| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238926014
Identifier: 238926014
GI number: 238926014
Start: 3416434
End: 3417690
Strand: Reverse
Name: 238926014
Synonym: EUBREC_3672
Alternate gene names: NA
Gene position: 3417690-3416434 (Counterclockwise)
Preceding gene: 238926015
Following gene: 238926013
Centisome position: 99.07
GC content: 38.42
Gene sequence:
>1257_bases ATGACATTCTGGGTATTGACATTTATTGCGGAAATGCTGGAAGTAAAAGGAACGCTATACTTTTTTGATACTTTTATGGA AAAAAGAGATGGCGGATATAGGAACAGATATAGATTTTTTGTTTATTGCGGAGTGCTTTATCTGGCAGCAGTCACAGGGG CATGGATCGGAATGTTAAAATGTATCCCGATTATACTGGTTATGTCTTTCCTAAATCTGGCTTATTATGAGGTCTCCTTC CGGCAGAGTTTTTTGTTTTCAATCATCAACTATACAATGCTTGTATTGATTGATTATGTGACTGTTTTGCTGGGAAGAGG AGGTTCAATCCAAGAAAAATGGTTTTTACAGGCACTGATATCAAAGACGGTTTTTATCATTCTGATGTTGTTTATCAGAA GATTTAGCAAGACAAGAAAAAGCTGCGGTCTGATTACAGGAAAAGAATGGTTACAGTTTTTCTGTGTTCCTGTATTTACG GTGGTCGGTTTCATTCTTATGTTTTATTCAGAAAACGATGATATGCAGAATGTATTTTTATTTCTTTCGGTGGGACTGGT TGCGATTAACCTTATCCTTATGGAGTTCATGCAGAATACCATTGAAAAAGAAGAGAGAATAAAAATTGCGGTACTTACGG AACAAAATCAGAAAAATCGTATTGCAGATTATCAGGATCGGGAAGAAATCTATGAGCGTCAGCGAAGAAAAATGCACGAT TATAAAAATCAGCTTTCCACGATCCAGACATTGATAAAGAATGGACACACAGATGAGGCACTTTCCTTTACGCAGAAGCT GACAGAGAGCATAGCTGTCGAGATGTCGGCAATCAACACAAATCATCCAGTGGTGAATGCTATTTTAAACCAGAAATACC GCAGTATGCAGGAAAAACACATAGCAGTGATCCTAAAAGTAGGGGATTTGCAGGAGATCTGTCTGGAGGAGGAAGAGATT GTGATTCTGCTCTCTAATTTATTGGATAATGCAATCCGGGAGAGTGAAAAGGTACTGAAAAATACCGGAAAAGCGGTCAT TCATCTGAAATTAGAGTGCGAAGATCATAAACTGATATTTGCGGTGAGAAATCCGGTGACAGAAAAGGTGGAAATTGAAA ATGACACGATAAAGAGCAAAAGAGGGGATCATCACGGCATTGGGCTGTTAAATGTAAAAGCAGTTGTGGATAAATATGGC GGCGACATGGTGCTTTCCTGCGATGAAAATGAATTTAAGGCTGTGGTTATCTTGTAA
Upstream 100 bases:
>100_bases TATGTGATGACACTTACCACGGGAAAAAAGATTCCGGTTCCCAAGGCACGATATGCACAGGTAAAGAGGGAATATATGCT GTATAAGGGAGAAGAATAAC
Downstream 100 bases:
>100_bases AGAGATGGTCTTTGTGTGCGTAATATGGTCGTTTGATGATATGGGACTAGGAGAACAGGTTATTTTATCCGATAAAAAAA TAGAGGAAATAAGTATGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Two-Component Sensor Histidine Kinase; Two-Component Sensor Kinase; Two-Component Sensor Histidine Kinases; Sensor Kinase Protein
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MTFWVLTFIAEMLEVKGTLYFFDTFMEKRDGGYRNRYRFFVYCGVLYLAAVTGAWIGMLKCIPIILVMSFLNLAYYEVSF RQSFLFSIINYTMLVLIDYVTVLLGRGGSIQEKWFLQALISKTVFIILMLFIRRFSKTRKSCGLITGKEWLQFFCVPVFT VVGFILMFYSENDDMQNVFLFLSVGLVAINLILMEFMQNTIEKEERIKIAVLTEQNQKNRIADYQDREEIYERQRRKMHD YKNQLSTIQTLIKNGHTDEALSFTQKLTESIAVEMSAINTNHPVVNAILNQKYRSMQEKHIAVILKVGDLQEICLEEEEI VILLSNLLDNAIRESEKVLKNTGKAVIHLKLECEDHKLIFAVRNPVTEKVEIENDTIKSKRGDHHGIGLLNVKAVVDKYG GDMVLSCDENEFKAVVIL
Sequences:
