| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925797
Identifier: 238925797
GI number: 238925797
Start: 3245989
End: 3246930
Strand: Reverse
Name: 238925797
Synonym: EUBREC_3455
Alternate gene names: NA
Gene position: 3246930-3245989 (Counterclockwise)
Preceding gene: 238925798
Following gene: 238925796
Centisome position: 94.12
GC content: 35.35
Gene sequence:
>942_bases ATGAGAAATATGCTTACAAGCGTATTCGGGATTTCTATAAAATATGAAGCATGGAATCATCAGGATTCTTTGCCTGTTTA TATTGCAGGGAGTTATGATTTTCATACAGCATATATTGGAAACAGACGCTGTATAATGCTTGCTCCAACAGAAGAACTTG CCACACTTCCGGCATTGAAAAAACAAATTGTAAAAATACAGCAGATTGATAATGTGCCAGTCGTATTTGAACTTACAACG GTATCAAATTATCGAAGAAAAAGCCTTATAGAAAATAATATACCGTTTATTACTGATAAGCAGGTCTTTCTTCCTTTCAT TGGGACAATGCTTTCTGATGAAAAAGAACCCCAAAAGCTGACTGGTAAGTTTGTTTACTCCACGCAGCAGTTGTTTTTAT TTTATCTGTACAGTAAGAAAAAACGATTGTATACTTCAGAAGCCGGAAAAGTGCTTCCGTTTACAGCAATGACCTTGACC AGAGCAGTGAAGCAGTTGGAAACGACAGATTTGTTTCTTGTAGCAAAAGACGGTGTTAATAAGTTTATTGAGTCAAAATA TAAGCGAGATGAATTATTTGAAAAAGCAAAAGTATATTTGACGACTCCTGTTCGAAAAACAGGATATATAGATAAGACGC AAGTTACAGAAAATATGGTCTTTGCAGGGGAAACGGCACTTTCTGAAAAAACAATGCTAAATCCAAGCCGAGTTGTTACC TATGCAATTAGTGAGAAAGATTATGATAAATCCTTGCTGACTGATGAATTGATAGACCCGGATAAACAGGTCAGACTTGA ATTATGGGCATACAACCCAAAACAATTTTCAGAGGATAACAGTGCTGATGATATTTCACTTGTTTTATCTTTTAAAGATA CAAATGATGAAAGAATTGAAGAAGCAGTAGATGAATTGCAGGAAAGAAGGTTGCATGAGTAA
Upstream 100 bases:
>100_bases AGCAGGTCACGGAAAAAGGAAATATAAATTCAAAATAACTCAAAAACTTGACTTATAACATTGACTAAGTTAAAATAAAA CAAATTGAGTTAAAAGGAGA
Downstream 100 bases:
>100_bases TGGTCAGTGGATTTACAAAATTTAAGGAAAGATTTCAAGGTTTTGAAAATCAATATGTCATCATCGGTGGGACAGCGTGT GATTTGATTATGGAAAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKSLLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFKDTNDERIEEAVDELQERRLHE
Sequences:
>Translated_313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKSLLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFKDTNDERIEEAVDELQERRLHE >Mature_313_residues MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALKKQIVKIQQIDNVPVVFELTT VSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKLTGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLT RAVKQLETTDLFLVAKDGVNKFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT YAISEKDYDKSLLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFKDTNDERIEEAVDELQERRLHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36203; Mature: 36203
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALK CCCHHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHH KQIVKIQQIDNVPVVFELTTVSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKL HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHH TGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLTRAVKQLETTDLFLVAKDGVN CCHHEEEHHHHHHHEEHHCCHHEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCHHH KFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT HHHHHHHHHHHHHHHCEEEEECCCHHCCCCCHHHHHCCEEEECCHHHCHHHCCCCCCEEE YAISEKDYDKSLLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFKDTNDERIE EEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEECCCCHHHHH EAVDELQERRLHE HHHHHHHHHHCCC >Mature Secondary Structure MRNMLTSVFGISIKYEAWNHQDSLPVYIAGSYDFHTAYIGNRRCIMLAPTEELATLPALK CCCHHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECCCEEEEEECHHHHHHHHHHH KQIVKIQQIDNVPVVFELTTVSNYRRKSLIENNIPFITDKQVFLPFIGTMLSDEKEPQKL HHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCHHH TGKFVYSTQQLFLFYLYSKKKRLYTSEAGKVLPFTAMTLTRAVKQLETTDLFLVAKDGVN CCHHEEEHHHHHHHEEHHCCHHEECCCCCCEEEHHHHHHHHHHHHHCCCEEEEEECCHHH KFIESKYKRDELFEKAKVYLTTPVRKTGYIDKTQVTENMVFAGETALSEKTMLNPSRVVT HHHHHHHHHHHHHHHCEEEEECCCHHCCCCCHHHHHCCEEEECCHHHCHHHCCCCCCEEE YAISEKDYDKSLLTDELIDPDKQVRLELWAYNPKQFSEDNSADDISLVLSFKDTNDERIE EEECCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCCCCCEEEEEEECCCCHHHHH EAVDELQERRLHE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA