| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925858
Identifier: 238925858
GI number: 238925858
Start: 3286765
End: 3287994
Strand: Reverse
Name: 238925858
Synonym: EUBREC_3516
Alternate gene names: NA
Gene position: 3287994-3286765 (Counterclockwise)
Preceding gene: 238925859
Following gene: 238925855
Centisome position: 95.31
GC content: 40.41
Gene sequence:
>1230_bases TTGAAGAAGTATGTATTAGGTGCTTTTATTGGATTTTTGTTGCTGATGTCCGGATGCAGGGATCGACAGGATGGAGTCCA TACAGAGGATACGGATTTGCAGAAAGAAAAATTAACCATCATGCACGTAGATGCAGAATCTCCCGGATTCAGAAAATTTA TAGAAAATGCAGAAAAAGAACTGAATCTTGAGATAGAGACGATAGCCTGCCCTGCAGATGCAGATGTGCGGCAGGCTAAA ATCTCCACGATTCTGGAAGCCGGAGATTCTTCAATCGATATCTTCTCTGTCAATGATGAGATGATCAGTGAATTTAAATA CAAAGATTATCTGAAACCATTGAACGATACGGTGATGACGAAAGAACTGTTATCCAGTTATCCGGAAAGTTATATGCAGA ATGTACCGATGAAAGATGGTAAAGTTTATTCTGTCCCCTACCTTATGGATATTATGGTATTCTGGGTAAACCGGGAAGTC ACAGGAGACCGGGAGATCCGGACGCAGGAAGATTTTGCTGCCTTTTTGAAAGAAAACCTGGGCAACGATGTCTACGGATA TGGAGGAGCATGGGATCAGTCTTATGTGTACAATGAACTTTCGGAATTTGTAAATCTCTTCGGAGGAGACTATTACGACT GGGAGAATAAAAACACGAGAGAAGCACTCAGCTTTCTTCACGATCTGACAGCAAACGGAGAAGTTCCGATTTCACAGATC ACAGACCGGTATGAACAAATTGAACAGAAATTTTTGGATGGAAAATACGGCAGTATTTTTATGTATAGCGGAGCCATAAA CACTTTTGAATGTGCCGGAGCTTACAGAATGGAAAAAATCCAGGTGGCACCATTACCGGGATTTCGAAAGAATGCTACCA ACATCGCTACATGGCAGTATGTGTTAAACAAGGCATCTGAGCATGAGAAAGCGGCAATAAAATTCCTGAAATATGCCGCA AGCAGAGAAGGAAATATTGCTTATGCAGAATGCATGAAACGTCTTCCGGCCAGACTTGATGTGATTCGTGAAGAAAAATT GGATATCCCAGGATTTCAGGTCTTTCAGGATTATGTGAATCATGTTGAATTGAAGGAACGTCCGTTTTCTTCAAATCCAA TGAAGGATATCTCTAAGACCGGCATATTATTTCAACAATATGTGATGGATCAAATATCTCAGGATGAATTTTGTGAGAAA ATGGAAGAAATGCAAAAAAATCAGAGATAG
Upstream 100 bases:
>100_bases TGATGTGGCAAGTGTGGCATACTGGTATCAGGCAGAACCACATAACAGCTTCCCGGAACTTCCTGGAAAAGAAGAACGCT GGCCTAGATAGGAGCAGAAC
Downstream 100 bases:
>100_bases TTAAAGAAACAGAGCAAATCGAAAAAAACGATTTGCTCTGTTTCTTTGTTTGTACGGCAGCGCCACGAGGCATATTTTGG TCATTAAAGTGTATTGTACG
Product: ABC transporter (substrate-binding protein)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MKKYVLGAFIGFLLLMSGCRDRQDGVHTEDTDLQKEKLTIMHVDAESPGFRKFIENAEKELNLEIETIACPADADVRQAK ISTILEAGDSSIDIFSVNDEMISEFKYKDYLKPLNDTVMTKELLSSYPESYMQNVPMKDGKVYSVPYLMDIMVFWVNREV TGDREIRTQEDFAAFLKENLGNDVYGYGGAWDQSYVYNELSEFVNLFGGDYYDWENKNTREALSFLHDLTANGEVPISQI TDRYEQIEQKFLDGKYGSIFMYSGAINTFECAGAYRMEKIQVAPLPGFRKNATNIATWQYVLNKASEHEKAAIKFLKYAA SREGNIAYAECMKRLPARLDVIREEKLDIPGFQVFQDYVNHVELKERPFSSNPMKDISKTGILFQQYVMDQISQDEFCEK MEEMQKNQR
Sequences:
>Translated_409_residues MKKYVLGAFIGFLLLMSGCRDRQDGVHTEDTDLQKEKLTIMHVDAESPGFRKFIENAEKELNLEIETIACPADADVRQAK ISTILEAGDSSIDIFSVNDEMISEFKYKDYLKPLNDTVMTKELLSSYPESYMQNVPMKDGKVYSVPYLMDIMVFWVNREV TGDREIRTQEDFAAFLKENLGNDVYGYGGAWDQSYVYNELSEFVNLFGGDYYDWENKNTREALSFLHDLTANGEVPISQI TDRYEQIEQKFLDGKYGSIFMYSGAINTFECAGAYRMEKIQVAPLPGFRKNATNIATWQYVLNKASEHEKAAIKFLKYAA SREGNIAYAECMKRLPARLDVIREEKLDIPGFQVFQDYVNHVELKERPFSSNPMKDISKTGILFQQYVMDQISQDEFCEK MEEMQKNQR >Mature_409_residues MKKYVLGAFIGFLLLMSGCRDRQDGVHTEDTDLQKEKLTIMHVDAESPGFRKFIENAEKELNLEIETIACPADADVRQAK ISTILEAGDSSIDIFSVNDEMISEFKYKDYLKPLNDTVMTKELLSSYPESYMQNVPMKDGKVYSVPYLMDIMVFWVNREV TGDREIRTQEDFAAFLKENLGNDVYGYGGAWDQSYVYNELSEFVNLFGGDYYDWENKNTREALSFLHDLTANGEVPISQI TDRYEQIEQKFLDGKYGSIFMYSGAINTFECAGAYRMEKIQVAPLPGFRKNATNIATWQYVLNKASEHEKAAIKFLKYAA SREGNIAYAECMKRLPARLDVIREEKLDIPGFQVFQDYVNHVELKERPFSSNPMKDISKTGILFQQYVMDQISQDEFCEK MEEMQKNQR
Specific function: Unknown
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47198; Mature: 47198
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYVLGAFIGFLLLMSGCRDRQDGVHTEDTDLQKEKLTIMHVDAESPGFRKFIENAEKE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHH LNLEIETIACPADADVRQAKISTILEAGDSSIDIFSVNDEMISEFKYKDYLKPLNDTVMT CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHH KELLSSYPESYMQNVPMKDGKVYSVPYLMDIMVFWVNREVTGDREIRTQEDFAAFLKENL HHHHHHCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC GNDVYGYGGAWDQSYVYNELSEFVNLFGGDYYDWENKNTREALSFLHDLTANGEVPISQI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TDRYEQIEQKFLDGKYGSIFMYSGAINTFECAGAYRMEKIQVAPLPGFRKNATNIATWQY HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCHHHCEEEECCCCCCCCCCCHHHHHHH VLNKASEHEKAAIKFLKYAASREGNIAYAECMKRLPARLDVIREEKLDIPGFQVFQDYVN HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HVELKERPFSSNPMKDISKTGILFQQYVMDQISQDEFCEKMEEMQKNQR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKYVLGAFIGFLLLMSGCRDRQDGVHTEDTDLQKEKLTIMHVDAESPGFRKFIENAEKE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCEEEEEECCCCCHHHHHHHHHHHH LNLEIETIACPADADVRQAKISTILEAGDSSIDIFSVNDEMISEFKYKDYLKPLNDTVMT CCEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHH KELLSSYPESYMQNVPMKDGKVYSVPYLMDIMVFWVNREVTGDREIRTQEDFAAFLKENL HHHHHHCCHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC GNDVYGYGGAWDQSYVYNELSEFVNLFGGDYYDWENKNTREALSFLHDLTANGEVPISQI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHH TDRYEQIEQKFLDGKYGSIFMYSGAINTFECAGAYRMEKIQVAPLPGFRKNATNIATWQY HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCHHHCEEEECCCCCCCCCCCHHHHHHH VLNKASEHEKAAIKFLKYAASREGNIAYAECMKRLPARLDVIREEKLDIPGFQVFQDYVN HHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH HVELKERPFSSNPMKDISKTGILFQQYVMDQISQDEFCEKMEEMQKNQR HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA