| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925716
Identifier: 238925716
GI number: 238925716
Start: 3186724
End: 3188046
Strand: Direct
Name: 238925716
Synonym: EUBREC_3373
Alternate gene names: NA
Gene position: 3186724-3188046 (Clockwise)
Preceding gene: 238925715
Following gene: 238925721
Centisome position: 92.38
GC content: 42.33
Gene sequence:
>1323_bases TTGATCATAGCCCTGCCGGAATCTTTTACGGAGTATCCTCCAGACAGACTGTTGCAGATATTTACAGACCATTTCAGACA GACTTACGGAACGGACTGTATCGCAGCCCTGCATCACAATAAGCGGAAAACCAACTATCACATCCATCTCATTTTTTCGG AGCGTACACTCTTGGAACAGCCCATAGAAAAGGTTGCCACCCGCAATATGTTCTATGACGAAAAGGGAAATCATGTACGC ACCAAGAAAGAGATACTTGATGAAGAAGGAAATATCCGTAAAAGGTGTAAGGTGATTCACAAAGGTGAGGTATACGAAAG ACAGATTTTCTCCATTAAGGATAAACACTTCAAGGCTGAAAATTTCCTTGATACCGTCAAGCAGGATTATACCAATCTTA TCAATCAGTATGTGTGGGATAAAAGCCAGCGGTTAGAAGTTTTTGAGCGTGGCGGTATGTATCTTGCCACCAAAAAGATT GGTAAGAACAATCCGAAAGCCACCGAGATTGAGGCAGACAACAGTAAACGCACCTTGTGGAATCAGACTGTTGACAGAGC GATTGTAACGGGTGTTTCCAAGTCAGAAATCATGCAGATAAAAAAGGAACGGATAACGGACAAGATTGTGGAATCCGTAT GGCTTTACGGAAACAGACCGAATCTGTTATCTTCCATTATCGGTACTGCCATTGCAGTATTAGAACTGTTAATCTCCAAA GTATTTCTCAAAACTCTGGAGCTTGCAGATAAAGTAATTTCCAAAGAGCTTGAAGCAAGACCGGAGAACACAGATTTCAA AGAGCAGAAAGCTGTACCAGAAGAAAGCAGAAAGCAGACAGATACACCAAAGCCTGCCATACCGCCAAGACCACAGCCAT CACCGGAAGCAGTTTCTTACAAGCACTTATGCGAAATTTATCAAAAGCTGCAAGAACAGAATAAAGCAATTTTTGCACTC GAGAAACAGCGAAGTGACCTTGAAATTGAACTGTCCGACAGCAAAGGTATCTTCAAAGCAAAAAGGCGTTCCGAACTTTC AACAGAGATAGCCGGATTGGAGGAACGTATTTCCCGAATGAAAGCCCGATTATCCCATATCGTAAAGGAATACGGGTATC AGAATGCGGAAGCCTTCTACAAAGCATTTCATAAGTCAGAGACAGCTTATGGGGATTATCAGGACAGCCTTAAGAATTGG AAACAACGGTATGGAGAAAAGCCACAGTCTCTACACGATAGGCTTATATCTAAGAAACAGGACATAAAGGAGCGAGAGTT AACAAGACCATATTCTCCACCAAACCATGGAAGGAGTAGATAA
Upstream 100 bases:
>100_bases TGAAACCACAGACCGTAATTTTTGGACTGACCTTGCAAAATATAATCAGGCAGAATTTTAAAAAAACGGTACGGAGGGGA AATGTATTGAGGCAAGGGAA
Downstream 100 bases:
>100_bases CAAACGAAGGGAGGCAATTGCCTCCCTTCGTTTGTTATCTCTCCGTAAAAGACTGGAATTTCACCCTCTCGCATAAAGAT ACAAATTATTTTTTTATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIIALPESFTEYPPDRLLQIFTDHFRQTYGTDCIAALHHNKRKTNYHIHLIFSERTLLEQPIEKVATRNMFYDEKGNHVR TKKEILDEEGNIRKRCKVIHKGEVYERQIFSIKDKHFKAENFLDTVKQDYTNLINQYVWDKSQRLEVFERGGMYLATKKI GKNNPKATEIEADNSKRTLWNQTVDRAIVTGVSKSEIMQIKKERITDKIVESVWLYGNRPNLLSSIIGTAIAVLELLISK VFLKTLELADKVISKELEARPENTDFKEQKAVPEESRKQTDTPKPAIPPRPQPSPEAVSYKHLCEIYQKLQEQNKAIFAL EKQRSDLEIELSDSKGIFKAKRRSELSTEIAGLEERISRMKARLSHIVKEYGYQNAEAFYKAFHKSETAYGDYQDSLKNW KQRYGEKPQSLHDRLISKKQDIKERELTRPYSPPNHGRSR
Sequences:
>Translated_440_residues MIIALPESFTEYPPDRLLQIFTDHFRQTYGTDCIAALHHNKRKTNYHIHLIFSERTLLEQPIEKVATRNMFYDEKGNHVR TKKEILDEEGNIRKRCKVIHKGEVYERQIFSIKDKHFKAENFLDTVKQDYTNLINQYVWDKSQRLEVFERGGMYLATKKI GKNNPKATEIEADNSKRTLWNQTVDRAIVTGVSKSEIMQIKKERITDKIVESVWLYGNRPNLLSSIIGTAIAVLELLISK VFLKTLELADKVISKELEARPENTDFKEQKAVPEESRKQTDTPKPAIPPRPQPSPEAVSYKHLCEIYQKLQEQNKAIFAL EKQRSDLEIELSDSKGIFKAKRRSELSTEIAGLEERISRMKARLSHIVKEYGYQNAEAFYKAFHKSETAYGDYQDSLKNW KQRYGEKPQSLHDRLISKKQDIKERELTRPYSPPNHGRSR >Mature_440_residues MIIALPESFTEYPPDRLLQIFTDHFRQTYGTDCIAALHHNKRKTNYHIHLIFSERTLLEQPIEKVATRNMFYDEKGNHVR TKKEILDEEGNIRKRCKVIHKGEVYERQIFSIKDKHFKAENFLDTVKQDYTNLINQYVWDKSQRLEVFERGGMYLATKKI GKNNPKATEIEADNSKRTLWNQTVDRAIVTGVSKSEIMQIKKERITDKIVESVWLYGNRPNLLSSIIGTAIAVLELLISK VFLKTLELADKVISKELEARPENTDFKEQKAVPEESRKQTDTPKPAIPPRPQPSPEAVSYKHLCEIYQKLQEQNKAIFAL EKQRSDLEIELSDSKGIFKAKRRSELSTEIAGLEERISRMKARLSHIVKEYGYQNAEAFYKAFHKSETAYGDYQDSLKNW KQRYGEKPQSLHDRLISKKQDIKERELTRPYSPPNHGRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51427; Mature: 51427
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIALPESFTEYPPDRLLQIFTDHFRQTYGTDCIAALHHNKRKTNYHIHLIFSERTLLEQ CEEECCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEEECCHHHHHH PIEKVATRNMFYDEKGNHVRTKKEILDEEGNIRKRCKVIHKGEVYERQIFSIKDKHFKAE HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NFLDTVKQDYTNLINQYVWDKSQRLEVFERGGMYLATKKIGKNNPKATEIEADNSKRTLW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCEEECCCCHHHHH NQTVDRAIVTGVSKSEIMQIKKERITDKIVESVWLYGNRPNLLSSIIGTAIAVLELLISK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VFLKTLELADKVISKELEARPENTDFKEQKAVPEESRKQTDTPKPAIPPRPQPSPEAVSY HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHH KHLCEIYQKLQEQNKAIFALEKQRSDLEIELSDSKGIFKAKRRSELSTEIAGLEERISRM HHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KARLSHIVKEYGYQNAEAFYKAFHKSETAYGDYQDSLKNWKQRYGEKPQSLHDRLISKKQ HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DIKERELTRPYSPPNHGRSR HHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIIALPESFTEYPPDRLLQIFTDHFRQTYGTDCIAALHHNKRKTNYHIHLIFSERTLLEQ CEEECCHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEEEEECCHHHHHH PIEKVATRNMFYDEKGNHVRTKKEILDEEGNIRKRCKVIHKGEVYERQIFSIKDKHFKAE HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NFLDTVKQDYTNLINQYVWDKSQRLEVFERGGMYLATKKIGKNNPKATEIEADNSKRTLW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEHHHCCCCCCCCEEECCCCHHHHH NQTVDRAIVTGVSKSEIMQIKKERITDKIVESVWLYGNRPNLLSSIIGTAIAVLELLISK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VFLKTLELADKVISKELEARPENTDFKEQKAVPEESRKQTDTPKPAIPPRPQPSPEAVSY HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCHHHH KHLCEIYQKLQEQNKAIFALEKQRSDLEIELSDSKGIFKAKRRSELSTEIAGLEERISRM HHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH KARLSHIVKEYGYQNAEAFYKAFHKSETAYGDYQDSLKNWKQRYGEKPQSLHDRLISKKQ HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH DIKERELTRPYSPPNHGRSR HHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA