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The map label for this gene is gpsA [H]

Identifier: 239616413

GI number: 239616413

Start: 1460

End: 2434

Strand: Reverse

Name: gpsA [H]

Synonym: Kole_0002

Alternate gene names: 239616413

Gene position: 2434-1460 (Counterclockwise)

Preceding gene: 239616414

Following gene: NA

Centisome position: 0.11

GC content: 44.92

Gene sequence:

>975_bases
ATGAGAATAAGTGTAATAGGTGCTGGAAGCTGGGGAAGCACTATGGCAAAAGTACTTGCGGATAGCGGACATGACGTTAT
GCTATGGGTCAGGGAACCGGATCTGCTTGAACTTTTGAGAGAGGAAAGACGTTCTTATTTTGTGAAATCGCTGCACCTTC
CAAGCAATGTGGCATTAACCGGCAAACTCAACGAAGCGTTAGAATACGCCGATGTAATCTTTAATGCTGTTCCGGTACAG
TATATCTCAACTGTTTTTGGTGAACGGAATCTTGCAAATAAAAGTATCGTAAATCTCTCCAAGGGTCTCGAGATGAGTAC
TCACAGAAGACCATCTCAGATCTTTGAGTCTTTCGGAGCCAAAACAGTTTCAACTCTTTCCGGGCCGAGTTACGCTGAAG
AAGTAGCGAGAGAAATACCGACGAGTGTTGTTGTAGCAGCGAAAGACATTGAATTTGCCCGTTTTGTGAGGGATCTGTAT
AATGTTAAGTATTTCAGGGTTTACAGCAACGATGATCTGATTGGCGTTGAGATCGCCGGTGGAATAAAGAATGTCATTGC
GATAGCGGCCGGTATTATTGACGGTCTCGGAGGCTGGAACAACTCAAAAGCCGCGTTAATAACGCGAGCAACGGTCGAAA
TGGCCAGGCTGGGAGTAGCCCTGGGCGGAAAACCTGAAACCGTTGCAGGACTCGCCGGCGTTGGGGATCTTATTGTGACA
TGTACGGGAGTATACAGCCGAAACCGAAAAGTTGGCGAAGAACTAGCTAAAAAAAGAAAAATCGATGAAATACTCTCTTC
AATGAAAATGGTAGCAGAAGGAGTTGCTACCTGCAGAGCGATCTACCATCTTTCCAGAAAACTAAACATCGAACTTCCGA
TAGTCGAACAGGTTTATGCTGTTCTTTACGAAGAAAAGGAACCGAAGAAAGCGATAGAAGAGCTGATGACGAGAAAGAAA
AAGGATGAACGATGA

Upstream 100 bases:

>100_bases
TGGTCAAATTGGACAGTCACGGACTTCCCTTCCGAACTCCGGCAGTGAAAAAGGCTGTTTATGAACTTGGAAAGATTCTT
GAAAAGAGGAGGGGAGCACT

Downstream 100 bases:

>100_bases
TGGAACTGTGTTTCTATCCTGCAGCCGAGCTTGTAGCCATCGTGTTTAAAATTTTGGCCAGCTTTTCCTTTACCACTGTG
TTGCCTTTGATGACACTCAT

Product: Glycerol-3-phosphate dehydrogenase (NAD(P)(+))

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MRISVIGAGSWGSTMAKVLADSGHDVMLWVREPDLLELLREERRSYFVKSLHLPSNVALTGKLNEALEYADVIFNAVPVQ
YISTVFGERNLANKSIVNLSKGLEMSTHRRPSQIFESFGAKTVSTLSGPSYAEEVAREIPTSVVVAAKDIEFARFVRDLY
NVKYFRVYSNDDLIGVEIAGGIKNVIAIAAGIIDGLGGWNNSKAALITRATVEMARLGVALGGKPETVAGLAGVGDLIVT
CTGVYSRNRKVGEELAKKRKIDEILSSMKMVAEGVATCRAIYHLSRKLNIELPIVEQVYAVLYEEKEPKKAIEELMTRKK
KDER

Sequences:

>Translated_324_residues
MRISVIGAGSWGSTMAKVLADSGHDVMLWVREPDLLELLREERRSYFVKSLHLPSNVALTGKLNEALEYADVIFNAVPVQ
YISTVFGERNLANKSIVNLSKGLEMSTHRRPSQIFESFGAKTVSTLSGPSYAEEVAREIPTSVVVAAKDIEFARFVRDLY
NVKYFRVYSNDDLIGVEIAGGIKNVIAIAAGIIDGLGGWNNSKAALITRATVEMARLGVALGGKPETVAGLAGVGDLIVT
CTGVYSRNRKVGEELAKKRKIDEILSSMKMVAEGVATCRAIYHLSRKLNIELPIVEQVYAVLYEEKEPKKAIEELMTRKK
KDER
>Mature_324_residues
MRISVIGAGSWGSTMAKVLADSGHDVMLWVREPDLLELLREERRSYFVKSLHLPSNVALTGKLNEALEYADVIFNAVPVQ
YISTVFGERNLANKSIVNLSKGLEMSTHRRPSQIFESFGAKTVSTLSGPSYAEEVAREIPTSVVVAAKDIEFARFVRDLY
NVKYFRVYSNDDLIGVEIAGGIKNVIAIAAGIIDGLGGWNNSKAALITRATVEMARLGVALGGKPETVAGLAGVGDLIVT
CTGVYSRNRKVGEELAKKRKIDEILSSMKMVAEGVATCRAIYHLSRKLNIELPIVEQVYAVLYEEKEPKKAIEELMTRKK
KDER

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=331, Percent_Identity=30.2114803625378, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI24307999, Length=346, Percent_Identity=27.1676300578035, Blast_Score=122, Evalue=4e-28,
Organism=Escherichia coli, GI1790037, Length=333, Percent_Identity=38.7387387387387, Blast_Score=224, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI32564399, Length=350, Percent_Identity=28, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI193210136, Length=357, Percent_Identity=27.4509803921569, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI32564403, Length=357, Percent_Identity=27.4509803921569, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17507425, Length=338, Percent_Identity=27.2189349112426, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI193210134, Length=337, Percent_Identity=25.8160237388724, Blast_Score=87, Evalue=8e-18,
Organism=Saccharomyces cerevisiae, GI6324513, Length=359, Percent_Identity=28.133704735376, Blast_Score=123, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6320181, Length=361, Percent_Identity=28.808864265928, Blast_Score=113, Evalue=4e-26,
Organism=Drosophila melanogaster, GI17136204, Length=342, Percent_Identity=28.0701754385965, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17136200, Length=342, Percent_Identity=28.0701754385965, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17136202, Length=342, Percent_Identity=28.0701754385965, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI22026922, Length=341, Percent_Identity=26.3929618768328, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI45551945, Length=346, Percent_Identity=24.8554913294798, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI281362270, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35637; Mature: 35637

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRISVIGAGSWGSTMAKVLADSGHDVMLWVREPDLLELLREERRSYFVKSLHLPSNVALT
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
GKLNEALEYADVIFNAVPVQYISTVFGERNLANKSIVNLSKGLEMSTHRRPSQIFESFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
KTVSTLSGPSYAEEVAREIPTSVVVAAKDIEFARFVRDLYNVKYFRVYSNDDLIGVEIAG
HHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCEEEEEECCCCEEEEEECC
GIKNVIAIAAGIIDGLGGWNNSKAALITRATVEMARLGVALGGKPETVAGLAGVGDLIVT
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CTGVYSRNRKVGEELAKKRKIDEILSSMKMVAEGVATCRAIYHLSRKLNIELPIVEQVYA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VLYEEKEPKKAIEELMTRKKKDER
HHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRISVIGAGSWGSTMAKVLADSGHDVMLWVREPDLLELLREERRSYFVKSLHLPSNVALT
CEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
GKLNEALEYADVIFNAVPVQYISTVFGERNLANKSIVNLSKGLEMSTHRRPSQIFESFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHCC
KTVSTLSGPSYAEEVAREIPTSVVVAAKDIEFARFVRDLYNVKYFRVYSNDDLIGVEIAG
HHHHHCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCEEEEEECCCCEEEEEECC
GIKNVIAIAAGIIDGLGGWNNSKAALITRATVEMARLGVALGGKPETVAGLAGVGDLIVT
HHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
CTGVYSRNRKVGEELAKKRKIDEILSSMKMVAEGVATCRAIYHLSRKLNIELPIVEQVYA
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
VLYEEKEPKKAIEELMTRKKKDER
HHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA