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The map label for this gene is ybaT [C]

Identifier: 239616528

GI number: 239616528

Start: 135387

End: 136679

Strand: Reverse

Name: ybaT [C]

Synonym: Kole_0120

Alternate gene names: 239616528

Gene position: 136679-135387 (Counterclockwise)

Preceding gene: 239616529

Following gene: 239616527

Centisome position: 5.94

GC content: 39.37

Gene sequence:

>1293_bases
GTGGGTGAAAAGAAATCGATAGGACTTTGGTCTGCTGTGTCAATAGGTGTTGGTGGTATGGTGGGGGCAGGAATATTTTC
GATATTGGGTACTGCTTGCCAGATAGGAGGCAATGCTGTATATCTTTCTTTTGTTATCGCGGGGATCGTAGCACTTTTTA
GTACGTATTCTTATGCCAAATTGGGAGCAAAATATCCATCTGCTGGTGGACCTGTTGAGTTTCTGGTCAGGAGTTTTGGT
AGTGGGATTTTAAGCGGAGGGTTCAACATTCTGCTGTGGATTGGCTATATTCTGGCACTCTCCCTTTATGCACGAGCGTT
TGCAGCATATGCGTTGACTTTTTTTCCAGATGCTCCCTCAATGCTACTGAATATATTTGCGACAGGTATTATTCTTTTAT
TCGTCTTTGTTAATTTTATTGGGTCGAAGGCTGTGGGTAGATCGGAATTATTTATTGTTACAATAAAGGTGGGAATACTC
GTATTATTTGCCATTGCTGGGTTTTTCTTTATAAAACCAGAACTATTATCTCCCTCTAGATTTCCACCAGTTAATAATAT
ACTTTTTGCAGCAGCGATTGTTTTCCTTGCGTATGAAGGGTTCGGTTTGATTACAAATGCTGCAGAAGACATGAAAGACC
CTGCTAAAACTCTTCCTCGAGCTCTCTACTTGAGTGTTTTTATTGTTATTATGATCTATGTTGGTGTGTCATTGGCAGTG
ATAGGAAATTTGCCATTGCCTGAGATTGTGAGAGCAAAGGATTATGCCCTGGCCGAAGCGGCTAAACCTTTTCTTGGCTC
AATAGGGTTCACGATAATTGCTATTGCTGCTTTATTTTCAACTGCGTCAGCTATCAATGCGACCCTTTATGGCGGAGCAA
ACGTTAGTTACATAATTGCTAAAGAAGGCGAATTACCTAAGTATTTCGAAAAAAAAGTTTGGGGAAGAGGAATAGAGGGC
TTGTTTATAACAGCCGGACTTGTTATACTATTTGCTAATTTGTTTGACCTCAGCAAAATTGCTATGGTAGGCAGCGCATC
ATTCCTTTTAGTTTATGCAGCCGTTAATATCGGACACTTGAGATTACGAAAGGAAACTCATGGCAATCTAATCCTGATAT
GGCTCGCTATCATAGGAAATCTTGTTTCATTCTCGATATTAGTTCGTTATTTACTGAGTCATTCTCTGTTGACATTGGTA
TTTTTGATGATTATCCTGTTTTTTAGTTTTACTGGTGAGTGGTTATACAGAAAGTGTACTAAAAGAGAGATTAAGGTTAG
GAAAAATGTATGA

Upstream 100 bases:

>100_bases
TTTTTTGAGGGTAAAATGAGAGTTGATAGAGAGGTTTGAAAGAAGAGAACCAAAATATTAAAATTTGTACTACCATAGCA
TTACTTAGGGGGAAATAACT

Downstream 100 bases:

>100_bases
TATAGTTTCTTTGGAGAATGCTTCATGTCATTTGCAAATATAAAAATAGGACGGGAATTGGAATGAAAATTAGCAAAAAA
GAAATTGAAAAATGCAAAGA

Product: amino acid permease-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MGEKKSIGLWSAVSIGVGGMVGAGIFSILGTACQIGGNAVYLSFVIAGIVALFSTYSYAKLGAKYPSAGGPVEFLVRSFG
SGILSGGFNILLWIGYILALSLYARAFAAYALTFFPDAPSMLLNIFATGIILLFVFVNFIGSKAVGRSELFIVTIKVGIL
VLFAIAGFFFIKPELLSPSRFPPVNNILFAAAIVFLAYEGFGLITNAAEDMKDPAKTLPRALYLSVFIVIMIYVGVSLAV
IGNLPLPEIVRAKDYALAEAAKPFLGSIGFTIIAIAALFSTASAINATLYGGANVSYIIAKEGELPKYFEKKVWGRGIEG
LFITAGLVILFANLFDLSKIAMVGSASFLLVYAAVNIGHLRLRKETHGNLILIWLAIIGNLVSFSILVRYLLSHSLLTLV
FLMIILFFSFTGEWLYRKCTKREIKVRKNV

Sequences:

>Translated_430_residues
MGEKKSIGLWSAVSIGVGGMVGAGIFSILGTACQIGGNAVYLSFVIAGIVALFSTYSYAKLGAKYPSAGGPVEFLVRSFG
SGILSGGFNILLWIGYILALSLYARAFAAYALTFFPDAPSMLLNIFATGIILLFVFVNFIGSKAVGRSELFIVTIKVGIL
VLFAIAGFFFIKPELLSPSRFPPVNNILFAAAIVFLAYEGFGLITNAAEDMKDPAKTLPRALYLSVFIVIMIYVGVSLAV
IGNLPLPEIVRAKDYALAEAAKPFLGSIGFTIIAIAALFSTASAINATLYGGANVSYIIAKEGELPKYFEKKVWGRGIEG
LFITAGLVILFANLFDLSKIAMVGSASFLLVYAAVNIGHLRLRKETHGNLILIWLAIIGNLVSFSILVRYLLSHSLLTLV
FLMIILFFSFTGEWLYRKCTKREIKVRKNV
>Mature_429_residues
GEKKSIGLWSAVSIGVGGMVGAGIFSILGTACQIGGNAVYLSFVIAGIVALFSTYSYAKLGAKYPSAGGPVEFLVRSFGS
GILSGGFNILLWIGYILALSLYARAFAAYALTFFPDAPSMLLNIFATGIILLFVFVNFIGSKAVGRSELFIVTIKVGILV
LFAIAGFFFIKPELLSPSRFPPVNNILFAAAIVFLAYEGFGLITNAAEDMKDPAKTLPRALYLSVFIVIMIYVGVSLAVI
GNLPLPEIVRAKDYALAEAAKPFLGSIGFTIIAIAALFSTASAINATLYGGANVSYIIAKEGELPKYFEKKVWGRGIEGL
FITAGLVILFANLFDLSKIAMVGSASFLLVYAAVNIGHLRLRKETHGNLILIWLAIIGNLVSFSILVRYLLSHSLLTLVF
LMIILFFSFTGEWLYRKCTKREIKVRKNV

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33286428, Length=327, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI115648063, Length=324, Percent_Identity=26.2345679012346, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI115648022, Length=324, Percent_Identity=26.2345679012346, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI181337167, Length=395, Percent_Identity=25.3164556962025, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI9790235, Length=284, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI71999149, Length=326, Percent_Identity=24.5398773006135, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI258645169, Length=406, Percent_Identity=22.6600985221675, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1786694, Length=393, Percent_Identity=38.4223918575064, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1786789, Length=373, Percent_Identity=24.1286863270777, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1788480, Length=394, Percent_Identity=24.3654822335025, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790653, Length=424, Percent_Identity=23.1132075471698, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87081869, Length=389, Percent_Identity=23.3933161953728, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI87082250, Length=327, Percent_Identity=25.6880733944954, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786302, Length=451, Percent_Identity=21.9512195121951, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87081915, Length=334, Percent_Identity=23.9520958083832, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17532491, Length=407, Percent_Identity=27.7641277641278, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI32566699, Length=350, Percent_Identity=26.8571428571429, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17568033, Length=325, Percent_Identity=27.0769230769231, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17540018, Length=324, Percent_Identity=27.1604938271605, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI193208714, Length=325, Percent_Identity=24.3076923076923, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32566695, Length=325, Percent_Identity=24.3076923076923, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17533459, Length=399, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI221512776, Length=403, Percent_Identity=26.0545905707196, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24666159, Length=403, Percent_Identity=26.0545905707196, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI45550968, Length=322, Percent_Identity=28.8819875776398, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI19921172, Length=322, Percent_Identity=28.8819875776398, Blast_Score=95, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24667468, Length=380, Percent_Identity=27.8947368421053, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI221331183, Length=322, Percent_Identity=26.7080745341615, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17647653, Length=322, Percent_Identity=26.7080745341615, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24664379, Length=322, Percent_Identity=26.7080745341615, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24651635, Length=318, Percent_Identity=26.1006289308176, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24651633, Length=318, Percent_Identity=26.1006289308176, Blast_Score=78, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24668806, Length=404, Percent_Identity=23.019801980198, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356285, Length=404, Percent_Identity=23.019801980198, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24668802, Length=404, Percent_Identity=23.019801980198, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641995, Length=320, Percent_Identity=23.75, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24641993, Length=320, Percent_Identity=23.75, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281366235, Length=401, Percent_Identity=25.1870324189526, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI116007820, Length=401, Percent_Identity=25.1870324189526, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357367, Length=324, Percent_Identity=23.7654320987654, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46353; Mature: 46222

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKKSIGLWSAVSIGVGGMVGAGIFSILGTACQIGGNAVYLSFVIAGIVALFSTYSYAK
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGAKYPSAGGPVEFLVRSFGSGILSGGFNILLWIGYILALSLYARAFAAYALTFFPDAPS
HCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MLLNIFATGIILLFVFVNFIGSKAVGRSELFIVTIKVGILVLFAIAGFFFIKPELLSPSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHCCCCC
FPPVNNILFAAAIVFLAYEGFGLITNAAEDMKDPAKTLPRALYLSVFIVIMIYVGVSLAV
CCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGNLPLPEIVRAKDYALAEAAKPFLGSIGFTIIAIAALFSTASAINATLYGGANVSYIIA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE
KEGELPKYFEKKVWGRGIEGLFITAGLVILFANLFDLSKIAMVGSASFLLVYAAVNIGHL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHE
RLRKETHGNLILIWLAIIGNLVSFSILVRYLLSHSLLTLVFLMIILFFSFTGEWLYRKCT
EEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KREIKVRKNV
HHHHHHCCCC
>Mature Secondary Structure 
GEKKSIGLWSAVSIGVGGMVGAGIFSILGTACQIGGNAVYLSFVIAGIVALFSTYSYAK
CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LGAKYPSAGGPVEFLVRSFGSGILSGGFNILLWIGYILALSLYARAFAAYALTFFPDAPS
HCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
MLLNIFATGIILLFVFVNFIGSKAVGRSELFIVTIKVGILVLFAIAGFFFIKPELLSPSR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHCCCCC
FPPVNNILFAAAIVFLAYEGFGLITNAAEDMKDPAKTLPRALYLSVFIVIMIYVGVSLAV
CCCHHHHHHHHHHHHHHHCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGNLPLPEIVRAKDYALAEAAKPFLGSIGFTIIAIAALFSTASAINATLYGGANVSYIIA
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEEE
KEGELPKYFEKKVWGRGIEGLFITAGLVILFANLFDLSKIAMVGSASFLLVYAAVNIGHL
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHE
RLRKETHGNLILIWLAIIGNLVSFSILVRYLLSHSLLTLVFLMIILFFSFTGEWLYRKCT
EEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
KREIKVRKNV
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]