>Translated_418_residues MTFWVLTFIAEMLEVKGTLYFFDTFMEKRDGGYRNRYRFFVYCGVLYLAAVTGAWIGMLKCIPIILVMSFLNLAYYEVSF RQSFLFSIINYTMLVLIDYVTVLLGRGGSIQEKWFLQALISKTVFIILMLFIRRFSKTRKSCGLITGKEWLQFFCVPVFT VVGFILMFYSENDDMQNVFLFLSVGLVAINLILMEFMQNTIEKEERIKIAVLTEQNQKNRIADYQDREEIYERQRRKMHD YKNQLSTIQTLIKNGHTDEALSFTQKLTESIAVEMSAINTNHPVVNAILNQKYRSMQEKHIAVILKVGDLQEICLEEEEI VILLSNLLDNAIRESEKVLKNTGKAVIHLKLECEDHKLIFAVRNPVTEKVEIENDTIKSKRGDHHGIGLLNVKAVVDKYG GDMVLSCDENEFKAVVIL >Mature_417_residues TFWVLTFIAEMLEVKGTLYFFDTFMEKRDGGYRNRYRFFVYCGVLYLAAVTGAWIGMLKCIPIILVMSFLNLAYYEVSFR QSFLFSIINYTMLVLIDYVTVLLGRGGSIQEKWFLQALISKTVFIILMLFIRRFSKTRKSCGLITGKEWLQFFCVPVFTV VGFILMFYSENDDMQNVFLFLSVGLVAINLILMEFMQNTIEKEERIKIAVLTEQNQKNRIADYQDREEIYERQRRKMHDY KNQLSTIQTLIKNGHTDEALSFTQKLTESIAVEMSAINTNHPVVNAILNQKYRSMQEKHIAVILKVGDLQEICLEEEEIV ILLSNLLDNAIRESEKVLKNTGKAVIHLKLECEDHKLIFAVRNPVTEKVEIENDTIKSKRGDHHGIGLLNVKAVVDKYGG DMVLSCDENEFKAVVIL
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48404; Mature: 48272
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFWVLTFIAEMLEVKGTLYFFDTFMEKRDGGYRNRYRFFVYCGVLYLAAVTGAWIGMLK CCEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CIPIILVMSFLNLAYYEVSFRQSFLFSIINYTMLVLIDYVTVLLGRGGSIQEKWFLQALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SKTVFIILMLFIRRFSKTRKSCGLITGKEWLQFFCVPVFTVVGFILMFYSENDDMQNVFL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLSVGLVAINLILMEFMQNTIEKEERIKIAVLTEQNQKNRIADYQDREEIYERQRRKMHD HHHHHHHHHHHHHHHHHHHHHCHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH YKNQLSTIQTLIKNGHTDEALSFTQKLTESIAVEMSAINTNHPVVNAILNQKYRSMQEKH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC IAVILKVGDLQEICLEEEEIVILLSNLLDNAIRESEKVLKNTGKAVIHLKLECEDHKLIF EEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEE AVRNPVTEKVEIENDTIKSKRGDHHGIGLLNVKAVVDKYGGDMVLSCDENEFKAVVIL EECCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEC >Mature Secondary Structure TFWVLTFIAEMLEVKGTLYFFDTFMEKRDGGYRNRYRFFVYCGVLYLAAVTGAWIGMLK CEEHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH CIPIILVMSFLNLAYYEVSFRQSFLFSIINYTMLVLIDYVTVLLGRGGSIQEKWFLQALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH SKTVFIILMLFIRRFSKTRKSCGLITGKEWLQFFCVPVFTVVGFILMFYSENDDMQNVFL HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH FLSVGLVAINLILMEFMQNTIEKEERIKIAVLTEQNQKNRIADYQDREEIYERQRRKMHD HHHHHHHHHHHHHHHHHHHHHCHHHCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH YKNQLSTIQTLIKNGHTDEALSFTQKLTESIAVEMSAINTNHPVVNAILNQKYRSMQEKH HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCC IAVILKVGDLQEICLEEEEIVILLSNLLDNAIRESEKVLKNTGKAVIHLKLECEDHKLIF EEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEE AVRNPVTEKVEIENDTIKSKRGDHHGIGLLNVKAVVDKYGGDMVLSCDENEFKAVVIL EECCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA