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The map label for this gene is yoqW [H]

Identifier: 238925892

GI number: 238925892

Start: 3313479

End: 3314063

Strand: Reverse

Name: yoqW [H]

Synonym: EUBREC_3550

Alternate gene names: 238925892

Gene position: 3314063-3313479 (Counterclockwise)

Preceding gene: 238925893

Following gene: 238925891

Centisome position: 96.07

GC content: 38.8

Gene sequence:

>585_bases
ATGTGTGGTAGATATTATATTGATTCTGATATGGCAGATGAAATCGAAAAAGTAGTGCATGATATAGACCAACGGATCCG
GCAGGAACATTTTGCAGGAGATATCTTTCCAACCAATGTAGCACCGATCATTGAAAAATCAGAACATGGATTGAAACTGG
ATGTTTGCAAGTGGGGATATCCATTGTCACAAGGAAAGAATCTGGTTATAAATGCAAGAGCAGAATCTGTTATGGATAAA
CCTTCTTTTCGAAATGGAATCCTCTATCACCGCATTTTGATACCGGCAAGTGGGTTCTATGAATGGAATCGGTTAAAAGA
GAAAAATACATTTTCCAGATATGATGCACCAGTATTGTATATGGCTGGCTTCTGTGATTGGTTTGAGAATGAACGACGAT
TTGTGATTATGACTACAGCAGCCAATGAATCTATGATAAAAGTACATGATCGTATGCCGCTGATATTGGAAAAAGGACAG
CTGAAAGATTGGTTCGATGACAGGAAAATGGAGCAAATTCTGCATCAGGTACCGGTTCAGCTAAAACGAGAGGCAGAATA
CGAACAGCAGAGCTTATTCTTATAA

Upstream 100 bases:

>100_bases
TATGGGGTGGATTCAAAATTATAAATTAACTGAGTTTAAAGTGCCTAGAAATAAATGATGTATATTTGATGAAATAGAAT
CTATAAGTGAAGGAAGTATT

Downstream 100 bases:

>100_bases
TGGTTCAGAGGAGAAATAGAAAGATGCAAATATTTGTTGATGCAGATGCCTGCCCAGTGGTTGCGATCATTGAAAAGATT
GCAAAAGATAATAGTGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MCGRYYIDSDMADEIEKVVHDIDQRIRQEHFAGDIFPTNVAPIIEKSEHGLKLDVCKWGYPLSQGKNLVINARAESVMDK
PSFRNGILYHRILIPASGFYEWNRLKEKNTFSRYDAPVLYMAGFCDWFENERRFVIMTTAANESMIKVHDRMPLILEKGQ
LKDWFDDRKMEQILHQVPVQLKREAEYEQQSLFL

Sequences:

>Translated_194_residues
MCGRYYIDSDMADEIEKVVHDIDQRIRQEHFAGDIFPTNVAPIIEKSEHGLKLDVCKWGYPLSQGKNLVINARAESVMDK
PSFRNGILYHRILIPASGFYEWNRLKEKNTFSRYDAPVLYMAGFCDWFENERRFVIMTTAANESMIKVHDRMPLILEKGQ
LKDWFDDRKMEQILHQVPVQLKREAEYEQQSLFL
>Mature_194_residues
MCGRYYIDSDMADEIEKVVHDIDQRIRQEHFAGDIFPTNVAPIIEKSEHGLKLDVCKWGYPLSQGKNLVINARAESVMDK
PSFRNGILYHRILIPASGFYEWNRLKEKNTFSRYDAPVLYMAGFCDWFENERRFVIMTTAANESMIKVHDRMPLILEKGQ
LKDWFDDRKMEQILHQVPVQLKREAEYEQQSLFL

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Escherichia coli, GI48994894, Length=178, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 22908; Mature: 22908

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRYYIDSDMADEIEKVVHDIDQRIRQEHFAGDIFPTNVAPIIEKSEHGLKLDVCKWGY
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCC
PLSQGKNLVINARAESVMDKPSFRNGILYHRILIPASGFYEWNRLKEKNTFSRYDAPVLY
CCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHCCCCHHH
MAGFCDWFENERRFVIMTTAANESMIKVHDRMPLILEKGQLKDWFDDRKMEQILHQVPVQ
HHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHH
LKREAEYEQQSLFL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MCGRYYIDSDMADEIEKVVHDIDQRIRQEHFAGDIFPTNVAPIIEKSEHGLKLDVCKWGY
CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCC
PLSQGKNLVINARAESVMDKPSFRNGILYHRILIPASGFYEWNRLKEKNTFSRYDAPVLY
CCCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHCCCCHHHCCCCHHH
MAGFCDWFENERRFVIMTTAANESMIKVHDRMPLILEKGQLKDWFDDRKMEQILHQVPVQ
HHHHHHHHCCCCEEEEEEECCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHHCCHH
LKREAEYEQQSLFL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]