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The map label for this gene is bioY [H]

Identifier: 238925632

GI number: 238925632

Start: 3124263

End: 3124808

Strand: Direct

Name: bioY [H]

Synonym: EUBREC_3289

Alternate gene names: 238925632

Gene position: 3124263-3124808 (Clockwise)

Preceding gene: 238925629

Following gene: 238925643

Centisome position: 90.57

GC content: 45.79

Gene sequence:

>546_bases
ATGAACCAGACAGAAACTATAGACTACAAGCATGGAACGACCTATGCCATAACGGTAACAGCGCTCATGACAGCTGTCAC
ATGTATTCTTGCACCATTATCTATCCCGATTGGGCCGGTACCGATTTCACTGACAAACCTGGCCATATATATTTCATTAT
ATCTGCTCGGATGGAAACGTGGAACTATAAGCTACCTCATTTACCTGCTTATCGGACTTGTCGGAATCCCTGTATTTTCA
GGCTTCACCGGTGGCCCAGCTAAGCTTGCCGGCCCTACAGGCGGATACATCATCGGTTTTATTGCCATGGCAATTATTGC
AGGACTTGTAATCGATCATTTCCACCAGCCTTGGCTCCAGCTCATTGGTATGATTGTCGGAACTATCATATGCTATGTGC
TCGGTACAGCATGGTTCTGCTTTGAGGCAAAAAGCACAGTCAGCGGTGCGCTCTCAATATGTGTGTTCCCATTTATCCCG
GGCGACCTGATAAAAATGATAATTGCCATGCTTATCGGACCGGCTATTAAAAAAAGACTTCGCTAA

Upstream 100 bases:

>100_bases
AAACCTTTATTGCAGTTATGGTTGACAATCGACATCTTTTCATGTTAATGTGTTAACCGTACAAAAATTACTATGAAATT
TACAAAAAGGAGATTTTATC

Downstream 100 bases:

>100_bases
ACATCAACTCCAAGCTTTCTAAGCTCCTGATACAGGCGCGCTACCGGAAGCCCTACCACATTATTGTAATCACCATGTAT
TCCCTTAATGTGGATGGCAA

Product: bioY protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MNQTETIDYKHGTTYAITVTALMTAVTCILAPLSIPIGPVPISLTNLAIYISLYLLGWKRGTISYLIYLLIGLVGIPVFS
GFTGGPAKLAGPTGGYIIGFIAMAIIAGLVIDHFHQPWLQLIGMIVGTIICYVLGTAWFCFEAKSTVSGALSICVFPFIP
GDLIKMIIAMLIGPAIKKRLR

Sequences:

>Translated_181_residues
MNQTETIDYKHGTTYAITVTALMTAVTCILAPLSIPIGPVPISLTNLAIYISLYLLGWKRGTISYLIYLLIGLVGIPVFS
GFTGGPAKLAGPTGGYIIGFIAMAIIAGLVIDHFHQPWLQLIGMIVGTIICYVLGTAWFCFEAKSTVSGALSICVFPFIP
GDLIKMIIAMLIGPAIKKRLR
>Mature_181_residues
MNQTETIDYKHGTTYAITVTALMTAVTCILAPLSIPIGPVPISLTNLAIYISLYLLGWKRGTISYLIYLLIGLVGIPVFS
GFTGGPAKLAGPTGGYIIGFIAMAIIAGLVIDHFHQPWLQLIGMIVGTIICYVLGTAWFCFEAKSTVSGALSICVFPFIP
GDLIKMIIAMLIGPAIKKRLR

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19391; Mature: 19391

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTETIDYKHGTTYAITVTALMTAVTCILAPLSIPIGPVPISLTNLAIYISLYLLGWKR
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GTISYLIYLLIGLVGIPVFSGFTGGPAKLAGPTGGYIIGFIAMAIIAGLVIDHFHQPWLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIGMIVGTIICYVLGTAWFCFEAKSTVSGALSICVFPFIPGDLIKMIIAMLIGPAIKKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHC
R
C
>Mature Secondary Structure
MNQTETIDYKHGTTYAITVTALMTAVTCILAPLSIPIGPVPISLTNLAIYISLYLLGWKR
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
GTISYLIYLLIGLVGIPVFSGFTGGPAKLAGPTGGYIIGFIAMAIIAGLVIDHFHQPWLQ
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIGMIVGTIICYVLGTAWFCFEAKSTVSGALSICVFPFIPGDLIKMIIAMLIGPAIKKRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]