| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925224
Identifier: 238925224
GI number: 238925224
Start: 2754687
End: 2756267
Strand: Direct
Name: 238925224
Synonym: EUBREC_2878
Alternate gene names: NA
Gene position: 2754687-2756267 (Clockwise)
Preceding gene: 238925219
Following gene: 238925255
Centisome position: 79.85
GC content: 36.12
Gene sequence:
>1581_bases ATGGGTATTTATTTTAATCCGGGAAATGGCAGCTTTACAAAAGACAAAAACAGTCAGCTATATATTGACAAAACCGGTCT GATTGAATATTTGAATAGAGTTATCTGTACAAATGCCAACTGCATAAGTGTCAGCCATGCCAGAAGGTTCGGTAAATCCC ATGCTGCTGGAATGATCGATGCATACTACAGCAGAGGCTGCGATTCATCAGAGCTTTTTGCAGATTCTGAAATTGCAGCC AAGGACAGCTATTCAGCACATTTGAATAAATACAATGTCATACACATTGATGTATCATCATTTTGGGATGCTTACAAAGA TAATGTGATAGAAAAAATTCAGGAATATATTTATGACGAGCTTAAACAGGTATATGGCGATCAGATAGATTATACCAAGA TGATCAGTGCTGTACTCATGTCCGTCTACAACATTTCCGATATTCCATTTGTTATAATAATTGATGAATGGGATTGTGTA ATCCGAAATGGTGGAAATAAAACACTGGTTCACAGCTATCTTCAGTTTCTTCATTTGTTATTTAAGAGCGAAGAGTCAAA AACCTTTTTAGCTTTGGCATATATCACCGGTATTCTGCCAATCAAAAAAATTAAAGATGAATCAGCTCTGAACAACTTCC GTGAGTTTACAATGTTGAAATCGAAACAATTGACCAGATATTTTGGTTTTACAGAGGATGAAGTTAAAAAGCTGTGCATC ACATATGATATGGATTTTGAATCAATAAAAGCATGGTATAACGGATATCTGATAGACGGGCTTCATATGTATAACCCTAA TTCCGTTGTTCAGGCTATGCTAGATCATGACTATGATTTTTACTGGAAAAATACATCCTCGTTTGAATCAATCAACACAT TTATCACCATGAACTACGCCGGTTTAAAGGATGATGTGCTCGCCATGCTTTCCGGCGATAAAATCAGAGTTAATGTAAAT ACCTTCCAAAATGACCTTACTACAGTTGCTTCAAAGGATGATGCACTTACAGCTTTAATTCATTTAGGTTATCTGGCTTA TGATGCCAATAGGAAAATGGCATATATACCTAATTATGAAGTTGCTGCTGCATATGATCTTGCATTACAGACCGGTTCAT GGAGTGAAGTAGCCAACTCCATTTCAAAATGTGATGAATTATTAGATGCTACCCTAAATGAAGATGCTGATAAAGTCGCT GAATTGGTAGAAATTGCACATGAAACATATACATCCGTTCTTAAATACAACGACGAAAATTCTTTAAGCTGTGCTCTCAC AATGGCATATTTTACTGCAAATGCATATTACAATATTGTCAGAGAATTTCCAGCCGGCAAAGGTTTTGCTGATCTTGTTT TTATTCCAAGAGCGAATGCCTGTGGCAGACCTGCAATAGTAATTGAACTTAAGTACAATGCTTCCGCTGATTCTGCCATA TCACAGATTAAAAACCGCAGATATCACGGAGCCTTATCAGGATACAGCAATCAGATCTTACTTGTCGGAATTAACTACAG CAACACATCTGATAATAAAAAGCATACATGTATAATTGAAAGTATTAATAACCTCGATTAA
Upstream 100 bases:
>100_bases CACTGTCCGTAGACAGTGCACATAATCTCATGTTGCCCACTTCCATCACTCTTCCAAATCTGTTATACTGATTATATAAA AATGAATTGGAGATGGGACA
Downstream 100 bases:
>100_bases CATAAAGAATAACACAAGCGGACTGACGAAGCAGCCCGCTTGCTTTAGTGTAATAATTATCCTTCAATAGAAATCTATTT CTACTTATGCCTAAATATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MGIYFNPGNGSFTKDKNSQLYIDKTGLIEYLNRVICTNANCISVSHARRFGKSHAAGMIDAYYSRGCDSSELFADSEIAA KDSYSAHLNKYNVIHIDVSSFWDAYKDNVIEKIQEYIYDELKQVYGDQIDYTKMISAVLMSVYNISDIPFVIIIDEWDCV IRNGGNKTLVHSYLQFLHLLFKSEESKTFLALAYITGILPIKKIKDESALNNFREFTMLKSKQLTRYFGFTEDEVKKLCI TYDMDFESIKAWYNGYLIDGLHMYNPNSVVQAMLDHDYDFYWKNTSSFESINTFITMNYAGLKDDVLAMLSGDKIRVNVN TFQNDLTTVASKDDALTALIHLGYLAYDANRKMAYIPNYEVAAAYDLALQTGSWSEVANSISKCDELLDATLNEDADKVA ELVEIAHETYTSVLKYNDENSLSCALTMAYFTANAYYNIVREFPAGKGFADLVFIPRANACGRPAIVIELKYNASADSAI SQIKNRRYHGALSGYSNQILLVGINYSNTSDNKKHTCIIESINNLD
Sequences:
>Translated_526_residues MGIYFNPGNGSFTKDKNSQLYIDKTGLIEYLNRVICTNANCISVSHARRFGKSHAAGMIDAYYSRGCDSSELFADSEIAA KDSYSAHLNKYNVIHIDVSSFWDAYKDNVIEKIQEYIYDELKQVYGDQIDYTKMISAVLMSVYNISDIPFVIIIDEWDCV IRNGGNKTLVHSYLQFLHLLFKSEESKTFLALAYITGILPIKKIKDESALNNFREFTMLKSKQLTRYFGFTEDEVKKLCI TYDMDFESIKAWYNGYLIDGLHMYNPNSVVQAMLDHDYDFYWKNTSSFESINTFITMNYAGLKDDVLAMLSGDKIRVNVN TFQNDLTTVASKDDALTALIHLGYLAYDANRKMAYIPNYEVAAAYDLALQTGSWSEVANSISKCDELLDATLNEDADKVA ELVEIAHETYTSVLKYNDENSLSCALTMAYFTANAYYNIVREFPAGKGFADLVFIPRANACGRPAIVIELKYNASADSAI SQIKNRRYHGALSGYSNQILLVGINYSNTSDNKKHTCIIESINNLD >Mature_525_residues GIYFNPGNGSFTKDKNSQLYIDKTGLIEYLNRVICTNANCISVSHARRFGKSHAAGMIDAYYSRGCDSSELFADSEIAAK DSYSAHLNKYNVIHIDVSSFWDAYKDNVIEKIQEYIYDELKQVYGDQIDYTKMISAVLMSVYNISDIPFVIIIDEWDCVI RNGGNKTLVHSYLQFLHLLFKSEESKTFLALAYITGILPIKKIKDESALNNFREFTMLKSKQLTRYFGFTEDEVKKLCIT YDMDFESIKAWYNGYLIDGLHMYNPNSVVQAMLDHDYDFYWKNTSSFESINTFITMNYAGLKDDVLAMLSGDKIRVNVNT FQNDLTTVASKDDALTALIHLGYLAYDANRKMAYIPNYEVAAAYDLALQTGSWSEVANSISKCDELLDATLNEDADKVAE LVEIAHETYTSVLKYNDENSLSCALTMAYFTANAYYNIVREFPAGKGFADLVFIPRANACGRPAIVIELKYNASADSAIS QIKNRRYHGALSGYSNQILLVGINYSNTSDNKKHTCIIESINNLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59502; Mature: 59370
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYFNPGNGSFTKDKNSQLYIDKTGLIEYLNRVICTNANCISVSHARRFGKSHAAGMID CCEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHCCHHHH AYYSRGCDSSELFADSEIAAKDSYSAHLNKYNVIHIDVSSFWDAYKDNVIEKIQEYIYDE HHHHCCCCCHHHCCCCCCCCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LKQVYGDQIDYTKMISAVLMSVYNISDIPFVIIIDEWDCVIRNGGNKTLVHSYLQFLHLL HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHH FKSEESKTFLALAYITGILPIKKIKDESALNNFREFTMLKSKQLTRYFGFTEDEVKKLCI HCCCCCCCEEEHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE TYDMDFESIKAWYNGYLIDGLHMYNPNSVVQAMLDHDYDFYWKNTSSFESINTFITMNYA EECCCHHHHHHHHCCEEEECEEEECCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEC GLKDDVLAMLSGDKIRVNVNTFQNDLTTVASKDDALTALIHLGYLAYDANRKMAYIPNYE CCCHHHHHHCCCCEEEEEEEHHHCHHHHHCCCCHHHHHHHHHHHHEEECCCCEEECCCCC VAAAYDLALQTGSWSEVANSISKCDELLDATLNEDADKVAELVEIAHETYTSVLKYNDEN CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCC SLSCALTMAYFTANAYYNIVREFPAGKGFADLVFIPRANACGRPAIVIELKYNASADSAI CCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCHHHHH SQIKNRRYHGALSGYSNQILLVGINYSNTSDNKKHTCIIESINNLD HHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure GIYFNPGNGSFTKDKNSQLYIDKTGLIEYLNRVICTNANCISVSHARRFGKSHAAGMID CEEEECCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCEEEHHHHHHCCCHHCCHHHH AYYSRGCDSSELFADSEIAAKDSYSAHLNKYNVIHIDVSSFWDAYKDNVIEKIQEYIYDE HHHHCCCCCHHHCCCCCCCCCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHH LKQVYGDQIDYTKMISAVLMSVYNISDIPFVIIIDEWDCVIRNGGNKTLVHSYLQFLHLL HHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHHHHH FKSEESKTFLALAYITGILPIKKIKDESALNNFREFTMLKSKQLTRYFGFTEDEVKKLCI HCCCCCCCEEEHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE TYDMDFESIKAWYNGYLIDGLHMYNPNSVVQAMLDHDYDFYWKNTSSFESINTFITMNYA EECCCHHHHHHHHCCEEEECEEEECCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEC GLKDDVLAMLSGDKIRVNVNTFQNDLTTVASKDDALTALIHLGYLAYDANRKMAYIPNYE CCCHHHHHHCCCCEEEEEEEHHHCHHHHHCCCCHHHHHHHHHHHHEEECCCCEEECCCCC VAAAYDLALQTGSWSEVANSISKCDELLDATLNEDADKVAELVEIAHETYTSVLKYNDEN CEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCC SLSCALTMAYFTANAYYNIVREFPAGKGFADLVFIPRANACGRPAIVIELKYNASADSAI CCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCHHHHH SQIKNRRYHGALSGYSNQILLVGINYSNTSDNKKHTCIIESINNLD HHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA