| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925816
Identifier: 238925816
GI number: 238925816
Start: 3257606
End: 3258547
Strand: Reverse
Name: 238925816
Synonym: EUBREC_3474
Alternate gene names: NA
Gene position: 3258547-3257606 (Counterclockwise)
Preceding gene: 238925818
Following gene: 238925813
Centisome position: 94.46
GC content: 35.46
Gene sequence:
>942_bases ATGAGAAATATGCTTACAAGCGTATTCGGGATTTCTATAAAATATGAAGCATGGAATCATCAGGATTCTTTGCCTGTTTA TATTGCAGGGAGTTATGATTTTCATACAGCATATATTGGAAACAGACGCTGTATAATGCTTGCTCCAACAGAAGAACTTG CCACACTTCCGGCATTGAAAAAACAAATTGTAAAAATACAGCAGATTGATAATGTGCCAGTCGTATTTGAACTTACAACG GTATCAAATTATCGAAGAAAAAGTCTTATAGAAAATAATATACCGTTTATTACTGATAAGCAGGTCTTTCTTCCTTTCAT TGGGACAATGCTTTCTGATGAAAAAGAACCCCAAAAGCTGACTGGTAAGTTTGTTTACTCCACGCAGCAGTTGTTTTTAT TTTATCTGTACAGTAAGAAAAAACGATTGTATACTTCAGAAGCCGGAAAAGTGCTTCCGTTTACAGCAATGACCTTGACC AGAGCAGTGAAGCAGTTGGAAACGACAGATTTGTTTCTTGTAGCAAAAGACGGTGTTAATAAGTTTATTGAGTCAAAATA TAAGCGAGATGAATTATTTGAAAAAGCAAAAGTATATTTGACGACTCCTGTTCGAAAAACAGGATATATAGATAAGACGC AAGTTACAGAAAATATGGTCTTTGCAGGGGAAACGGCACTTTCTGAAAAAACAATGCTAAATCCAAGCCGAGTTGTTACC TATGCAATTAGTGAGAAAGATTATGATAAAGCCTTGCTGACTGATGAATTGATAGACCCGGATAAACAGGTCAGACTTGA ATTATGGGCATACAACCCAAAACAATTTTCAGAGGATAACAGTGCTGATGATATTTCACTTGTTTTATCTTTTACAGATA CAAATGATGAAAGAATTGAAGAAGCAGTAGATGAATTGCAGGAAAGAAGGTTGCATGAGTAA
Upstream 100 bases:
>100_bases AGCAGGTCACGGAAAAAGGAAATATAAATTCAAAATAACTCAAAAACTTAACTTATAACATTGACTAAGTTAAAATAAAA CAAATTGAGTTAAAAGGAGA
Downstream 100 bases:
>100_bases TGGTCAGTGGATTTAAAGTCCTTGGGTATAAGGGGAACAGATAAGAATAAAATGACAGAAATGCTATACCAGTGTTATGG GTTGAAGGATAATACATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKALLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFTDTNDERIEEAVDELQERRLHE
Sequences:
>Translated_313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKALLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFTDTNDERIEEAVDELQERRLHE >Mature_313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKALLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFTDTNDERIEEAVDELQERRLHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36160; Mature: 36160
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALK CCCHHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHH KQIVKIQQIDNVPVVFELTTVSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKL HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHH TGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLTRAVKQLETTDLFLVAKDGVN CCCCEEEHHHHHHHEEHHCCHHEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCHHH KFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT HHHHHHHHHHHHHHHCEEEEECCCHHCCCCCHHHHHCCEEEECCHHHCHHHCCCCCCEEE YAISEKDYDKALLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFTDTNDERIE EEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEEECCCHHHHH EAVDELQERRLHE HHHHHHHHHHCCC >Mature Secondary Structure MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALK CCCHHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHH KQIVKIQQIDNVPVVFELTTVSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKL HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHH TGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLTRAVKQLETTDLFLVAKDGVN CCCCEEEHHHHHHHEEHHCCHHEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCHHH KFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT HHHHHHHHHHHHHHHCEEEEECCCHHCCCCCHHHHHCCEEEECCHHHCHHHCCCCCCEEE YAISEKDYDKALLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFTDTNDERIE EEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEEECCCHHHHH EAVDELQERRLHE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA