| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is fur [H]
Identifier: 239616558
GI number: 239616558
Start: 167595
End: 168053
Strand: Reverse
Name: fur [H]
Synonym: Kole_0150
Alternate gene names: 239616558
Gene position: 168053-167595 (Counterclockwise)
Preceding gene: 239616559
Following gene: 239616557
Centisome position: 7.3
GC content: 41.18
Gene sequence:
>459_bases ATGTTGTATAAATATATGTGCAAATCATTTGCGCAAATCATTTGCGAGGTGATTGTTTTGAAACGCTTAACCGAGCTGAG AAAAGAGATCTTAAGGATCATCGAAACCTCTGAAGTGCCACTGAACGCCGAAGAAATCTATCAGAAACTTGAAACAAAGC CGAATCTATCGTCAGTTTACCGCGGGCTTTCCTTTCTTGAAGACAACGGGATGATAAAATCGATAAGTTTCGACTCCCAT GTCCGCTTTTTCTATCCTGTGGAAAAAAATCATCCATTGCATTTTATATACTGTAAAAACTGCAGAAAAATAGAGGTCTT CAACGAATGCTTTGCGGACAGGATTCAGGCACAGATTGAGAAAAAGCACGATTGCACGATAACAGACCATGTGTTTTATT TCATAGGGCTGTGCAGCGAATGCAGGCACAACTATCCCGGAAGGGGGAGAGAGACATGA
Upstream 100 bases:
>100_bases CAGGGACGTTTGATCTCCTGAACATCAATTACAATATTCGAAAGATAAGAAGTGCCGATAACCGGCACTTCTTTTTTTGA TGCTTGACAGCTGGAAGAGA
Downstream 100 bases:
>100_bases AGAAGCTATCTGTCTTTATAGCGTGGATTATAATAATGGCGAGTCTTGGCTTTTCACTGAACGTTGTAACAACGATAAAT CCGTATTATCTGATCGTCAA
Product: ferric uptake regulator, Fur family
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MLYKYMCKSFAQIICEVIVLKRLTELRKEILRIIETSEVPLNAEEIYQKLETKPNLSSVYRGLSFLEDNGMIKSISFDSH VRFFYPVEKNHPLHFIYCKNCRKIEVFNECFADRIQAQIEKKHDCTITDHVFYFIGLCSECRHNYPGRGRET
Sequences:
>Translated_152_residues MLYKYMCKSFAQIICEVIVLKRLTELRKEILRIIETSEVPLNAEEIYQKLETKPNLSSVYRGLSFLEDNGMIKSISFDSH VRFFYPVEKNHPLHFIYCKNCRKIEVFNECFADRIQAQIEKKHDCTITDHVFYFIGLCSECRHNYPGRGRET >Mature_152_residues MLYKYMCKSFAQIICEVIVLKRLTELRKEILRIIETSEVPLNAEEIYQKLETKPNLSSVYRGLSFLEDNGMIKSISFDSH VRFFYPVEKNHPLHFIYCKNCRKIEVFNECFADRIQAQIEKKHDCTITDHVFYFIGLCSECRHNYPGRGRET
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
None
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 18054; Mature: 18054
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKYMCKSFAQIICEVIVLKRLTELRKEILRIIETSEVPLNAEEIYQKLETKPNLSSVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH RGLSFLEDNGMIKSISFDSHVRFFYPVEKNHPLHFIYCKNCRKIEVFNECFADRIQAQIE HHHHHHHCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH KKHDCTITDHVFYFIGLCSECRHNYPGRGRET HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLYKYMCKSFAQIICEVIVLKRLTELRKEILRIIETSEVPLNAEEIYQKLETKPNLSSVY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH RGLSFLEDNGMIKSISFDSHVRFFYPVEKNHPLHFIYCKNCRKIEVFNECFADRIQAQIE HHHHHHHCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH KKHDCTITDHVFYFIGLCSECRHNYPGRGRET HCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8083178 [H]