| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925784
Identifier: 238925784
GI number: 238925784
Start: 3239643
End: 3240683
Strand: Reverse
Name: 238925784
Synonym: EUBREC_3442
Alternate gene names: NA
Gene position: 3240683-3239643 (Counterclockwise)
Preceding gene: 238925785
Following gene: 238925783
Centisome position: 93.94
GC content: 41.11
Gene sequence:
>1041_bases ATGGATATGAACGAAGAATATGGGCTAACTCCTTATGAAACAAGGGAAATCCTGTTTTATAAAACCGATAATGGTGAAGT TCGGGTTGAAATCCTTTTATATCAGGAAAACTTGTGGCTGACGCAGGCAAAGATGGCAGAATTATTTGAAGTGCAAAAGG CGGCTATTTCAAAACATTTGAAAAATATTTTTACATCCGGCGAATTGCAGGAAGAAGCAGTTGTTTCCAAAATGGAAACA ACTGCGGCAGACGGCAAGCGGTACAATACAAGCTATTACAATCTGGATGCCATTATTGCTGTCGGATACCGTGTTAATTC TAAAAAGGCTACGATGTTCCGCATTTGGGCAAATCGAGTATTAAAAGAATTTATTATTAAAGGCTATGTGATGGACGATG CACGACTGCGAGAACCAGAAAACCTTTTTGGTAAGGACTATTTTGAGGAACAGTTGGAGCGTATTCGTGATATTCGCTCC AGCGAGCGCCGTTTTTATCAAAAAATCACGGACATTTACTCCCAGTGCAGTGCTGACTATGATGTGAACAGTCCTGTTAC AAAAGAGTTTTTTGCCACAGTACAGAATAAGCTTCATTACGCTGTCACTCATCATACGGCGGCTGAGATTGTTTATGGAC GAGCCGATAGCACAAAACCAAACATGGGCTTGACAACTTGGAAAAATGCTCCGCAAGGGCGTATTCGCAAGTCGGATGTT TCAATCGCCAAAAACTACTTGAACGAAGAAGAAATGATAAATCTGAATGAGATCGTGACAATGTATCTGGACTATGCCGA AAGACAGGCACGGCGGGGAAATATCATGTATATGCAGGATTGGGTTAATCGTTTGGATGCGTTCCTCCAGTTCAACGAAG AAGATATTTTACATGACAAAGGCAAAGTGACCGCTGCCATCGCAAAGGCGTTTGCAGAAAGTGAATTTGAAAAATTCCGT GTTTTGCAGGACAGAACATATCAGAGTGATTTCGACCGTCTTGTGGCAAATATCGAAGAAAACAGCAAACAAACAAAATA A
Upstream 100 bases:
>100_bases TGGGTGCAAAAAAAGTAATAAAAGCAAGTGATATTTATTATTTTGAAAGAAACTCAAATGGCTCGTTAATTATAGTATGT TCTGATAGGAAAGGAAGGGA
Downstream 100 bases:
>100_bases ATCAGGAAACGATGTTTTCATAAAATTCAGCTCCTTTTGTATTGATTTCCAGCGGTTATAAGGCTTTTTGAGTCCTTTCT TACAACTGCTTTTCAATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MDMNEEYGLTPYETREILFYKTDNGEVRVEILLYQENLWLTQAKMAELFEVQKAAISKHLKNIFTSGELQEEAVVSKMET TAADGKRYNTSYYNLDAIIAVGYRVNSKKATMFRIWANRVLKEFIIKGYVMDDARLREPENLFGKDYFEEQLERIRDIRS SERRFYQKITDIYSQCSADYDVNSPVTKEFFATVQNKLHYAVTHHTAAEIVYGRADSTKPNMGLTTWKNAPQGRIRKSDV SIAKNYLNEEEMINLNEIVTMYLDYAERQARRGNIMYMQDWVNRLDAFLQFNEEDILHDKGKVTAAIAKAFAESEFEKFR VLQDRTYQSDFDRLVANIEENSKQTK
Sequences:
>Translated_346_residues MDMNEEYGLTPYETREILFYKTDNGEVRVEILLYQENLWLTQAKMAELFEVQKAAISKHLKNIFTSGELQEEAVVSKMET TAADGKRYNTSYYNLDAIIAVGYRVNSKKATMFRIWANRVLKEFIIKGYVMDDARLREPENLFGKDYFEEQLERIRDIRS SERRFYQKITDIYSQCSADYDVNSPVTKEFFATVQNKLHYAVTHHTAAEIVYGRADSTKPNMGLTTWKNAPQGRIRKSDV SIAKNYLNEEEMINLNEIVTMYLDYAERQARRGNIMYMQDWVNRLDAFLQFNEEDILHDKGKVTAAIAKAFAESEFEKFR VLQDRTYQSDFDRLVANIEENSKQTK >Mature_346_residues MDMNEEYGLTPYETREILFYKTDNGEVRVEILLYQENLWLTQAKMAELFEVQKAAISKHLKNIFTSGELQEEAVVSKMET TAADGKRYNTSYYNLDAIIAVGYRVNSKKATMFRIWANRVLKEFIIKGYVMDDARLREPENLFGKDYFEEQLERIRDIRS SERRFYQKITDIYSQCSADYDVNSPVTKEFFATVQNKLHYAVTHHTAAEIVYGRADSTKPNMGLTTWKNAPQGRIRKSDV SIAKNYLNEEEMINLNEIVTMYLDYAERQARRGNIMYMQDWVNRLDAFLQFNEEDILHDKGKVTAAIAKAFAESEFEKFR VLQDRTYQSDFDRLVANIEENSKQTK
Specific function: Unknown
COG id: COG3943
COG function: function code R; Virulence protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40585; Mature: 40585
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMNEEYGLTPYETREILFYKTDNGEVRVEILLYQENLWLTQAKMAELFEVQKAAISKHL CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KNIFTSGELQEEAVVSKMETTAADGKRYNTSYYNLDAIIAVGYRVNSKKATMFRIWANRV HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEEECCCCHHHHHHHHHHH LKEFIIKGYVMDDARLREPENLFGKDYFEEQLERIRDIRSSERRFYQKITDIYSQCSADY HHHHHHHCEEECCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVNSPVTKEFFATVQNKLHYAVTHHTAAEIVYGRADSTKPNMGLTTWKNAPQGRIRKSDV CCCCCHHHHHHHHHHHHHHHEEEHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH SIAKNYLNEEEMINLNEIVTMYLDYAERQARRGNIMYMQDWVNRLDAFLQFNEEDILHDK HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHCCC GKVTAAIAKAFAESEFEKFRVLQDRTYQSDFDRLVANIEENSKQTK CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDMNEEYGLTPYETREILFYKTDNGEVRVEILLYQENLWLTQAKMAELFEVQKAAISKHL CCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KNIFTSGELQEEAVVSKMETTAADGKRYNTSYYNLDAIIAVGYRVNSKKATMFRIWANRV HHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCEEEEEEEEEECCCCHHHHHHHHHHH LKEFIIKGYVMDDARLREPENLFGKDYFEEQLERIRDIRSSERRFYQKITDIYSQCSADY HHHHHHHCEEECCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DVNSPVTKEFFATVQNKLHYAVTHHTAAEIVYGRADSTKPNMGLTTWKNAPQGRIRKSDV CCCCCHHHHHHHHHHHHHHHEEEHHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH SIAKNYLNEEEMINLNEIVTMYLDYAERQARRGNIMYMQDWVNRLDAFLQFNEEDILHDK HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHCCC GKVTAAIAKAFAESEFEKFRVLQDRTYQSDFDRLVANIEENSKQTK CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA