| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238926037
Identifier: 238926037
GI number: 238926037
Start: 3434406
End: 3435449
Strand: Reverse
Name: 238926037
Synonym: EUBREC_3696
Alternate gene names: NA
Gene position: 3435449-3434406 (Counterclockwise)
Preceding gene: 238926038
Following gene: 238926036
Centisome position: 99.59
GC content: 36.97
Gene sequence:
>1044_bases ATGAGGATAAAAGCAGTCAGCAGCTTAGTTGGCGGTGAAGTACTTGCGGAACCAATACTAACAGAAAAAAATGATATTTT AATACCAAATGGCACAAGGATTAAGCCTGATTATGTGCCACTTATAGAGTCACTTGGAATAGAATCAGTGATGGTAGAGG ATCCGTATGAGAATTACGAAAGTCCGAATTCTATAGTAGACCCGGCTATTTTCGACAAATACGTGAAAAAAGTGCGTAGA CTGATGGAAAGCCATATATATCATGATGGCAAATCCTTAAAGGAATTTGAAATAATCGCAAATGATATTGTCCATGATAT AAATGATATGCCATATGACGTGATTGTTGATATAAAAGAGCGTAATTCGGACTTATATGAGCACACAGTCATGGTGACAC TTTTATCAGTACTTGTTGCAAGAAAGCTAAAGCTTGACGAAAAGCGAAAGTATAACATAGCGGTGGGATGTTTATTACAT GACATCGGGCTGCGTTTTATTGTCACACGATATAAAAACAGGGATTTTTCCAATGCAAATCCTGCGGAGCTTTTTGAATA TAAAAAGCATACCATTTTAGGATATTCGGCATTGGATGAGGAAAACTGGATAGCGCCAATATCAATGAAGATGGTTTTAT CACATCATGAAAATATGGCAGGCACAGGTTTTCCTATGAAGCAAAAGAATAAAGAACTGGAATGTAGAATAATTCAGGCA TGTGATGCGTTTGATTCGCTGATAAGCGGTATGGAGTGTAAGCGCATTTGTGTGCAGGAAGCCATAAATCAGATAAAGGA AAATGATGGCGGCAGATTTGATAACAAAATTATTAAGTGCCTGCTATCATCAATAGCCAGATATCCTGTCGGTACAACAG TAAAGACCAATGCTGAAGAAGAGGGAGTAGTAGTTTCCCAGACAGTAGATCCGGAGAATCCTATTATCATGATTTTTGGA AATGAAAATAATGGCAAATTGATGCTTCACAACAGATTGAATCTCATGCTTGATAAAAACATTTCAATTCTTCAGGTAAT TTAA
Upstream 100 bases:
>100_bases AATTCCATTATTGTTTTAGCAGATGAAGAGCAGGAAGCGTTGAATATGGCCAAGGAGGCAAATATGCCTGCAGAAAAATA ACAATGGGGTGTTTTAGTTT
Downstream 100 bases:
>100_bases AGAAAAGAGAAATAAGTAATGCACCAATTCCTCAGAGCAATAGGATTTTCAGATATAACAAAGAAACAGTTAAACGAGGT AATTAACAATATAATTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: HD-GYP Domain-Containing Protein; HD Domain Protein; Metal-Dependent Phosphohydrolase; HD Domain-Containing Protein; HDIG Domain-Containing Protein; HD-GYP Domain Protein; Metal-Dependent Phosphohydrolase HD Region; Metal-Dependent Phosphohydrolase Hd Subdomain; HD-GYP Hydrolase Domain Containing Protein; Domain HDIG Containing Protein; HDIG Domain Protein; HD-GYP Hydrolase Domain-Containing Protein; Metal-Dependent Phosphohydrolase Hd Region; GGDEF/GAF/HDIG Domain-Containing Protein; Metal Dependent Phosphohydrolase Domain-Containing Protein; C-Di-GMP Phosphodiesterase Class II; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; HD Family Metal-Dependent Phosphohydrolase; Two-Component System Response Regulator RpfG; Sensory Box Protein; Two-Component System Response Regulator; Response Regulator; HD-GYP Domain Containing Protein; TRAP Dicarboxylate Transporter Subunit DctM; HD-GYP Domain Metal-Dependent Phosphohydrolase; Metal Dependent Phosphohydrolase Domain Protein; HD GYP Domain-Containing Protein; Response Regulator With HD-GYP Domain; Metal Dependent Phosphohydrolase HD Region; HD Domain Containing Protein; Metal-Dependent Phosphohydrolase Hd Domain
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRIKAVSSLVGGEVLAEPILTEKNDILIPNGTRIKPDYVPLIESLGIESVMVEDPYENYESPNSIVDPAIFDKYVKKVRR LMESHIYHDGKSLKEFEIIANDIVHDINDMPYDVIVDIKERNSDLYEHTVMVTLLSVLVARKLKLDEKRKYNIAVGCLLH DIGLRFIVTRYKNRDFSNANPAELFEYKKHTILGYSALDEENWIAPISMKMVLSHHENMAGTGFPMKQKNKELECRIIQA CDAFDSLISGMECKRICVQEAINQIKENDGGRFDNKIIKCLLSSIARYPVGTTVKTNAEEEGVVVSQTVDPENPIIMIFG NENNGKLMLHNRLNLMLDKNISILQVI
Sequences:
>Translated_347_residues MRIKAVSSLVGGEVLAEPILTEKNDILIPNGTRIKPDYVPLIESLGIESVMVEDPYENYESPNSIVDPAIFDKYVKKVRR LMESHIYHDGKSLKEFEIIANDIVHDINDMPYDVIVDIKERNSDLYEHTVMVTLLSVLVARKLKLDEKRKYNIAVGCLLH DIGLRFIVTRYKNRDFSNANPAELFEYKKHTILGYSALDEENWIAPISMKMVLSHHENMAGTGFPMKQKNKELECRIIQA CDAFDSLISGMECKRICVQEAINQIKENDGGRFDNKIIKCLLSSIARYPVGTTVKTNAEEEGVVVSQTVDPENPIIMIFG NENNGKLMLHNRLNLMLDKNISILQVI >Mature_347_residues MRIKAVSSLVGGEVLAEPILTEKNDILIPNGTRIKPDYVPLIESLGIESVMVEDPYENYESPNSIVDPAIFDKYVKKVRR LMESHIYHDGKSLKEFEIIANDIVHDINDMPYDVIVDIKERNSDLYEHTVMVTLLSVLVARKLKLDEKRKYNIAVGCLLH DIGLRFIVTRYKNRDFSNANPAELFEYKKHTILGYSALDEENWIAPISMKMVLSHHENMAGTGFPMKQKNKELECRIIQA CDAFDSLISGMECKRICVQEAINQIKENDGGRFDNKIIKCLLSSIARYPVGTTVKTNAEEEGVVVSQTVDPENPIIMIFG NENNGKLMLHNRLNLMLDKNISILQVI
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39439; Mature: 39439
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKAVSSLVGGEVLAEPILTEKNDILIPNGTRIKPDYVPLIESLGIESVMVEDPYENYE CCCHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCEEEECCCHHHCC SPNSIVDPAIFDKYVKKVRRLMESHIYHDGKSLKEFEIIANDIVHDINDMPYDVIVDIKE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHH RNSDLYEHTVMVTLLSVLVARKLKLDEKRKYNIAVGCLLHDIGLRFIVTRYKNRDFSNAN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC PAELFEYKKHTILGYSALDEENWIAPISMKMVLSHHENMAGTGFPMKQKNKELECRIIQA HHHHHHHHHHEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH CDAFDSLISGMECKRICVQEAINQIKENDGGRFDNKIIKCLLSSIARYPVGTTVKTNAEE HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCC EGVVVSQTVDPENPIIMIFGNENNGKLMLHNRLNLMLDKNISILQVI CCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEECCCCEEEEEC >Mature Secondary Structure MRIKAVSSLVGGEVLAEPILTEKNDILIPNGTRIKPDYVPLIESLGIESVMVEDPYENYE CCCHHHHHHHCCHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHCCCCEEEECCCHHHCC SPNSIVDPAIFDKYVKKVRRLMESHIYHDGKSLKEFEIIANDIVHDINDMPYDVIVDIKE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEHH RNSDLYEHTVMVTLLSVLVARKLKLDEKRKYNIAVGCLLHDIGLRFIVTRYKNRDFSNAN CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC PAELFEYKKHTILGYSALDEENWIAPISMKMVLSHHENMAGTGFPMKQKNKELECRIIQA HHHHHHHHHHEEEEEHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH CDAFDSLISGMECKRICVQEAINQIKENDGGRFDNKIIKCLLSSIARYPVGTTVKTNAEE HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCC EGVVVSQTVDPENPIIMIFGNENNGKLMLHNRLNLMLDKNISILQVI CCEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA