| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925758
Identifier: 238925758
GI number: 238925758
Start: 3220288
End: 3220581
Strand: Direct
Name: 238925758
Synonym: EUBREC_3415
Alternate gene names: NA
Gene position: 3220288-3220581 (Clockwise)
Preceding gene: 238925757
Following gene: 238925762
Centisome position: 93.35
GC content: 40.48
Gene sequence:
>294_bases TTGCCGATAAAATTGCAAGTCCTTTTTATCGGACACATTATTTTGCATAATGACAATAAGAAAATATCTATAGAACTGAA AGAAGGGATTTTTATGGCGGTTACCAATAATATCAGAGAAATCCGAGAGCAGCGTGGCATTTACCAGGATGACCTTGCCG CTGCTATCGGATACAGCACCAAAACTGTCGGCAGGATAGAACGTGGGGACAGTACTCCATCTGCCGAATTTATGCTGCGA ATATCAATGTACTTTAATATGCTGGTGGAAGATGTCTTCCATGTAGAAGATTGA
Upstream 100 bases:
>100_bases TCAATGAAAAGTATACACCTATCAAGGTTGGAGAAAATGACCGCTTAGACATATTTGGAAAAGTTCTTGGAAAATCTGAT GCTTCTGCTATTACAGGACA
Downstream 100 bases:
>100_bases GTCGGAGGGAGCAATTCGGTAACAAAGCGATTTTATAACAGGCTTATTTCGTGCACCTTTTTTACTTGGGTGACTGCTTT TGTTCCCAGCACTAGCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MPIKLQVLFIGHIILHNDNKKISIELKEGIFMAVTNNIREIREQRGIYQDDLAAAIGYSTKTVGRIERGDSTPSAEFMLR ISMYFNMLVEDVFHVED
Sequences:
>Translated_97_residues MPIKLQVLFIGHIILHNDNKKISIELKEGIFMAVTNNIREIREQRGIYQDDLAAAIGYSTKTVGRIERGDSTPSAEFMLR ISMYFNMLVEDVFHVED >Mature_96_residues PIKLQVLFIGHIILHNDNKKISIELKEGIFMAVTNNIREIREQRGIYQDDLAAAIGYSTKTVGRIERGDSTPSAEFMLRI SMYFNMLVEDVFHVED
Specific function: Unknown
COG id: COG1476
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11157; Mature: 11026
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKLQVLFIGHIILHNDNKKISIELKEGIFMAVTNNIREIREQRGIYQDDLAAAIGYST CCEEEEEEEEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCC KTVGRIERGDSTPSAEFMLRISMYFNMLVEDVFHVED CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PIKLQVLFIGHIILHNDNKKISIELKEGIFMAVTNNIREIREQRGIYQDDLAAAIGYST CEEEEEEEEEEEEEECCCCEEEEEECCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCC KTVGRIERGDSTPSAEFMLRISMYFNMLVEDVFHVED CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA