| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yhcG [H]
Identifier: 238925707
GI number: 238925707
Start: 3179890
End: 3180969
Strand: Reverse
Name: yhcG [H]
Synonym: EUBREC_3364
Alternate gene names: 238925707
Gene position: 3180969-3179890 (Counterclockwise)
Preceding gene: 238925711
Following gene: 238925706
Centisome position: 92.21
GC content: 34.44
Gene sequence:
>1080_bases ATGAGCGAATTGATTAAGGCTGATAATGAATATAAAGAGTGGATTGCCGGAATATCCACTGATTTTAGAAAAAGCCAAAT CAGGGCTTCTATGAAGATAAATGATGAGATGCTGAGATTTTATTGGAAACTTGGTAAGGGCATTTCATCTATGAGCGAAC AGTTCGGGTATGGAACGGGATTCTATAAAACGGTGAGTGACGATTTGAAATCCATTTTGCCAGATGTGAAATCATTTTCT CCAACTAATTTGAAATATATGAGATATTTTTATGAGATGTATCCTGACGCAGTGATTTGTCCTCAGGTTGAGGACGAATT GATTACAGATGCAAATCGTCCCCAAGTTGGGGATAATTTACAAATCATTTTTAGAATTCCATGGGGACATAACAAAATAA TACTTGATAAATGCAAAGGGAATTCTGCAAAGGCATTGTTTTATATCAGAAAGACTATTGAAAACAATTGGTCAAGAGAT GTTTTACTAAACTTCTTAGGAACGGATTTATATGAACGTCAAGGCAAAGCAATAACTAACTTTACTAACACACTTCCGAT AGAACAGAGCGATTTAGCACAAGCAATTACGAAGGATCCATATAATTTTGATTTTTTGACTTTGCGTGAAAGGTATGATG AAAAGGAACTAAAGGATGCACTTATAGAGAAAGTTAATAATTTTCTTATGGAGTTAGGTACTGGCTTTGCTTATATGGGC AGGGAAGTGAGAATTGAGGTAGGAGATACTGAAAAATTTATAGACATGTTATTTTACAATACTCAAAGGCATTGTTATGT TGTTGTAGAAATAAAGACAGGAAAATTTGATTCTTCTTATGCAGGTCAATTGGGAACTTATGTTGTGGCTGTTAATCATC AGATGAAAACAGAAGCTGATAATCCTACTTTGGGACTTCTGATTTGTAAAGATATGGATAAAGTAGAAGCCCAATATGCA TTAGAATCTACTAGCCAGCCACTTGGTATTTCTAGTTATGAGTTATCAAAACTTATACCAGAAGAGTTCAGAGGTAGTAT GCCTACTATTGAAGAAATTGAGGCCGAATTAAATGAATAA
Upstream 100 bases:
>100_bases CGAATGAACTCTTTTTCCTTTTTTATAATAGTATCATTATGGTATAATAGAGACATTAGAATCGGAATTTGTCTAACTGA CACATTAGAAAGGATTGTAT
Downstream 100 bases:
>100_bases TCAATTCATACAAAGAGTAATATTCGATTGGAATAGAATTGATAACGATAGTTATTTAAAGGGAATCGAGGCTTTTAAGG GAATTGAAAAACTTGATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MSELIKADNEYKEWIAGISTDFRKSQIRASMKINDEMLRFYWKLGKGISSMSEQFGYGTGFYKTVSDDLKSILPDVKSFS PTNLKYMRYFYEMYPDAVICPQVEDELITDANRPQVGDNLQIIFRIPWGHNKIILDKCKGNSAKALFYIRKTIENNWSRD VLLNFLGTDLYERQGKAITNFTNTLPIEQSDLAQAITKDPYNFDFLTLRERYDEKELKDALIEKVNNFLMELGTGFAYMG REVRIEVGDTEKFIDMLFYNTQRHCYVVVEIKTGKFDSSYAGQLGTYVVAVNHQMKTEADNPTLGLLICKDMDKVEAQYA LESTSQPLGISSYELSKLIPEEFRGSMPTIEEIEAELNE
Sequences:
>Translated_359_residues MSELIKADNEYKEWIAGISTDFRKSQIRASMKINDEMLRFYWKLGKGISSMSEQFGYGTGFYKTVSDDLKSILPDVKSFS PTNLKYMRYFYEMYPDAVICPQVEDELITDANRPQVGDNLQIIFRIPWGHNKIILDKCKGNSAKALFYIRKTIENNWSRD VLLNFLGTDLYERQGKAITNFTNTLPIEQSDLAQAITKDPYNFDFLTLRERYDEKELKDALIEKVNNFLMELGTGFAYMG REVRIEVGDTEKFIDMLFYNTQRHCYVVVEIKTGKFDSSYAGQLGTYVVAVNHQMKTEADNPTLGLLICKDMDKVEAQYA LESTSQPLGISSYELSKLIPEEFRGSMPTIEEIEAELNE >Mature_358_residues SELIKADNEYKEWIAGISTDFRKSQIRASMKINDEMLRFYWKLGKGISSMSEQFGYGTGFYKTVSDDLKSILPDVKSFSP TNLKYMRYFYEMYPDAVICPQVEDELITDANRPQVGDNLQIIFRIPWGHNKIILDKCKGNSAKALFYIRKTIENNWSRDV LLNFLGTDLYERQGKAITNFTNTLPIEQSDLAQAITKDPYNFDFLTLRERYDEKELKDALIEKVNNFLMELGTGFAYMGR EVRIEVGDTEKFIDMLFYNTQRHCYVVVEIKTGKFDSSYAGQLGTYVVAVNHQMKTEADNPTLGLLICKDMDKVEAQYAL ESTSQPLGISSYELSKLIPEEFRGSMPTIEEIEAELNE
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=330, Percent_Identity=28.7878787878788, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 41371; Mature: 41239
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELIKADNEYKEWIAGISTDFRKSQIRASMKINDEMLRFYWKLGKGISSMSEQFGYGTG CCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCC FYKTVSDDLKSILPDVKSFSPTNLKYMRYFYEMYPDAVICPQVEDELITDANRPQVGDNL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCE QIIFRIPWGHNKIILDKCKGNSAKALFYIRKTIENNWSRDVLLNFLGTDLYERQGKAITN EEEEECCCCCCEEEEEECCCCCCHHHHEEHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHH FTNTLPIEQSDLAQAITKDPYNFDFLTLRERYDEKELKDALIEKVNNFLMELGTGFAYMG HCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCC REVRIEVGDTEKFIDMLFYNTQRHCYVVVEIKTGKFDSSYAGQLGTYVVAVNHQMKTEAD CEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC NPTLGLLICKDMDKVEAQYALESTSQPLGISSYELSKLIPEEFRGSMPTIEEIEAELNE CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHCC >Mature Secondary Structure SELIKADNEYKEWIAGISTDFRKSQIRASMKINDEMLRFYWKLGKGISSMSEQFGYGTG CCHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHCCCCCC FYKTVSDDLKSILPDVKSFSPTNLKYMRYFYEMYPDAVICPQVEDELITDANRPQVGDNL HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHCCCCCCCCCCCE QIIFRIPWGHNKIILDKCKGNSAKALFYIRKTIENNWSRDVLLNFLGTDLYERQGKAITN EEEEECCCCCCEEEEEECCCCCCHHHHEEHHHHHCCCCHHHHHHHHHHHHHHHCCCEEHH FTNTLPIEQSDLAQAITKDPYNFDFLTLRERYDEKELKDALIEKVNNFLMELGTGFAYMG HCCCCCCCHHHHHHHHHCCCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCC REVRIEVGDTEKFIDMLFYNTQRHCYVVVEIKTGKFDSSYAGQLGTYVVAVNHQMKTEAD CEEEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCC NPTLGLLICKDMDKVEAQYALESTSQPLGISSYELSKLIPEEFRGSMPTIEEIEAELNE CCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]