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The map label for this gene is 238925947

Identifier: 238925947

GI number: 238925947

Start: 3372824

End: 3373642

Strand: Reverse

Name: 238925947

Synonym: EUBREC_3605

Alternate gene names: NA

Gene position: 3373642-3372824 (Counterclockwise)

Preceding gene: 238925948

Following gene: 238925946

Centisome position: 97.8

GC content: 40.54

Gene sequence:

>819_bases
ATGGCAGATTTTGAATATTTCAGAGCAGAAGAATCTGACCAGTTTTCTTTTTTTCGGATCCCCAAAGCTCTGTTCACAGA
AAAAGAGTTTGCAAGCCTGTCCACAGACGCAAAGCTCCTTTATGGAATTCTGCTTGATCGAATCAGCCTATCCAAGAAAA
ATGGATGGATTGACAATGATGGTTATGTCTATATCATTTATACGATCGCAGAATTGCAGGAACTGTTGCGAATGTCGCAT
ACGACAGTGACAAAGCTTCTTTATGAGCTTGACAGTGTGCATGGGATTGGATTGATCGAACGGTATCGGCAGGGGAATAA
TCGTCCTTCTGTCATATACGTGAAAAATTTTGTGAAACGGAGCAGAGGAAAGCCAGTAAGATACTTTGCTTCTGGAACGC
CAGAAACTGGAAATCCAGACTGCAAGGAATTGGAAATCCGGATTGCAAGAAACTGGAAGTCCGGAACGCAAAAAAATAGA
AGTCCGGACTGCAAGAATCTGGATGGAAGTAATACTAAGATAAATAAGACTGAAAAGAATCATACTGATAAGAGTAAGGG
CAATACTCCCGCTTTGGAAGAAAAATTCAGTCAGTATGGTAGATTTAAAAATGTTGTTCTGTCGGAAGCTGAACTGCAGG
AGCTGATGACGCTATTTCCATGGGATTACCAGAAACGGATTGATCATCTTTCTGTTTATATGAAATCCAGTGGAAAAGAA
TATCAGAACCATTTTGCAACAATCTGTCTTTGGGCAGAAAGGGATGGAACCAGGATAGGAATGGATAAATATGAATTTCA
GGAAGGAGAAAGCCTGTGA

Upstream 100 bases:

>100_bases
TTAATGATGTGCTTCAACTTTGTGTTTAATGAGATGTGTCATGGAACAGGCAGTGCAGCAGGGTGTGATTTTAATAGTGA
GGAAGAATAGGAAATAAGCT

Downstream 100 bases:

>100_bases
TGGAAAATAAAGTAACAGCAGATTATGTGGACGAAGAGGGATGTCTTCATTGTGGCATCTGTGGAAAAAGAAAACAGATG
AAAGTCAGTCTGATGGGATT

Product: hypothetical protein

Products: NA

Alternate protein names: Replication Initiator A Domain Protein; Replication Initiator A Domain-Containing Protein; Phage Protein; Replication Protein; Replication-Associated Protein RepA; Replication Initiation Protein Rep; Replication Initiator A; Phage Replication Protein; Replication Initiator; Plasmid Replication Initiation Protein RepA; Replication Initiation Protein; RepA Protein; Replication Protein A

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDNDGYVYIIYTIAELQELLRMSH
TTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRSRGKPVRYFASGTPETGNPDCKELEIRIARNWKSGTQKNR
SPDCKNLDGSNTKINKTEKNHTDKSKGNTPALEEKFSQYGRFKNVVLSEAELQELMTLFPWDYQKRIDHLSVYMKSSGKE
YQNHFATICLWAERDGTRIGMDKYEFQEGESL

Sequences:

>Translated_272_residues
MADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDNDGYVYIIYTIAELQELLRMSH
TTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRSRGKPVRYFASGTPETGNPDCKELEIRIARNWKSGTQKNR
SPDCKNLDGSNTKINKTEKNHTDKSKGNTPALEEKFSQYGRFKNVVLSEAELQELMTLFPWDYQKRIDHLSVYMKSSGKE
YQNHFATICLWAERDGTRIGMDKYEFQEGESL
>Mature_271_residues
ADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDNDGYVYIIYTIAELQELLRMSHT
TVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKRSRGKPVRYFASGTPETGNPDCKELEIRIARNWKSGTQKNRS
PDCKNLDGSNTKINKTEKNHTDKSKGNTPALEEKFSQYGRFKNVVLSEAELQELMTLFPWDYQKRIDHLSVYMKSSGKEY
QNHFATICLWAERDGTRIGMDKYEFQEGESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31615; Mature: 31484

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDND
CCCCHHHCCCCCCCCHHEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
GYVYIIYTIAELQELLRMSHTTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKR
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHHH
SRGKPVRYFASGTPETGNPDCKELEIRIARNWKSGTQKNRSPDCKNLDGSNTKINKTEKN
HCCCCEEEEECCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCC
HTDKSKGNTPALEEKFSQYGRFKNVVLSEAELQELMTLFPWDYQKRIDHLSVYMKSSGKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
YQNHFATICLWAERDGTRIGMDKYEFQEGESL
HHHCEEEEEEEECCCCCEECCCHHHCCCCCCC
>Mature Secondary Structure 
ADFEYFRAEESDQFSFFRIPKALFTEKEFASLSTDAKLLYGILLDRISLSKKNGWIDND
CCCHHHCCCCCCCCHHEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCC
GYVYIIYTIAELQELLRMSHTTVTKLLYELDSVHGIGLIERYRQGNNRPSVIYVKNFVKR
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEHHHHHHH
SRGKPVRYFASGTPETGNPDCKELEIRIARNWKSGTQKNRSPDCKNLDGSNTKINKTEKN
HCCCCEEEEECCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCCC
HTDKSKGNTPALEEKFSQYGRFKNVVLSEAELQELMTLFPWDYQKRIDHLSVYMKSSGKE
CCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
YQNHFATICLWAERDGTRIGMDKYEFQEGESL
HHHCEEEEEEEECCCCCEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA