| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925925
Identifier: 238925925
GI number: 238925925
Start: 3357132
End: 3358763
Strand: Reverse
Name: 238925925
Synonym: EUBREC_3583
Alternate gene names: NA
Gene position: 3358763-3357132 (Counterclockwise)
Preceding gene: 238925926
Following gene: 238925924
Centisome position: 97.36
GC content: 55.58
Gene sequence:
>1632_bases ATGCTGTTGGCAACATTCAAACATATCAGCTCTAAAAATGCCGACTATGGCGCAGCGGAAGCCTACCTCACATTTGAGCA TGACGAGTTTACCATGAAGCCCACCCTTGATGAAAACGGGCGGCTGATACCGAGGGAGGACTACCGCATTTCTTCCCTTA ACTGCGGGGGCGAGGATTTCGCCGTTGCCTGTATGCGAGCCAATCTCCGCTATGAGAAAAACCAAAAACGGGAAGATGTG AAAAGCCACCACTATATCATCAGCTTTGACCCACGGGACGGGACAGACAACGGCTTGACCGTAGACCGGGCGCAGGAGCT GGGCGAGCAGTTCTGTAAAGAGCATTTCCCCGGACACCAAGCCCTTGTATGCACCCACCCGGACGGGCATAACCACAGCG GGAATATCCATGTGCATATCGTCCTCAACTCCCTGCGGATTTATGAAGTCCCGCTTCTGCCCTACATGGACAGACCAGCC GACACACGGGAGGGCTGCAAGCACCGCTGTACCAACGCCGCTATGGAATATTTCAAGAGTGAAGTTATGGAGATGTGCCA CCGGGAGGGGCTTTACCAAATCGACCTCTTGAACGGCAGCAAGGAACGGATAACAGAACGGGAATACTGGGCGGCAAAGA AAGGGCAGCTTGCCCTTGATAAAGAGAACGCCGCCAGAGAAGCCGCCGGACAACCGACCAAGCCCACCAAGTTTGAAACG GACAAGGCGAAGCTGCGCCGGACGATACGGCAGGCACTTTCCCAAGCTACCAGCTTTGACGAGTTTTCTTCCCTTTTGCT GCGGGAGGGCGTGACCGTCAAGGAGAGCCGGGGGCGGCTTTCCTACCTCACGCCGGACAGAACAAAGCCTATCACAGCCC GGAAGCTGGGGGACGATTTTGACAAGGCTGCTGTCCTTGCCCTGCTTACGCAGAACGCCCACAGAGCCGCCGAAAAGCCT AAAGCCATACCGGAATACCCACATACCCAAAAGGGACGCTTGCAGGAGGAAAAAACCGCAAAAACCGCCCCGGCAGACAA CACCTTGCAGCGCATGGTTGACCGGGAAGCCAAGCGAGCCGAGGGCAAGGGCGTGGGCTATGACCGCTGGGCGGCAAAGC ACAACCTAAAGCAGATGGCGGCTACCGTTACCGCCTACCAGCAGTACGGCTTTTCCTCCCCGGAGGAACTGGACGAAGCC TGTTCTGCCGCCTATGCCGCCATGCAGGAAAGCCTTACAGAGCTGAAGCAGGTGGAAAAGACGCTGAACAGGAAAAAGGA GCTGCAACGGCAGGTACTTGCCTATTCCAAGACCCGCCCTGTCCGGGACGGGCTGAAACAGCAGAAAAACGCCAAAGCAA AAGCAGCCTACCGACAGAAGCACGAAAGCGACTTTATCATAGCAGACGCAACCGCCCGTTATTTCAGGGAGAACGGCATT TCCAAGCTGCCGGGCTATAAAGCCTTGCAAGCAGAGATTGAAAGCCTTATCAAAGAGAAAAACAGCGGCTACAACGATTA CCGGGCAAAACGGGAGGAATACCGCCGCTTACAGACTGTCAAGGGCAATATCGACCAGATTTTACGCCGGAGCGAGCCGC AGCGCAGAAAGGAGCAGAGCCATGAACGGTAA
Upstream 100 bases:
>100_bases AACGAGTGGCACAGTCCCTACCCGCAGCTTGCCGGGGAAGTACGGGCGGCGGTTTCCGACCTTGCTGCCCTAAAGTTTGA AGTCTTGCAGAAAGTGGGTG
Downstream 100 bases:
>100_bases TATCCCCCGCATGGACTACCGCCAGTACCGGGCAGCCCGCCGCCTTGTGCATGAGTGCTGCAACTATGACAGCGGGAATT GTCTGCTTTTGGAGGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 543; Mature: 543
Protein sequence:
>543_residues MLLATFKHISSKNADYGAAEAYLTFEHDEFTMKPTLDENGRLIPREDYRISSLNCGGEDFAVACMRANLRYEKNQKREDV KSHHYIISFDPRDGTDNGLTVDRAQELGEQFCKEHFPGHQALVCTHPDGHNHSGNIHVHIVLNSLRIYEVPLLPYMDRPA DTREGCKHRCTNAAMEYFKSEVMEMCHREGLYQIDLLNGSKERITEREYWAAKKGQLALDKENAAREAAGQPTKPTKFET DKAKLRRTIRQALSQATSFDEFSSLLLREGVTVKESRGRLSYLTPDRTKPITARKLGDDFDKAAVLALLTQNAHRAAEKP KAIPEYPHTQKGRLQEEKTAKTAPADNTLQRMVDREAKRAEGKGVGYDRWAAKHNLKQMAATVTAYQQYGFSSPEELDEA CSAAYAAMQESLTELKQVEKTLNRKKELQRQVLAYSKTRPVRDGLKQQKNAKAKAAYRQKHESDFIIADATARYFRENGI SKLPGYKALQAEIESLIKEKNSGYNDYRAKREEYRRLQTVKGNIDQILRRSEPQRRKEQSHER
Sequences:
>Translated_543_residues MLLATFKHISSKNADYGAAEAYLTFEHDEFTMKPTLDENGRLIPREDYRISSLNCGGEDFAVACMRANLRYEKNQKREDV KSHHYIISFDPRDGTDNGLTVDRAQELGEQFCKEHFPGHQALVCTHPDGHNHSGNIHVHIVLNSLRIYEVPLLPYMDRPA DTREGCKHRCTNAAMEYFKSEVMEMCHREGLYQIDLLNGSKERITEREYWAAKKGQLALDKENAAREAAGQPTKPTKFET DKAKLRRTIRQALSQATSFDEFSSLLLREGVTVKESRGRLSYLTPDRTKPITARKLGDDFDKAAVLALLTQNAHRAAEKP KAIPEYPHTQKGRLQEEKTAKTAPADNTLQRMVDREAKRAEGKGVGYDRWAAKHNLKQMAATVTAYQQYGFSSPEELDEA CSAAYAAMQESLTELKQVEKTLNRKKELQRQVLAYSKTRPVRDGLKQQKNAKAKAAYRQKHESDFIIADATARYFRENGI SKLPGYKALQAEIESLIKEKNSGYNDYRAKREEYRRLQTVKGNIDQILRRSEPQRRKEQSHER >Mature_543_residues MLLATFKHISSKNADYGAAEAYLTFEHDEFTMKPTLDENGRLIPREDYRISSLNCGGEDFAVACMRANLRYEKNQKREDV KSHHYIISFDPRDGTDNGLTVDRAQELGEQFCKEHFPGHQALVCTHPDGHNHSGNIHVHIVLNSLRIYEVPLLPYMDRPA DTREGCKHRCTNAAMEYFKSEVMEMCHREGLYQIDLLNGSKERITEREYWAAKKGQLALDKENAAREAAGQPTKPTKFET DKAKLRRTIRQALSQATSFDEFSSLLLREGVTVKESRGRLSYLTPDRTKPITARKLGDDFDKAAVLALLTQNAHRAAEKP KAIPEYPHTQKGRLQEEKTAKTAPADNTLQRMVDREAKRAEGKGVGYDRWAAKHNLKQMAATVTAYQQYGFSSPEELDEA CSAAYAAMQESLTELKQVEKTLNRKKELQRQVLAYSKTRPVRDGLKQQKNAKAKAAYRQKHESDFIIADATARYFRENGI SKLPGYKALQAEIESLIKEKNSGYNDYRAKREEYRRLQTVKGNIDQILRRSEPQRRKEQSHER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62146; Mature: 62146
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLATFKHISSKNADYGAAEAYLTFEHDEFTMKPTLDENGRLIPREDYRISSLNCGGEDF CCEEHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHH AVACMRANLRYEKNQKREDVKSHHYIISFDPRDGTDNGLTVDRAQELGEQFCKEHFPGHQ HHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC ALVCTHPDGHNHSGNIHVHIVLNSLRIYEVPLLPYMDRPADTREGCKHRCTNAAMEYFKS EEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EVMEMCHREGLYQIDLLNGSKERITEREYWAAKKGQLALDKENAAREAAGQPTKPTKFET HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCC DKAKLRRTIRQALSQATSFDEFSSLLLREGVTVKESRGRLSYLTPDRTKPITARKLGDDF HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHHCCCCH DKAAVLALLTQNAHRAAEKPKAIPEYPHTQKGRLQEEKTAKTAPADNTLQRMVDREAKRA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH EGKGVGYDRWAAKHNLKQMAATVTAYQQYGFSSPEELDEACSAAYAAMQESLTELKQVEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLNRKKELQRQVLAYSKTRPVRDGLKQQKNAKAKAAYRQKHESDFIIADATARYFRENGI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC SKLPGYKALQAEIESLIKEKNSGYNDYRAKREEYRRLQTVKGNIDQILRRSEPQRRKEQS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHC HER CCC >Mature Secondary Structure MLLATFKHISSKNADYGAAEAYLTFEHDEFTMKPTLDENGRLIPREDYRISSLNCGGEDF CCEEHHHHHHCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCEEEECCCCCHHH AVACMRANLRYEKNQKREDVKSHHYIISFDPRDGTDNGLTVDRAQELGEQFCKEHFPGHQ HHHHHHHCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC ALVCTHPDGHNHSGNIHVHIVLNSLRIYEVPLLPYMDRPADTREGCKHRCTNAAMEYFKS EEEEECCCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EVMEMCHREGLYQIDLLNGSKERITEREYWAAKKGQLALDKENAAREAAGQPTKPTKFET HHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHCCCCCCCCCCCC DKAKLRRTIRQALSQATSFDEFSSLLLREGVTVKESRGRLSYLTPDRTKPITARKLGDDF HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCEEECCCCCCCCCHHHHCCCCH DKAAVLALLTQNAHRAAEKPKAIPEYPHTQKGRLQEEKTAKTAPADNTLQRMVDREAKRA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHH EGKGVGYDRWAAKHNLKQMAATVTAYQQYGFSSPEELDEACSAAYAAMQESLTELKQVEK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLNRKKELQRQVLAYSKTRPVRDGLKQQKNAKAKAAYRQKHESDFIIADATARYFRENGI HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEHHHHHHHHHCCC SKLPGYKALQAEIESLIKEKNSGYNDYRAKREEYRRLQTVKGNIDQILRRSEPQRRKEQS CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHC HER CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA