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The map label for this gene is 238925832

Identifier: 238925832

GI number: 238925832

Start: 3269185

End: 3270093

Strand: Reverse

Name: 238925832

Synonym: EUBREC_3490

Alternate gene names: NA

Gene position: 3270093-3269185 (Counterclockwise)

Preceding gene: 238925833

Following gene: 238925831

Centisome position: 94.79

GC content: 44.88

Gene sequence:

>909_bases
ATGGAAGAAGTAATAAATGGAATCCTCATTCGTGAGGTGGAAACAAAGAACATCATGACTAAGTCTAGTCTGCCGGTAGG
CGGTTACTCGGTCAATCCCTATGTGGGCTGTACACATGCCTGCAAGTATTGCTATGCTTCTTTTATGAAGCGCTTTACCG
GGCACAAGGAGGAATGGGGCACTTTCCTTGATGTGAAGCATTGGCCGGAAATTAAAAATCCGAAGAAATATGCCGGACAG
CGGGTGGTCATCGGTTCTGTGACAGATGGCTACAATCCACAGGAGGAGCAGTTCGGGAATACCAGAAAACTTCTGGAGCA
GCTGATCGGCAGTGACGCAGATATTCTGATCTGCACAAAGTCGGATCTTGTGGTACGGGATATTGATCTGTTGAAGAAGC
TTGGACGTGTAACCGTTTCATGGTCGATCAACACACTAGATGAAAATTTCAAGAACGATATGGACTCTGCTTCGAGCATT
GAGCGCCGTATCTCTGCTATGAAGCAGGTATATGAATCAGGTATCCGTACAGTCTGTTTCGTATCCCCGGTATTCCCCGG
TATCACGGATTTTGAAGCAATCTTTGAGCGGGTAAAGGATCAGTGCGATCTGTTCTGGCTCGAAAATCTCAATCTTCGAG
GCGGTTTCAAAAAGACAATTATGGATTATATCACCGGACAATATCCTGATCTTGTACCACTTTACGACGAGATCTATAAC
AAGCATAACCGCAGCTACTTTGAAGCACTTGAAGTAAAAGCTGAGAAAATGGCTAAGAAGTATGATTGTGCCTTTGTGGA
TAATGAAATGCCTTATGGCAGAGTCCCGCAGGGGCATCCGGTGATCGTAGATTATTTTTATCATGAGGAAATCCGTGGGA
CAGAGAATACCGGAAAAAGAAATCGCTAA

Upstream 100 bases:

>100_bases
CGGTGTTTATGAAGGAAGACATTGTCCCTATCATAGGGGATGAAAATATGATTCAGGAAATGCCGGAAGAATTTAATAAA
GTGTTAGAGGTACAGAAATC

Downstream 100 bases:

>100_bases
CTTCAAGTTTGCAGAACTAATAGAGAAGTAACATATAAAACAATAAATATGGTCAAAAAATCATCGACATCCACCCAAAA
TTAAAAATTTCCACCCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEEVINGILIREVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMKRFTGHKEEWGTFLDVKHWPEIKNPKKYAGQ
RVVIGSVTDGYNPQEEQFGNTRKLLEQLIGSDADILICTKSDLVVRDIDLLKKLGRVTVSWSINTLDENFKNDMDSASSI
ERRISAMKQVYESGIRTVCFVSPVFPGITDFEAIFERVKDQCDLFWLENLNLRGGFKKTIMDYITGQYPDLVPLYDEIYN
KHNRSYFEALEVKAEKMAKKYDCAFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKRNR

Sequences:

>Translated_302_residues
MEEVINGILIREVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMKRFTGHKEEWGTFLDVKHWPEIKNPKKYAGQ
RVVIGSVTDGYNPQEEQFGNTRKLLEQLIGSDADILICTKSDLVVRDIDLLKKLGRVTVSWSINTLDENFKNDMDSASSI
ERRISAMKQVYESGIRTVCFVSPVFPGITDFEAIFERVKDQCDLFWLENLNLRGGFKKTIMDYITGQYPDLVPLYDEIYN
KHNRSYFEALEVKAEKMAKKYDCAFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKRNR
>Mature_302_residues
MEEVINGILIREVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMKRFTGHKEEWGTFLDVKHWPEIKNPKKYAGQ
RVVIGSVTDGYNPQEEQFGNTRKLLEQLIGSDADILICTKSDLVVRDIDLLKKLGRVTVSWSINTLDENFKNDMDSASSI
ERRISAMKQVYESGIRTVCFVSPVFPGITDFEAIFERVKDQCDLFWLENLNLRGGFKKTIMDYITGQYPDLVPLYDEIYN
KHNRSYFEALEVKAEKMAKKYDCAFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKRNR

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 34802; Mature: 34802

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEVINGILIREVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMKRFTGHKEEWG
CHHHHCCHHHEEEHHHHCEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCC
TFLDVKHWPEIKNPKKYAGQRVVIGSVTDGYNPQEEQFGNTRKLLEQLIGSDADILICTK
CEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEECC
SDLVVRDIDLLKKLGRVTVSWSINTLDENFKNDMDSASSIERRISAMKQVYESGIRTVCF
CCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEE
VSPVFPGITDFEAIFERVKDQCDLFWLENLNLRGGFKKTIMDYITGQYPDLVPLYDEIYN
ECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
KHNRSYFEALEVKAEKMAKKYDCAFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKR
HCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCC
NR
CC
>Mature Secondary Structure
MEEVINGILIREVETKNIMTKSSLPVGGYSVNPYVGCTHACKYCYASFMKRFTGHKEEWG
CHHHHCCHHHEEEHHHHCEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCC
TFLDVKHWPEIKNPKKYAGQRVVIGSVTDGYNPQEEQFGNTRKLLEQLIGSDADILICTK
CEECCCCCCCCCCCHHHCCCEEEEEECCCCCCCCHHHCCCHHHHHHHHHCCCCCEEEECC
SDLVVRDIDLLKKLGRVTVSWSINTLDENFKNDMDSASSIERRISAMKQVYESGIRTVCF
CCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEE
VSPVFPGITDFEAIFERVKDQCDLFWLENLNLRGGFKKTIMDYITGQYPDLVPLYDEIYN
ECCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
KHNRSYFEALEVKAEKMAKKYDCAFVDNEMPYGRVPQGHPVIVDYFYHEEIRGTENTGKR
HCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCC
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]