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The map label for this gene is umuD [C]

Identifier: 238925757

GI number: 238925757

Start: 3219563

End: 3220297

Strand: Direct

Name: umuD [C]

Synonym: EUBREC_3414

Alternate gene names: 238925757

Gene position: 3219563-3220297 (Clockwise)

Preceding gene: 238925744

Following gene: 238925758

Centisome position: 93.33

GC content: 39.18

Gene sequence:

>735_bases
ATGTACTCAATCGGAGAAATCATTTCAACGTATAGAAAAAAGAAAGGCTTGCTCCAGCAGGATCTCGCTGATGAACTGGC
AAAGGAAGGCATCACTATTTCCTATAAAGCCATATCCAACTGGGAGAGAAATCTTGCTGAACCAAGCGTTACCATATTTT
ACAAAGTATGTAGAATCCTTGGTATTACTAACATGTATGAAGCATATTTTGGAGTAAATCCTGCCGATCCTTTTTCATCA
CTTACTGATGAAGGCAGGGAAAAAGCTATGGATTATATCAATCTGCTTCACGCATCCGGAATGTATGAAAAACAGACTGC
TAAGATAATTCCATTCCGAAGCATTGATATTTTTGAAAATGCTGTATCAGCCGGAACTGGTAACTTCCTTGTAGACGGAC
CGAAAGAGACTGTACACATAGATGAATCTATCCTGCCGGAAGACACTACTTTCGGTGTCCGCATTAGTGGTGACAGTATG
GAACCTGAATTCCATGATGGTCAGATTGCATGGGTATTACAACAGGAATCTGTTGCTAATGGAGAAATCGGCATATTCGC
TCTTAACGGAGAAGCCTATATTAAGAAATTACAAAACGATAAAGACGGAATTTTCCTTATCTCACTCAATGAAAAGTATA
CACCTATCAAGGTTGGAGAAAATGACCGCTTAGACATATTTGGAAAAGTTCTTGGAAAATCTGATGCTTCTGCTATTACA
GGACATTGCCGATAA

Upstream 100 bases:

>100_bases
ATATTGGATTTTTAACTTGAATAATTGGCACTATTGCTATATACTATGGAGTGAAAAGAGACATTTGAAATCAACAAAAT
GAAAGAAAAGAGGCGTATGT

Downstream 100 bases:

>100_bases
AATTGCAAGTCCTTTTTATCGGACACATTATTTTGCATAATGACAATAAGAAAATATCTATAGAACTGAAAGAAGGGATT
TTTATGGCGGTTACCAATAA

Product: LexA repressor

Products: NA

Alternate protein names: Transcriptional Regulator; Phage Repressor-Like Protein; Repressor; Phage Repressor; Prophage; Prophage Repressor; Peptidase; Transcriptional Regulator Cro/CI Family; Repressor-Like Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; LexA Repressor; SOS-Response Transcriptional Repressor; Transcriptional Repressor

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MYSIGEIISTYRKKKGLLQQDLADELAKEGITISYKAISNWERNLAEPSVTIFYKVCRILGITNMYEAYFGVNPADPFSS
LTDEGREKAMDYINLLHASGMYEKQTAKIIPFRSIDIFENAVSAGTGNFLVDGPKETVHIDESILPEDTTFGVRISGDSM
EPEFHDGQIAWVLQQESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVLGKSDASAIT
GHCR

Sequences:

>Translated_244_residues
MYSIGEIISTYRKKKGLLQQDLADELAKEGITISYKAISNWERNLAEPSVTIFYKVCRILGITNMYEAYFGVNPADPFSS
LTDEGREKAMDYINLLHASGMYEKQTAKIIPFRSIDIFENAVSAGTGNFLVDGPKETVHIDESILPEDTTFGVRISGDSM
EPEFHDGQIAWVLQQESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVLGKSDASAIT
GHCR
>Mature_244_residues
MYSIGEIISTYRKKKGLLQQDLADELAKEGITISYKAISNWERNLAEPSVTIFYKVCRILGITNMYEAYFGVNPADPFSS
LTDEGREKAMDYINLLHASGMYEKQTAKIIPFRSIDIFENAVSAGTGNFLVDGPKETVHIDESILPEDTTFGVRISGDSM
EPEFHDGQIAWVLQQESVANGEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVLGKSDASAIT
GHCR

Specific function: Involved In Uv Protection And Mutation. Essential For Induced (Or Sos) Mutagenesis. May Modify The DNA Replication Machinery To Allow Bypass Synthesis Across A Damaged Template. [C]

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 27117; Mature: 27117

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSIGEIISTYRKKKGLLQQDLADELAKEGITISYKAISNWERNLAEPSVTIFYKVCRIL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
GITNMYEAYFGVNPADPFSSLTDEGREKAMDYINLLHASGMYEKQTAKIIPFRSIDIFEN
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
AVSAGTGNFLVDGPKETVHIDESILPEDTTFGVRISGDSMEPEFHDGQIAWVLQQESVAN
HHHCCCCCEEEECCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVLGKSDASAIT
CCEEEEEECCHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCCC
GHCR
CCCC
>Mature Secondary Structure
MYSIGEIISTYRKKKGLLQQDLADELAKEGITISYKAISNWERNLAEPSVTIFYKVCRIL
CCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHH
GITNMYEAYFGVNPADPFSSLTDEGREKAMDYINLLHASGMYEKQTAKIIPFRSIDIFEN
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHH
AVSAGTGNFLVDGPKETVHIDESILPEDTTFGVRISGDSMEPEFHDGQIAWVLQQESVAN
HHHCCCCCEEEECCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCC
GEIGIFALNGEAYIKKLQNDKDGIFLISLNEKYTPIKVGENDRLDIFGKVLGKSDASAIT
CCEEEEEECCHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHCCCCCCCCC
GHCR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA