| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239616497
Identifier: 239616497
GI number: 239616497
Start: 101153
End: 101956
Strand: Reverse
Name: 239616497
Synonym: Kole_0087
Alternate gene names: NA
Gene position: 101956-101153 (Counterclockwise)
Preceding gene: 239616510
Following gene: 239616496
Centisome position: 4.43
GC content: 45.77
Gene sequence:
>804_bases ATGAAGCTTGCATTCATTTCTGATATACACGGAAATCTTGAAGCACTGGAAGCGGTGCTCGAAGACATCAAAAGGCGGGA AGTAGATCGGATATATTGCCTGGGAGACCTTGTGGGATATGGACCTGATCCGGAGAAGGTTGTTCAAAAGATCAAGGTTC TGGGTATCTCCACAGTGATGGGGAACTATGATGACGCTATTGCACACGAAAAGAAAAGCTGCGGTTGTGCCTACAACCCT GGTCGCGAAACGGAAGTAGGCAACATCACCTTAAACTGGTCCATCGCCAACACTTCCCAGGAATCGAAGGAGTTTCTTAA ATCGTTACCGCATAAGCTGAATTTTGAGGCTGAAGAGGTCCGATTCCTCCTGGTGCACGGAAGTCCTCTGGATAATCTAT TGGAGTACATAAAACCAGATACTCCTGTGGAACGACTCAAGGAGATAACGGAGGGAATATCAGCCGATGTAATAGTCAAC GGACATACCCACTTGCCCATGGTACGCTGGATAAACGGCAAGCTTATTTTCAACGCTGGCAGTGTCGGTCGCCCGAAAGA TGGAGACCCCAGGGCCTGCTATTTGATTGTTAATGTGAACAAGGGTTCTTTGAAACACGAATTTGTAAGGATCAGCTATC CGGTAAAAATAACGGTAGAAAAACTGGCGAAGTATAAACTTCCTATGGAACTTGCCACAGTCCTAGCCCTGGGAACAACC TTCAATATGGGGAAAAGCGACAAGACAGAAAAACGATCAAAAATAGACACAGACATTACCTTAGACCCAGGGATAAGAGA ATAA
Upstream 100 bases:
>100_bases TATACTTATAGTGGTTTACTGGCGGTAGAATCAGATAATTTCTTAGTTATAATGAAAACATTGAAATAATCGAAGGGCAC TGATACTGAAGGAGGTCAAC
Downstream 100 bases:
>100_bases AAAGTTGAAAGTTGAATTCCTGGCGGCCATAGGTATAAACTATATAGCGTATCACCGAAGGAGGAATTTTTATGCCTTTT AAAAGCCTGTTTCTTTCAGG
Product: phosphodiesterase, MJ0936 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKLAFISDIHGNLEALEAVLEDIKRREVDRIYCLGDLVGYGPDPEKVVQKIKVLGISTVMGNYDDAIAHEKKSCGCAYNP GRETEVGNITLNWSIANTSQESKEFLKSLPHKLNFEAEEVRFLLVHGSPLDNLLEYIKPDTPVERLKEITEGISADVIVN GHTHLPMVRWINGKLIFNAGSVGRPKDGDPRACYLIVNVNKGSLKHEFVRISYPVKITVEKLAKYKLPMELATVLALGTT FNMGKSDKTEKRSKIDTDITLDPGIRE
Sequences:
>Translated_267_residues MKLAFISDIHGNLEALEAVLEDIKRREVDRIYCLGDLVGYGPDPEKVVQKIKVLGISTVMGNYDDAIAHEKKSCGCAYNP GRETEVGNITLNWSIANTSQESKEFLKSLPHKLNFEAEEVRFLLVHGSPLDNLLEYIKPDTPVERLKEITEGISADVIVN GHTHLPMVRWINGKLIFNAGSVGRPKDGDPRACYLIVNVNKGSLKHEFVRISYPVKITVEKLAKYKLPMELATVLALGTT FNMGKSDKTEKRSKIDTDITLDPGIRE >Mature_267_residues MKLAFISDIHGNLEALEAVLEDIKRREVDRIYCLGDLVGYGPDPEKVVQKIKVLGISTVMGNYDDAIAHEKKSCGCAYNP GRETEVGNITLNWSIANTSQESKEFLKSLPHKLNFEAEEVRFLLVHGSPLDNLLEYIKPDTPVERLKEITEGISADVIVN GHTHLPMVRWINGKLIFNAGSVGRPKDGDPRACYLIVNVNKGSLKHEFVRISYPVKITVEKLAKYKLPMELATVLALGTT FNMGKSDKTEKRSKIDTDITLDPGIRE
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 29788; Mature: 29788
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAFISDIHGNLEALEAVLEDIKRREVDRIYCLGDLVGYGPDPEKVVQKIKVLGISTVM CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHHHHHHHHHHHHHHH GNYDDAIAHEKKSCGCAYNPGRETEVGNITLNWSIANTSQESKEFLKSLPHKLNFEAEEV CCCHHHHHHCHHCCCCCCCCCCCCEECEEEEEEEECCCCHHHHHHHHHCCHHCCCCHHHE RFLLVHGSPLDNLLEYIKPDTPVERLKEITEGISADVIVNGHTHLPMVRWINGKLIFNAG EEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEECC SVGRPKDGDPRACYLIVNVNKGSLKHEFVRISYPVKITVEKLAKYKLPMELATVLALGTT CCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEHHHHHHHCCCHHHHHHHHHCCC FNMGKSDKTEKRSKIDTDITLDPGIRE CCCCCCCCHHHHHHCCCCEEECCCCCC >Mature Secondary Structure MKLAFISDIHGNLEALEAVLEDIKRREVDRIYCLGDLVGYGPDPEKVVQKIKVLGISTVM CCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCHHHHHHHHHHHHHHHHH GNYDDAIAHEKKSCGCAYNPGRETEVGNITLNWSIANTSQESKEFLKSLPHKLNFEAEEV CCCHHHHHHCHHCCCCCCCCCCCCEECEEEEEEEECCCCHHHHHHHHHCCHHCCCCHHHE RFLLVHGSPLDNLLEYIKPDTPVERLKEITEGISADVIVNGHTHLPMVRWINGKLIFNAG EEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCEEEEECC SVGRPKDGDPRACYLIVNVNKGSLKHEFVRISYPVKITVEKLAKYKLPMELATVLALGTT CCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEHHHHHHHCCCHHHHHHHHHCCC FNMGKSDKTEKRSKIDTDITLDPGIRE CCCCCCCCHHHHHHCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]