREWKYFLRVPSFSFNGFINVVIFPILLLIFASVNGEQMEEIKRFIPLIKPYAVPLGVLVAVLAGGINSLSPTLL SREGRLFIELKALPVSPTTIFVVKFTHIMTITIIAPIFVSIALHMFLELSLIQSLSIFFISTVNLLFLNLLQTMIDSKKP VLDWDNPSKAMKQNINVALTIPIIFGFVGGFGYLGFVLKGTLSPVVMSSILLLVGVAGSALCAPIATRMFGSALSRDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62780; Mature: 62780
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWKRLISLISTLINSHYGISYKKFIYFKKKERLWEPILITFAIFSMIVGMVPLYSIIMK CCHHHHHHHHHHHHHCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFEQMTAMGLQNLFLMQAFTATTFIGFFFGLFIVVNYLFFSREMKVLLPLPLKPSEVMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH AKFSVIILDQMLISLVLLLPPLIYFGVKTSQGLLYWFFAAVIFLLSQILPVMLATVIILP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRVIKFDRYRDFFIFILASLLLVASLFFVAITNRMSFSGGFSPEALARILSDPESLINK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH VGRIYPPAILVVKSLTAGGFEGLIAFLGFVVLHVFVFLLLLYMGKKFYYSTYIELQEAHA HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KRTKVGKDELERLFGKSRSRFAALMAREWKYFLRVPSFSFNGFINVVIFPILLLIFASVN HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC GEQMEEIKRFIPLIKPYAVPLGVLVAVLAGGINSLSPTLLSREGRLFIELKALPVSPTTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEECCCCCEE FVVKFTHIMTITIIAPIFVSIALHMFLELSLIQSLSIFFISTVNLLFLNLLQTMIDSKKP EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLDWDNPSKAMKQNINVALTIPIIFGFVGGFGYLGFVLKGTLSPVVMSSILLLVGVAGSA CCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH LCAPIATRMFGSALSRDV HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKWKRLISLISTLINSHYGISYKKFIYFKKKERLWEPILITFAIFSMIVGMVPLYSIIMK CCHHHHHHHHHHHHHCCCCCCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSFEQMTAMGLQNLFLMQAFTATTFIGFFFGLFIVVNYLFFSREMKVLLPLPLKPSEVMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHH AKFSVIILDQMLISLVLLLPPLIYFGVKTSQGLLYWFFAAVIFLLSQILPVMLATVIILP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYRVIKFDRYRDFFIFILASLLLVASLFFVAITNRMSFSGGFSPEALARILSDPESLINK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHH VGRIYPPAILVVKSLTAGGFEGLIAFLGFVVLHVFVFLLLLYMGKKFYYSTYIELQEAHA HHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH KRTKVGKDELERLFGKSRSRFAALMAREWKYFLRVPSFSFNGFINVVIFPILLLIFASVN HHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC GEQMEEIKRFIPLIKPYAVPLGVLVAVLAGGINSLSPTLLSREGRLFIELKALPVSPTTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCEEEEEEEECCCCCEE FVVKFTHIMTITIIAPIFVSIALHMFLELSLIQSLSIFFISTVNLLFLNLLQTMIDSKKP EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VLDWDNPSKAMKQNINVALTIPIIFGFVGGFGYLGFVLKGTLSPVVMSSILLLVGVAGSA CCCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH LCAPIATRMFGSALSRDV HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA