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The map label for this gene is rlx [H]

Identifier: 238925889

GI number: 238925889

Start: 3311073

End: 3312452

Strand: Direct

Name: rlx [H]

Synonym: EUBREC_3547

Alternate gene names: 238925889

Gene position: 3311073-3312452 (Clockwise)

Preceding gene: 238925888

Following gene: 238925927

Centisome position: 95.98

GC content: 40.72

Gene sequence:

>1380_bases
ATGGCATATATTAAGATCTTCCCCATTAAAGTAACAGACAAGAAAGCTCTGGACTATATCACGAATCCAGACAAGACTGA
TGAAAAACTGCTGGTTTCCAGTTTTGGCTGTTCCCCGGAAACTGCTGATCTCGAATTTTCCATGACTAGAGAAATGGCAA
AAAAGAATGGAATGGACAAAGGTAATAACCTGGCATTTCATCTGATCCAGTCATTTAAACCTGGAGAAGTTGATGCCGAA
ACTGCCCATCGCTTAGGACAGCAATTTGCAGCCGAAGTACTGAAAGGAAAATATGAATACGTGATCAGTACCCATGTTGA
TAAAAAGCACATTCATAACCATATCATCTTCAACGCTGCAAGCTTTGTTGATCATCACAAGTATGTTTCCAATAAGCGGA
GCTACCATAAACTCTGCAGAATCAGTAATCGTATCTGCCTGGAAAATGGACTTGCCACCAGTATGCCAACCGGAGAAAAA
GGAAAAAGCTATAAAGAGAACATGGAATATCATCGTGGCACCAGTTGGAAAGCCAAGCTACGTGTTGCAGTTGATAAAGC
AATCTGGACTTCCATCAACTATGAGGAATTTCTACAAAAAATGCAGTTAGCTGGATATGAAGTCCGGCAGGGAAAGCATC
TTTCTTTCCGTGCACCGGAACAAAAAAATTTCACTTATATGAAATCTCTGGGAAGTTATTATACGGAAGAAAACGTCCGC
ATCCACTTAGCTAAAAATCGTAGCAAAGTGAAAACTCCAAAACATCTGTCCAGAGAAGCTCGCCTGTATATCAATATCTC
CACGTATGTAACGACTGGCAATCGAGAAGGATTTGAACATTGGGCAAAACTCAATAATCTAAAAGAGGCAGCCCGCACCT
TCAACTATCTTTCAGAAAATAACCTACTGAATTATGAGGATTTCAGGCAGCATGTTTCTGATGTTGATGCTTCTGTTAAA
GCGGCTGATCAGAGAATAGCACACATCACCAGTGAGCTAAGCACGCAGAAAGTCATTCAGAAACACTGTGATTCTTACCG
GCTCTGCCGTAAAGTGATAGAAGATTGCAAATCTGCAAAAAATCCAAAAGAATACCGTTCCAAGCATCTGGCAGAATACC
AACTCCACGATTCACTAAAAAAAGAGCTTCAGGATCTCGGTGTTACCAAAATCCCTAGCTCTGAAAAAATCCAGAAGCGG
ATTGAAAATCTTGAATCTGAACAAGCTGCTACCGTCCGGGAAAAACAGAAATTACAGAAAAAGCAGAAAACACTGGATAT
CATTCAGCAAAATTTCTCTGTGCTGCTCGATGCTCCTGAAATCAATTCAGACTTACTTCCGGCAAAACGGGAACCTGTTT
CTGTCACAAGAGATAAATAA

Upstream 100 bases:

>100_bases
AGATTGGCATAAATATCAACCAGATTGCAAAAAAGGTAAATACCACCGGAGATCTATATCCGGAAGAAATGCAAGAATTG
AAAGAGATGGTGAAAGAACT

Downstream 100 bases:

>100_bases
GATTGCACTGACAACTCAATTATTCTCTTCCAAATCTTCCCAAGGTTTCAGACCCATTTCCTCCCAGGTGACACCATACG
GTGCACCTCCGGAGGTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MAYIKIFPIKVTDKKALDYITNPDKTDEKLLVSSFGCSPETADLEFSMTREMAKKNGMDKGNNLAFHLIQSFKPGEVDAE
TAHRLGQQFAAEVLKGKYEYVISTHVDKKHIHNHIIFNAASFVDHHKYVSNKRSYHKLCRISNRICLENGLATSMPTGEK
GKSYKENMEYHRGTSWKAKLRVAVDKAIWTSINYEEFLQKMQLAGYEVRQGKHLSFRAPEQKNFTYMKSLGSYYTEENVR
IHLAKNRSKVKTPKHLSREARLYINISTYVTTGNREGFEHWAKLNNLKEAARTFNYLSENNLLNYEDFRQHVSDVDASVK
AADQRIAHITSELSTQKVIQKHCDSYRLCRKVIEDCKSAKNPKEYRSKHLAEYQLHDSLKKELQDLGVTKIPSSEKIQKR
IENLESEQAATVREKQKLQKKQKTLDIIQQNFSVLLDAPEINSDLLPAKREPVSVTRDK

Sequences:

>Translated_459_residues
MAYIKIFPIKVTDKKALDYITNPDKTDEKLLVSSFGCSPETADLEFSMTREMAKKNGMDKGNNLAFHLIQSFKPGEVDAE
TAHRLGQQFAAEVLKGKYEYVISTHVDKKHIHNHIIFNAASFVDHHKYVSNKRSYHKLCRISNRICLENGLATSMPTGEK
GKSYKENMEYHRGTSWKAKLRVAVDKAIWTSINYEEFLQKMQLAGYEVRQGKHLSFRAPEQKNFTYMKSLGSYYTEENVR
IHLAKNRSKVKTPKHLSREARLYINISTYVTTGNREGFEHWAKLNNLKEAARTFNYLSENNLLNYEDFRQHVSDVDASVK
AADQRIAHITSELSTQKVIQKHCDSYRLCRKVIEDCKSAKNPKEYRSKHLAEYQLHDSLKKELQDLGVTKIPSSEKIQKR
IENLESEQAATVREKQKLQKKQKTLDIIQQNFSVLLDAPEINSDLLPAKREPVSVTRDK
>Mature_458_residues
AYIKIFPIKVTDKKALDYITNPDKTDEKLLVSSFGCSPETADLEFSMTREMAKKNGMDKGNNLAFHLIQSFKPGEVDAET
AHRLGQQFAAEVLKGKYEYVISTHVDKKHIHNHIIFNAASFVDHHKYVSNKRSYHKLCRISNRICLENGLATSMPTGEKG
KSYKENMEYHRGTSWKAKLRVAVDKAIWTSINYEEFLQKMQLAGYEVRQGKHLSFRAPEQKNFTYMKSLGSYYTEENVRI
HLAKNRSKVKTPKHLSREARLYINISTYVTTGNREGFEHWAKLNNLKEAARTFNYLSENNLLNYEDFRQHVSDVDASVKA
ADQRIAHITSELSTQKVIQKHCDSYRLCRKVIEDCKSAKNPKEYRSKHLAEYQLHDSLKKELQDLGVTKIPSSEKIQKRI
ENLESEQAATVREKQKLQKKQKTLDIIQQNFSVLLDAPEINSDLLPAKREPVSVTRDK

Specific function: This protein is probably required for relaxation complex formation and plasmid mobilization by conjugative plasmids [H]

COG id: COG3843

COG function: function code U; Type IV secretory pathway, VirD2 components (relaxase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005094 [H]

Pfam domain/function: PF03432 Relaxase [H]

EC number: NA

Molecular weight: Translated: 53022; Mature: 52891

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYIKIFPIKVTDKKALDYITNPDKTDEKLLVSSFGCSPETADLEFSMTREMAKKNGMDK
CCEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
GNNLAFHLIQSFKPGEVDAETAHRLGQQFAAEVLKGKYEYVISTHVDKKHIHNHIIFNAA
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHH
SFVDHHKYVSNKRSYHKLCRISNRICLENGLATSMPTGEKGKSYKENMEYHRGTSWKAKL
HHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
RVAVDKAIWTSINYEEFLQKMQLAGYEVRQGKHLSFRAPEQKNFTYMKSLGSYYTEENVR
EEEEHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCE
IHLAKNRSKVKTPKHLSREARLYINISTYVTTGNREGFEHWAKLNNLKEAARTFNYLSEN
EEEECCCCCCCCCHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NLLNYEDFRQHVSDVDASVKAADQRIAHITSELSTQKVIQKHCDSYRLCRKVIEDCKSAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPKEYRSKHLAEYQLHDSLKKELQDLGVTKIPSSEKIQKRIENLESEQAATVREKQKLQK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQKTLDIIQQNFSVLLDAPEINSDLLPAKREPVSVTRDK
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AYIKIFPIKVTDKKALDYITNPDKTDEKLLVSSFGCSPETADLEFSMTREMAKKNGMDK
CEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
GNNLAFHLIQSFKPGEVDAETAHRLGQQFAAEVLKGKYEYVISTHVDKKHIHNHIIFNAA
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCHHHHHHHHHHHHH
SFVDHHKYVSNKRSYHKLCRISNRICLENGLATSMPTGEKGKSYKENMEYHRGTSWKAKL
HHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
RVAVDKAIWTSINYEEFLQKMQLAGYEVRQGKHLSFRAPEQKNFTYMKSLGSYYTEENVR
EEEEHHHHHHCCCHHHHHHHHHHCCCHHCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCE
IHLAKNRSKVKTPKHLSREARLYINISTYVTTGNREGFEHWAKLNNLKEAARTFNYLSEN
EEEECCCCCCCCCHHHCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCC
NLLNYEDFRQHVSDVDASVKAADQRIAHITSELSTQKVIQKHCDSYRLCRKVIEDCKSAK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NPKEYRSKHLAEYQLHDSLKKELQDLGVTKIPSSEKIQKRIENLESEQAATVREKQKLQK
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQKTLDIIQQNFSVLLDAPEINSDLLPAKREPVSVTRDK
HHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA