| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925988
Identifier: 238925988
GI number: 238925988
Start: 3397469
End: 3398014
Strand: Reverse
Name: 238925988
Synonym: EUBREC_3646
Alternate gene names: NA
Gene position: 3398014-3397469 (Counterclockwise)
Preceding gene: 238925989
Following gene: 238925987
Centisome position: 98.5
GC content: 37.73
Gene sequence:
>546_bases ATGTATATTGGTTCTGGTCTGAATACCGTATCTTCATTGTACGGTCAACAAAAAGGTAATCAAATGAAAACTCCTGCATC TGGGGAAAAGACATTTTGTACGGTTGAAACACCAAAGGTATATCAGATATTCACAACAGATAATATGTTGTGGACGGGAG GTAATGGTACCGGTCTTTCTTATTGTCTTAAATATGCGGATGATTCGACGGATGAAAATCCTGTGGTGTTAGCGAAAGGT GTGGATGAAAACGGGAAAGAGTTTGAGCAAAGAATTTATATCAATGACGTTAATCCATCAAATGCTACAGTAGTCGAAAT GCGTGCATTGGAGGCACATTACAAAGTGGAGAAGCAGGGAGGTTTCACGTCTCTGCCGCTTGAAGCTGGTAATATGGGAC TTAACGACAGAAGAGATTTTATCTCAATGTTCAAAAAAAGCATAGAAGATTTAAACAAATTGGGAAGGTTTGACTTATCG TTGCTTTGGACGAAAAGTATGGATACATATCTTAATTTGCCAAATGCAAATAGTAAGTATAAATAG
Upstream 100 bases:
>100_bases TTTATCCTATAAAGGAAATAGAGGAATTGAGCAAATTGTTAACCATGAAAAATGTTTAGTCATATAGAAAAAATTTTGAT CTGATTGGAGGAACAGAAAT
Downstream 100 bases:
>100_bases TGCTTAGTCATTTGAACATAGGAAAAAAAGAGAACTTGGATTACATATCATATTGAGGCTGAGAGAAAGCCAACAGGTGA CACAGTCGGAAGAACTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MYIGSGLNTVSSLYGQQKGNQMKTPASGEKTFCTVETPKVYQIFTTDNMLWTGGNGTGLSYCLKYADDSTDENPVVLAKG VDENGKEFEQRIYINDVNPSNATVVEMRALEAHYKVEKQGGFTSLPLEAGNMGLNDRRDFISMFKKSIEDLNKLGRFDLS LLWTKSMDTYLNLPNANSKYK
Sequences:
>Translated_181_residues MYIGSGLNTVSSLYGQQKGNQMKTPASGEKTFCTVETPKVYQIFTTDNMLWTGGNGTGLSYCLKYADDSTDENPVVLAKG VDENGKEFEQRIYINDVNPSNATVVEMRALEAHYKVEKQGGFTSLPLEAGNMGLNDRRDFISMFKKSIEDLNKLGRFDLS LLWTKSMDTYLNLPNANSKYK >Mature_181_residues MYIGSGLNTVSSLYGQQKGNQMKTPASGEKTFCTVETPKVYQIFTTDNMLWTGGNGTGLSYCLKYADDSTDENPVVLAKG VDENGKEFEQRIYINDVNPSNATVVEMRALEAHYKVEKQGGFTSLPLEAGNMGLNDRRDFISMFKKSIEDLNKLGRFDLS LLWTKSMDTYLNLPNANSKYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20227; Mature: 20227
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIGSGLNTVSSLYGQQKGNQMKTPASGEKTFCTVETPKVYQIFTTDNMLWTGGNGTGLS CEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCHH YCLKYADDSTDENPVVLAKGVDENGKEFEQRIYINDVNPSNATVVEMRALEAHYKVEKQG HHEECCCCCCCCCCEEEEECCCCCCCCHHHEEEEEECCCCCCEEEEEEEHHHHHEEECCC GFTSLPLEAGNMGLNDRRDFISMFKKSIEDLNKLGRFDLSLLWTKSMDTYLNLPNANSKY CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCC K C >Mature Secondary Structure MYIGSGLNTVSSLYGQQKGNQMKTPASGEKTFCTVETPKVYQIFTTDNMLWTGGNGTGLS CEECCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCEEEECCCCCCHH YCLKYADDSTDENPVVLAKGVDENGKEFEQRIYINDVNPSNATVVEMRALEAHYKVEKQG HHEECCCCCCCCCCEEEEECCCCCCCCHHHEEEEEECCCCCCEEEEEEEHHHHHEEECCC GFTSLPLEAGNMGLNDRRDFISMFKKSIEDLNKLGRFDLSLLWTKSMDTYLNLPNANSKY CEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA