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The map label for this gene is 239616433

Identifier: 239616433

GI number: 239616433

Start: 30600

End: 33110

Strand: Reverse

Name: 239616433

Synonym: Kole_0022

Alternate gene names: NA

Gene position: 33110-30600 (Counterclockwise)

Preceding gene: 239616434

Following gene: 239616414

Centisome position: 1.44

GC content: 43.49

Gene sequence:

>2511_bases
ATGAGGAAAGTTTCGGTTCTTTTATTGAGTTTTTTGATCTTTTCAGTCATTGTGATGTCTGGAATTGTGGTCAAGAAAAT
CGAGATTACAGGGAACACCATTCTCAAGGATTCCGAGATAAGAGAACTGTTGGGAATAAAACTGAGAACGGAGATTGACC
GCGAAACGCTCGAAGCTTCCCTGGGGTCTCTTACCGATTCCGGTTATTTCAAAAACGTGGATTTTTCTTTTGATGAGGCC
TCTGGCCTTCTTAGCATAACCGTCGAGGAATTTCCCGGTGCTGATGTTGAGATAACCTTCGTTGGTCCAAAAATCGCAGA
CAAAGACACGTTGCTGGCTTCAGGAGTGACGATAGAAGATGGAAAACCTTTAAATCCAACACGTATTATTTACGAGATTC
CGAGATCCGTTGAGGGCCTAACCGAAACTCTGAAATCTCTTGGATACCCTGAAGCGTTTTTTGATATCGAATGGGATACG
GAACCGGATAAGAAAGATATTATGCGCGGGAATGTTGAAGACCATATAAAGATTATTTTCAAGATCAAGCCTTATTATCT
CTGGGATGTAGAAATCGAAGCACCTTTATCTGAAAGGGCACTGGAAGAACTCAAGAACACCGCGAAGCTTAAAACTTTCA
AGAGTTATTACGAAGCTCCCGGGATAATCAGACTGTTTATGAAGGAGAGTTCTTATGTTCCTAAAGCAAGCGATATAGCT
TCCGCTGTGCGTTCGATTTTCAGTACTTACTATGTTAATCCCGAAGGGTCCTGGGGATTAGAAAAGGTCTATCGGGCGCT
GGCTTTCGCATACAGCAATGCCTTAAAAACCGCAAGAGAGGTGGAGCTACCTGAAGGCGTAGAAGGCCAGGCAAAAATCA
TCACTCTTTCATTCAAGCCCGCTTCGTACATTGCCAGACCGATGGAAGTCAAAACGATCTTTTTCACCGGAAATGAGCAC
GTTTCAAGCCTCACACTTTTAAATGCTGTGGGCATCAGGGAAGGAGAGGTAATAGATTCTGAGAAAATAGCAAAGGCGCT
TCAGGCAATCCAGGAAGTTTATTCAAAAGAGGGCTATCCCTTTACAAAACAACAGGTGAGAATTGATGAGAATCTTGGAT
CCCTGACTTTTGAGATAACAGAGTTGAAGGTAGGAAATATAAATGTCGAATACGTGGGTGAGCACAAGACCAGAGATTAC
CTGATCCAGGACAAGATCGTGCTCAAAAAAGGTGAGGTACTAAGCTTAAAAGATTACCAGAACACATATGCATTTCTCAA
TTCCACGGGATATTTCGACTCTGTTGTTATAAATCCAATTCCTTCAGATGGTGAGACGCTCGACGTCAAAATTGTTCTTG
ATGAAAAGGATAAAAACGGAAAGATAATGGGTGGCGGAGGTTGGCAGGATGGCCTCATGCTTAACCTGGACGTCGGGTTC
CTGAACCCCTTTGGGTACGGTCAGGATATTTCTCTAAAGGCGAACGTGAACTTTCCCGTTGGTGGAAGCAAAACAACGAT
AAGCACAGATGAAACCACCGGGGCGACTATTACTGAAACCAGTTCACCAACGTACGACCTATCATTTTCATATATCGTTC
CAAAAATTTTCGCCTCGAATTGGGATGTTGGTTTGAGCATGAAGCTTCGTTCCACAGGAAAGAGCACTGAAGAAGCCACC
GAAACGGCACCAGATACAATTGAAGCAACCATTACGGAAGAAAGAGAATATCGTATTGATTTAGCATTGGCTCCAACTTA
CAACCTGTCCGCAGCTGAAAAAATCAGAACAAGTGCGGGATTTGAGTATATAAATATTTATACAGAAACCGCTACGGAAT
TGAGAACCGCTACTTCAACTGAAGTTGCAACCAGTCAGACGGCAAACACATTCTACGGTCTTTATACCTCTCTTTCCTAC
AGTTACAGTACCCGGGATGATCTTCTGAGACCGAAAAACGGAACAGAATTCTCTGCAAGGCTGTACGCCCGGGGAATCTT
TGGCAATGAACCTTTTGCAGGAGTAATGTTTGAATTCAAAAAGTTCATCGATCTGGGACCTTTACCGATAGCCAAAGGAT
TGGGGAATCCGGTCCTTGGTTTTAGAGCGCGAACAGATCAATTGTTCCCCTTTAATGAATATAACAAGGTCTTTGAAACT
TATCTGCTTTCACCCGGTACCTATCTTAGAGTGAAAAACGGTGGTTTGGTGGTGGGAAATGATGTTTATGGTGTGACAGC
AGCTTCTCTGCAGTTGAGAGTTCCCCTCGTTGAAATCCGTGGAAGCATGCCTCTCGATTTTGTTCTTTTTGGAGATCTTG
TTTACTATCGTGAAGGTGCCAACATTGCTGATCTGATTGGAAATAAGACTATCTGGGATGCAGGTGTAAGCCTTGAAATA
AGTCTACCCATGATAGGGCTGTTCAGAGTGGGTTGGGGCTGGAATTCGGTGTACGGAGAAAGCACAGATTATTCCGGAAC
CTTCTTCTTCGGAATAGGACCGGTCTTTTGA

Upstream 100 bases:

>100_bases
AAAAAAATTCTCGGTGATGATTTCTACTCCAATCCTATGAAGATGAAAAAAATAATGGAACTTTTAAATATGATGGAAAA
TTCATTGGGAGGTTAAGAAG

Downstream 100 bases:

>100_bases
TCGGAGCCAATCGACAACAAAAAAGGGGCTTTCAAGCCCCTTTTTTCTATTGTTGCCTGTTATAGCAAACCCGCAAAGAA
ATTTCTTGAAGCTCGCATGT

Product: surface antigen variable number repeat protein

Products: NA

Alternate protein names: Outer Membrane Protein; Surface Antigen Variable Number Repeat Protein

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MRKVSVLLLSFLIFSVIVMSGIVVKKIEITGNTILKDSEIRELLGIKLRTEIDRETLEASLGSLTDSGYFKNVDFSFDEA
SGLLSITVEEFPGADVEITFVGPKIADKDTLLASGVTIEDGKPLNPTRIIYEIPRSVEGLTETLKSLGYPEAFFDIEWDT
EPDKKDIMRGNVEDHIKIIFKIKPYYLWDVEIEAPLSERALEELKNTAKLKTFKSYYEAPGIIRLFMKESSYVPKASDIA
SAVRSIFSTYYVNPEGSWGLEKVYRALAFAYSNALKTAREVELPEGVEGQAKIITLSFKPASYIARPMEVKTIFFTGNEH
VSSLTLLNAVGIREGEVIDSEKIAKALQAIQEVYSKEGYPFTKQQVRIDENLGSLTFEITELKVGNINVEYVGEHKTRDY
LIQDKIVLKKGEVLSLKDYQNTYAFLNSTGYFDSVVINPIPSDGETLDVKIVLDEKDKNGKIMGGGGWQDGLMLNLDVGF
LNPFGYGQDISLKANVNFPVGGSKTTISTDETTGATITETSSPTYDLSFSYIVPKIFASNWDVGLSMKLRSTGKSTEEAT
ETAPDTIEATITEEREYRIDLALAPTYNLSAAEKIRTSAGFEYINIYTETATELRTATSTEVATSQTANTFYGLYTSLSY
SYSTRDDLLRPKNGTEFSARLYARGIFGNEPFAGVMFEFKKFIDLGPLPIAKGLGNPVLGFRARTDQLFPFNEYNKVFET
YLLSPGTYLRVKNGGLVVGNDVYGVTAASLQLRVPLVEIRGSMPLDFVLFGDLVYYREGANIADLIGNKTIWDAGVSLEI
SLPMIGLFRVGWGWNSVYGESTDYSGTFFFGIGPVF

Sequences:

>Translated_836_residues
MRKVSVLLLSFLIFSVIVMSGIVVKKIEITGNTILKDSEIRELLGIKLRTEIDRETLEASLGSLTDSGYFKNVDFSFDEA
SGLLSITVEEFPGADVEITFVGPKIADKDTLLASGVTIEDGKPLNPTRIIYEIPRSVEGLTETLKSLGYPEAFFDIEWDT
EPDKKDIMRGNVEDHIKIIFKIKPYYLWDVEIEAPLSERALEELKNTAKLKTFKSYYEAPGIIRLFMKESSYVPKASDIA
SAVRSIFSTYYVNPEGSWGLEKVYRALAFAYSNALKTAREVELPEGVEGQAKIITLSFKPASYIARPMEVKTIFFTGNEH
VSSLTLLNAVGIREGEVIDSEKIAKALQAIQEVYSKEGYPFTKQQVRIDENLGSLTFEITELKVGNINVEYVGEHKTRDY
LIQDKIVLKKGEVLSLKDYQNTYAFLNSTGYFDSVVINPIPSDGETLDVKIVLDEKDKNGKIMGGGGWQDGLMLNLDVGF
LNPFGYGQDISLKANVNFPVGGSKTTISTDETTGATITETSSPTYDLSFSYIVPKIFASNWDVGLSMKLRSTGKSTEEAT
ETAPDTIEATITEEREYRIDLALAPTYNLSAAEKIRTSAGFEYINIYTETATELRTATSTEVATSQTANTFYGLYTSLSY
SYSTRDDLLRPKNGTEFSARLYARGIFGNEPFAGVMFEFKKFIDLGPLPIAKGLGNPVLGFRARTDQLFPFNEYNKVFET
YLLSPGTYLRVKNGGLVVGNDVYGVTAASLQLRVPLVEIRGSMPLDFVLFGDLVYYREGANIADLIGNKTIWDAGVSLEI
SLPMIGLFRVGWGWNSVYGESTDYSGTFFFGIGPVF
>Mature_836_residues
MRKVSVLLLSFLIFSVIVMSGIVVKKIEITGNTILKDSEIRELLGIKLRTEIDRETLEASLGSLTDSGYFKNVDFSFDEA
SGLLSITVEEFPGADVEITFVGPKIADKDTLLASGVTIEDGKPLNPTRIIYEIPRSVEGLTETLKSLGYPEAFFDIEWDT
EPDKKDIMRGNVEDHIKIIFKIKPYYLWDVEIEAPLSERALEELKNTAKLKTFKSYYEAPGIIRLFMKESSYVPKASDIA
SAVRSIFSTYYVNPEGSWGLEKVYRALAFAYSNALKTAREVELPEGVEGQAKIITLSFKPASYIARPMEVKTIFFTGNEH
VSSLTLLNAVGIREGEVIDSEKIAKALQAIQEVYSKEGYPFTKQQVRIDENLGSLTFEITELKVGNINVEYVGEHKTRDY
LIQDKIVLKKGEVLSLKDYQNTYAFLNSTGYFDSVVINPIPSDGETLDVKIVLDEKDKNGKIMGGGGWQDGLMLNLDVGF
LNPFGYGQDISLKANVNFPVGGSKTTISTDETTGATITETSSPTYDLSFSYIVPKIFASNWDVGLSMKLRSTGKSTEEAT
ETAPDTIEATITEEREYRIDLALAPTYNLSAAEKIRTSAGFEYINIYTETATELRTATSTEVATSQTANTFYGLYTSLSY
SYSTRDDLLRPKNGTEFSARLYARGIFGNEPFAGVMFEFKKFIDLGPLPIAKGLGNPVLGFRARTDQLFPFNEYNKVFET
YLLSPGTYLRVKNGGLVVGNDVYGVTAASLQLRVPLVEIRGSMPLDFVLFGDLVYYREGANIADLIGNKTIWDAGVSLEI
SLPMIGLFRVGWGWNSVYGESTDYSGTFFFGIGPVF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 92771; Mature: 92771

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVSVLLLSFLIFSVIVMSGIVVKKIEITGNTILKDSEIRELLGIKLRTEIDRETLEAS
CCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECHHHHHHHHCCEEEHHHHHHHHHHH
LGSLTDSGYFKNVDFSFDEASGLLSITVEEFPGADVEITFVGPKIADKDTLLASGVTIED
HHCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEECCEEECC
GKPLNPTRIIYEIPRSVEGLTETLKSLGYPEAFFDIEWDTEPDKKDIMRGNVEDHIKIIF
CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEE
KIKPYYLWDVEIEAPLSERALEELKNTAKLKTFKSYYEAPGIIRLFMKESSYVPKASDIA
EECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHH
SAVRSIFSTYYVNPEGSWGLEKVYRALAFAYSNALKTAREVELPEGVEGQAKIITLSFKP
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
ASYIARPMEVKTIFFTGNEHVSSLTLLNAVGIREGEVIDSEKIAKALQAIQEVYSKEGYP
HHHHCCCEEEEEEEEECCCCHHHEEEEHHCCCCCCCEECHHHHHHHHHHHHHHHCCCCCC
FTKQQVRIDENLGSLTFEITELKVGNINVEYVGEHKTRDYLIQDKIVLKKGEVLSLKDYQ
CCHHEEEECCCCCCEEEEEEEEEECCEEEEEECCCCCCCEEEECEEEEECCCEEEEECCC
NTYAFLNSTGYFDSVVINPIPSDGETLDVKIVLDEKDKNGKIMGGGGWQDGLMLNLDVGF
CEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEECE
LNPFGYGQDISLKANVNFPVGGSKTTISTDETTGATITETSSPTYDLSFSYIVPKIFASN
ECCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEHHHHHHHHCCC
WDVGLSMKLRSTGKSTEEATETAPDTIEATITEEREYRIDLALAPTYNLSAAEKIRTSAG
CCCEEEEEEECCCCCCHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCC
FEYINIYTETATELRTATSTEVATSQTANTFYGLYTSLSYSYSTRDDLLRPKNGTEFSAR
CEEEEEEECCHHHHHCCCCCHHHCCCCCHHHEEEEHEEEECCCCHHHCCCCCCCCCEEEE
LYARGIFGNEPFAGVMFEFKKFIDLGPLPIAKGLGNPVLGFRARTDQLFPFNEYNKVFET
EEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
YLLSPGTYLRVKNGGLVVGNDVYGVTAASLQLRVPLVEIRGSMPLDFVLFGDLVYYREGA
HHCCCCCEEEEECCCEEECCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCEEEEECCC
NIADLIGNKTIWDAGVSLEISLPMIGLFRVGWGWNSVYGESTDYSGTFFFGIGPVF
CHHHHHCCCEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MRKVSVLLLSFLIFSVIVMSGIVVKKIEITGNTILKDSEIRELLGIKLRTEIDRETLEAS
CCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCEEECHHHHHHHHCCEEEHHHHHHHHHHH
LGSLTDSGYFKNVDFSFDEASGLLSITVEEFPGADVEITFVGPKIADKDTLLASGVTIED
HHCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEEECCEEECC
GKPLNPTRIIYEIPRSVEGLTETLKSLGYPEAFFDIEWDTEPDKKDIMRGNVEDHIKIIF
CCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEEE
KIKPYYLWDVEIEAPLSERALEELKNTAKLKTFKSYYEAPGIIRLFMKESSYVPKASDIA
EECCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHH
SAVRSIFSTYYVNPEGSWGLEKVYRALAFAYSNALKTAREVELPEGVEGQAKIITLSFKP
HHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
ASYIARPMEVKTIFFTGNEHVSSLTLLNAVGIREGEVIDSEKIAKALQAIQEVYSKEGYP
HHHHCCCEEEEEEEEECCCCHHHEEEEHHCCCCCCCEECHHHHHHHHHHHHHHHCCCCCC
FTKQQVRIDENLGSLTFEITELKVGNINVEYVGEHKTRDYLIQDKIVLKKGEVLSLKDYQ
CCHHEEEECCCCCCEEEEEEEEEECCEEEEEECCCCCCCEEEECEEEEECCCEEEEECCC
NTYAFLNSTGYFDSVVINPIPSDGETLDVKIVLDEKDKNGKIMGGGGWQDGLMLNLDVGF
CEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEECE
LNPFGYGQDISLKANVNFPVGGSKTTISTDETTGATITETSSPTYDLSFSYIVPKIFASN
ECCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCEEEEEHHHHHHHHCCC
WDVGLSMKLRSTGKSTEEATETAPDTIEATITEEREYRIDLALAPTYNLSAAEKIRTSAG
CCCEEEEEEECCCCCCHHHHCCCCCCEEEEEECCCEEEEEEEEECCCCCCHHHHHHHHCC
FEYINIYTETATELRTATSTEVATSQTANTFYGLYTSLSYSYSTRDDLLRPKNGTEFSAR
CEEEEEEECCHHHHHCCCCCHHHCCCCCHHHEEEEHEEEECCCCHHHCCCCCCCCCEEEE
LYARGIFGNEPFAGVMFEFKKFIDLGPLPIAKGLGNPVLGFRARTDQLFPFNEYNKVFET
EEEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
YLLSPGTYLRVKNGGLVVGNDVYGVTAASLQLRVPLVEIRGSMPLDFVLFGDLVYYREGA
HHCCCCCEEEEECCCEEECCCCCEEEEEEEEEEEEEEEECCCCCEEEEEECCEEEEECCC
NIADLIGNKTIWDAGVSLEISLPMIGLFRVGWGWNSVYGESTDYSGTFFFGIGPVF
CHHHHHCCCEEEECCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA