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The map label for this gene is mcp4 [H]

Identifier: 238925769

GI number: 238925769

Start: 3225799

End: 3227832

Strand: Reverse

Name: mcp4 [H]

Synonym: EUBREC_3426

Alternate gene names: 238925769

Gene position: 3227832-3225799 (Counterclockwise)

Preceding gene: 238925770

Following gene: 238925768

Centisome position: 93.57

GC content: 41.89

Gene sequence:

>2034_bases
ATGCAAGGGAGATGGAAAAATCAGAGTGATTTTTTTCGTAGGAAGATTAATATCGCTTATTTTTATATTTTATTTGCAAA
GTCATATTCTCTCAGCAAAGTTTATGGATTTGAGAGAGATAAAACGTATAAAAGGTGGATCGCTATTGACGAAAATATAG
TAAAAGTGTATACTGATTTTATAACATGCTTTGTATTTTTGGGTAAAATATACAAAAGTGATCAGTTCCAAGGAAGGGAG
AATAAAAATATGAAGAATATGAAGGTAAGAACCAAGCTAAATCTGATACTGGTTCTGGTTATTTTACTTGTGGCTCTTGG
GAGTGTTGTTTCCTTCAAGGATTTGGAAGATGTGAAAGATAAAGCATTGGAGACAATGGATGCATCATCCCGTCAGAGTT
ATGATGATTCAATTAAAGAGCAGGTGGGCGTGGTTATTTCCCTGTTGTCGGAGATTAATGACGCATATAAAGCGGGAACT
TATACGCTGGATGAAGCCAAGAAAATTGCAGCGGATGAGGTTCGGCAGATGCGTTACGGAGAGACAGGTTACTTTTGGAT
TGATCAGTCAGATGGAACAAATGTAGTTCTGCTTGGCAGCGATACCGAGGGAACGAACCGTATGGAGACAGAGGATGCAA
ACGGATACAAGATGGTGAAAGAAATCATACGTGTAGCAGTGGAAGATGGTGGAGGATACACAGATTATGTATTTCCTAAA
GAAGGAGAGACTAAACCTTCACCGAAGCGTTCCTACAGTGAGTATTTTGAACCATTTGACTGGGTGGTCGGTACAGGAAA
TTATACCGATTATATTGATACTGCCATTGAAAAGCAGGACAAGGTATTTTCCAGCTATGCAATGAAAAAGGCAATCACAC
TGATTGGGGCATGTGTTGCAATGCTTGTGGTTGTTGCAGTGCTTGTTTTCATGATCGCACAGGATATTACAAAGTCACTA
AAGAAAGTTGTAGCAGAGATTGAAGTGATTGCAGGTGGTAATTTTGCGCATAGAATGCAGGACAATATGATGAAACGGAA
AGATGATTTCGGACAGCTGGCAGGAACACTTGAGACAATGAGGGAATCAATATGCGGATTGCTTTCCCAGGTAAAGATAG
AGGCAGCAAATATTGATACAGTTGTGGAAGCGATGGATAGCAGTATATCAAATCTGAATGGGGAAATTGAGGATGTGTCT
GCGACAACCGAGCAGCTTGCTGCAAGTACTGAAGAAACTGCCGCATCGACAGAACAGATCAACAGTATGACTCAGCAGAT
TGATGGTGCAGCGAAAGAGATTGCGATACGTGCACAGGATGGGGCTACGGAAGCAGAAGAAATTCATAAGAGGGCAGCAC
AGACGAAGGAAGCAACGGTGGAGAATCGACAGAAAGTTCAGACGATGCTCGGAGAAATCAGGGGAAGGCTGGAGCAGGCA
CTTGAAGAGGCAAAGGTTGTGGAACAGATCGGCGTGCTTGCTGATTCTATCCTTGCGATTACCGGACAGACTAATCTGCT
TGCACTGAATGCATCCATTGAGGCAGCACGTGCTGGCGAGGCCGGAAAGGGATTTGCAGTTGTTGCAGAGGAAATCCGGG
TATTGGCAGAGCAGTCTAAAGATGCCGTGGCAAATATTCAGGCCGTGACGGAAAATGTGGATAATGCAGTAGCAAATCTT
GCAAATGACTCTAATCATCTGTTGGATTTTGTAGATACAGATATTGTGAAGAGTTTTGGCGATTTTGAGAAAATGGCAGA
TGATTATAATATGGATGCATCTAAAATTAATGATCTGGTATCGGATTTTAGTGCAACCTCAGAAGAATTGGTAGCATCAA
TTTCCAATATTACAGAGGCGATTGAAGGAATTACCTCCGCATCAAATGACAGTGCTGCAGGTACAACAAATATTGCGCAA
AAAACCGTTTCTATTGCAGGCGAATCGGCAGAAGTCATGAAAGGTGTTAAGACAGCAGAGGCTTCGGCAGGAGAACTCCG
CAAGAATGTAAGCAACTTTGTAATTGAAGAATAA

Upstream 100 bases:

>100_bases
CAGAATGAAGAATTTTAATATTTAAGAGTTTGTTTTATAGGCAATGTTAGCAGATATGAGCTGATTTACAAATATTACTG
CAAATATTGCTCAAGGCAGC

Downstream 100 bases:

>100_bases
GAAATATATTTACAAGAGGAATTCGTATCAGGTTCACTTGCCTGCAAGCATGCATCGATGATACCTTTTGCCCCTTTAAT
CATATTATTACACGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 677; Mature: 677

Protein sequence:

>677_residues
MQGRWKNQSDFFRRKINIAYFYILFAKSYSLSKVYGFERDKTYKRWIAIDENIVKVYTDFITCFVFLGKIYKSDQFQGRE
NKNMKNMKVRTKLNLILVLVILLVALGSVVSFKDLEDVKDKALETMDASSRQSYDDSIKEQVGVVISLLSEINDAYKAGT
YTLDEAKKIAADEVRQMRYGETGYFWIDQSDGTNVVLLGSDTEGTNRMETEDANGYKMVKEIIRVAVEDGGGYTDYVFPK
EGETKPSPKRSYSEYFEPFDWVVGTGNYTDYIDTAIEKQDKVFSSYAMKKAITLIGACVAMLVVVAVLVFMIAQDITKSL
KKVVAEIEVIAGGNFAHRMQDNMMKRKDDFGQLAGTLETMRESICGLLSQVKIEAANIDTVVEAMDSSISNLNGEIEDVS
ATTEQLAASTEETAASTEQINSMTQQIDGAAKEIAIRAQDGATEAEEIHKRAAQTKEATVENRQKVQTMLGEIRGRLEQA
LEEAKVVEQIGVLADSILAITGQTNLLALNASIEAARAGEAGKGFAVVAEEIRVLAEQSKDAVANIQAVTENVDNAVANL
ANDSNHLLDFVDTDIVKSFGDFEKMADDYNMDASKINDLVSDFSATSEELVASISNITEAIEGITSASNDSAAGTTNIAQ
KTVSIAGESAEVMKGVKTAEASAGELRKNVSNFVIEE

Sequences:

>Translated_677_residues
MQGRWKNQSDFFRRKINIAYFYILFAKSYSLSKVYGFERDKTYKRWIAIDENIVKVYTDFITCFVFLGKIYKSDQFQGRE
NKNMKNMKVRTKLNLILVLVILLVALGSVVSFKDLEDVKDKALETMDASSRQSYDDSIKEQVGVVISLLSEINDAYKAGT
YTLDEAKKIAADEVRQMRYGETGYFWIDQSDGTNVVLLGSDTEGTNRMETEDANGYKMVKEIIRVAVEDGGGYTDYVFPK
EGETKPSPKRSYSEYFEPFDWVVGTGNYTDYIDTAIEKQDKVFSSYAMKKAITLIGACVAMLVVVAVLVFMIAQDITKSL
KKVVAEIEVIAGGNFAHRMQDNMMKRKDDFGQLAGTLETMRESICGLLSQVKIEAANIDTVVEAMDSSISNLNGEIEDVS
ATTEQLAASTEETAASTEQINSMTQQIDGAAKEIAIRAQDGATEAEEIHKRAAQTKEATVENRQKVQTMLGEIRGRLEQA
LEEAKVVEQIGVLADSILAITGQTNLLALNASIEAARAGEAGKGFAVVAEEIRVLAEQSKDAVANIQAVTENVDNAVANL
ANDSNHLLDFVDTDIVKSFGDFEKMADDYNMDASKINDLVSDFSATSEELVASISNITEAIEGITSASNDSAAGTTNIAQ
KTVSIAGESAEVMKGVKTAEASAGELRKNVSNFVIEE
>Mature_677_residues
MQGRWKNQSDFFRRKINIAYFYILFAKSYSLSKVYGFERDKTYKRWIAIDENIVKVYTDFITCFVFLGKIYKSDQFQGRE
NKNMKNMKVRTKLNLILVLVILLVALGSVVSFKDLEDVKDKALETMDASSRQSYDDSIKEQVGVVISLLSEINDAYKAGT
YTLDEAKKIAADEVRQMRYGETGYFWIDQSDGTNVVLLGSDTEGTNRMETEDANGYKMVKEIIRVAVEDGGGYTDYVFPK
EGETKPSPKRSYSEYFEPFDWVVGTGNYTDYIDTAIEKQDKVFSSYAMKKAITLIGACVAMLVVVAVLVFMIAQDITKSL
KKVVAEIEVIAGGNFAHRMQDNMMKRKDDFGQLAGTLETMRESICGLLSQVKIEAANIDTVVEAMDSSISNLNGEIEDVS
ATTEQLAASTEETAASTEQINSMTQQIDGAAKEIAIRAQDGATEAEEIHKRAAQTKEATVENRQKVQTMLGEIRGRLEQA
LEEAKVVEQIGVLADSILAITGQTNLLALNASIEAARAGEAGKGFAVVAEEIRVLAEQSKDAVANIQAVTENVDNAVANL
ANDSNHLLDFVDTDIVKSFGDFEKMADDYNMDASKINDLVSDFSATSEELVASISNITEAIEGITSASNDSAAGTTNIAQ
KTVSIAGESAEVMKGVKTAEASAGELRKNVSNFVIEE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=378, Percent_Identity=29.1005291005291, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1787690, Length=415, Percent_Identity=25.7831325301205, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI1788194, Length=330, Percent_Identity=29.0909090909091, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1788195, Length=243, Percent_Identity=33.3333333333333, Blast_Score=95, Evalue=2e-20,
Organism=Escherichia coli, GI1789453, Length=274, Percent_Identity=31.021897810219, Blast_Score=80, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 74380; Mature: 74380

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRWKNQSDFFRRKINIAYFYILFAKSYSLSKVYGFERDKTYKRWIAIDENIVKVYTDF
CCCCCCCHHHHHHHHHHHHHEEEHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHH
ITCFVFLGKIYKSDQFQGRENKNMKNMKVRTKLNLILVLVILLVALGSVVSFKDLEDVKD
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALETMDASSRQSYDDSIKEQVGVVISLLSEINDAYKAGTYTLDEAKKIAADEVRQMRYG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCC
ETGYFWIDQSDGTNVVLLGSDTEGTNRMETEDANGYKMVKEIIRVAVEDGGGYTDYVFPK
CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCC
EGETKPSPKRSYSEYFEPFDWVVGTGNYTDYIDTAIEKQDKVFSSYAMKKAITLIGACVA
CCCCCCCCCCCHHHHCCCHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVVVAVLVFMIAQDITKSLKKVVAEIEVIAGGNFAHRMQDNMMKRKDDFGQLAGTLETM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RESICGLLSQVKIEAANIDTVVEAMDSSISNLNGEIEDVSATTEQLAASTEETAASTEQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSMTQQIDGAAKEIAIRAQDGATEAEEIHKRAAQTKEATVENRQKVQTMLGEIRGRLEQA
HHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAKVVEQIGVLADSILAITGQTNLLALNASIEAARAGEAGKGFAVVAEEIRVLAEQSK
HHHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DAVANIQAVTENVDNAVANLANDSNHLLDFVDTDIVKSFGDFEKMADDYNMDASKINDLV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SDFSATSEELVASISNITEAIEGITSASNDSAAGTTNIAQKTVSIAGESAEVMKGVKTAE
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
ASAGELRKNVSNFVIEE
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQGRWKNQSDFFRRKINIAYFYILFAKSYSLSKVYGFERDKTYKRWIAIDENIVKVYTDF
CCCCCCCHHHHHHHHHHHHHEEEHHHCCCCHHHHHCCCCCCHHHHHHHCCHHHHHHHHHH
ITCFVFLGKIYKSDQFQGRENKNMKNMKVRTKLNLILVLVILLVALGSVVSFKDLEDVKD
HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALETMDASSRQSYDDSIKEQVGVVISLLSEINDAYKAGTYTLDEAKKIAADEVRQMRYG
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCC
ETGYFWIDQSDGTNVVLLGSDTEGTNRMETEDANGYKMVKEIIRVAVEDGGGYTDYVFPK
CCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCC
EGETKPSPKRSYSEYFEPFDWVVGTGNYTDYIDTAIEKQDKVFSSYAMKKAITLIGACVA
CCCCCCCCCCCHHHHCCCHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVVVAVLVFMIAQDITKSLKKVVAEIEVIAGGNFAHRMQDNMMKRKDDFGQLAGTLETM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RESICGLLSQVKIEAANIDTVVEAMDSSISNLNGEIEDVSATTEQLAASTEETAASTEQI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSMTQQIDGAAKEIAIRAQDGATEAEEIHKRAAQTKEATVENRQKVQTMLGEIRGRLEQA
HHHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEEAKVVEQIGVLADSILAITGQTNLLALNASIEAARAGEAGKGFAVVAEEIRVLAEQSK
HHHHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHH
DAVANIQAVTENVDNAVANLANDSNHLLDFVDTDIVKSFGDFEKMADDYNMDASKINDLV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
SDFSATSEELVASISNITEAIEGITSASNDSAAGTTNIAQKTVSIAGESAEVMKGVKTAE
HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHC
ASAGELRKNVSNFVIEE
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]