| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925219
Identifier: 238925219
GI number: 238925219
Start: 2751641
End: 2752945
Strand: Direct
Name: 238925219
Synonym: EUBREC_2873
Alternate gene names: NA
Gene position: 2751641-2752945 (Clockwise)
Preceding gene: 238925218
Following gene: 238925224
Centisome position: 79.76
GC content: 33.64
Gene sequence:
>1305_bases ATGAGTGCTGCTGTTTGTTATTTTTTAGTATATTTTGCTGAGGCGTTAATACTGTTGCAATATTCATCTAATGTTTTTGA ATACAAAATTTCTTCGATAAAACGATATATATTACTTACAGTACTATTTATCCCAATATATTTTATTTCATTCGCTCATA TCGGTTTATTAAATACTGCTTTATTTTTTGTTGCTACTTATGTTTTTTTAAAAATTTCAACCATGGAAAATAGTGCAACT CTCTTTTTCCATTCTGCCGTTATGATTGTAATTATGACTTTGTGTGAGCTTGCTTCTATGGGAGTTTTCTCAAAGTTTTC ATATCATTTTTATTCTAACATGAATGATACCGTTTTGCTTTATTCAGTTAGTTTTTTAAGCAAATTACTTTACTTTGTAA TCATATATTTCATATCACATAAGCTATCCAGCACCAGATCCAATATACGATTTTCCATCTATGAAATCACTACATTGGCT ATAATACCTGTTATTTCCGTATTTGTAATCTACACAATGATATATTTTCTTATGAATTATGAAATAAAATCTCCACTCAA CTATCTGCTCATCCTTAGCAGCTTTTTCATGCTGCTTATAAACATACTCATCTTTGGTCTGTTTGAACATATTAAGCAAA AAAATTCCGAAATAGCAGAGCTCACACTTCAGAACCAGCGTGATGCCGACTCTGTAGAATACTACAAAGCCCTCGTGTCA CAGGATGAGAAACAAAAAGTTCTCATTCATGACATCAAAAAGCATCTCAATGCCATAGCCTCGCTGAACGAACAGCACGA TTCTGAAAAAATCGCAGCATACCTTACCCACGTACTCGGTTCTTCTGAGTTAAAGCACTCCGTGCGGGTATGCGATAATG ACCTTTTAAACGCACTGCTCTGCCGTTACCAGAAAATATGTCTTACGAAAAAGATTGCGCTGCATATTGATATAAGAAGT AAGTGTATTGATTTCGTGACATATGATGATCTCAGTGTACTTTTCGGTAATCTCATGGATAATGCTGTAGAATCAGCCGA AAAAACAGTTAATCCTTTTATAGAACTCAATGTTTTTCATAAAGAGAACAATAACATGACCATTATCACGCTCATTGATT CCTGCCGCGTAAATCCTATTGATAAAAATGGCAACCTTTTACCAACTAAAAAACCGAATCCACAGTTTCATGGATTCGGT ATGCGTAGTATAGAAAATATTGTTAAGAAGTATAATGGTGAAATGACTTTTTACTTTGATGATCCTACCAAGACATTCCA TACGATTATTATGCTTCGGCACTGA
Upstream 100 bases:
>100_bases ACCTTTGTGATGGTCAGTTCACCGCATATTTAACAAGAAGAAAATTCACCGAATTTAAGAGAGCATATTTGATGTTTATG GAAAGTAAGAGGTAATACTT
Downstream 100 bases:
>100_bases AAGCTGTTTCTTTTAACGATTTTTTATCATCTGGAGCAAATATTCACAGACATCAAAGCTCTTTGCTTCTTGTTCTGTTT CCCGCTTCTTTAATGAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSAAVCYFLVYFAEALILLQYSSNVFEYKISSIKRYILLTVLFIPIYFISFAHIGLLNTALFFVATYVFLKISTMENSAT LFFHSAVMIVIMTLCELASMGVFSKFSYHFYSNMNDTVLLYSVSFLSKLLYFVIIYFISHKLSSTRSNIRFSIYEITTLA IIPVISVFVIYTMIYFLMNYEIKSPLNYLLILSSFFMLLINILIFGLFEHIKQKNSEIAELTLQNQRDADSVEYYKALVS QDEKQKVLIHDIKKHLNAIASLNEQHDSEKIAAYLTHVLGSSELKHSVRVCDNDLLNALLCRYQKICLTKKIALHIDIRS KCIDFVTYDDLSVLFGNLMDNAVESAEKTVNPFIELNVFHKENNNMTIITLIDSCRVNPIDKNGNLLPTKKPNPQFHGFG MRSIENIVKKYNGEMTFYFDDPTKTFHTIIMLRH
Sequences:
>Translated_434_residues MSAAVCYFLVYFAEALILLQYSSNVFEYKISSIKRYILLTVLFIPIYFISFAHIGLLNTALFFVATYVFLKISTMENSAT LFFHSAVMIVIMTLCELASMGVFSKFSYHFYSNMNDTVLLYSVSFLSKLLYFVIIYFISHKLSSTRSNIRFSIYEITTLA IIPVISVFVIYTMIYFLMNYEIKSPLNYLLILSSFFMLLINILIFGLFEHIKQKNSEIAELTLQNQRDADSVEYYKALVS QDEKQKVLIHDIKKHLNAIASLNEQHDSEKIAAYLTHVLGSSELKHSVRVCDNDLLNALLCRYQKICLTKKIALHIDIRS KCIDFVTYDDLSVLFGNLMDNAVESAEKTVNPFIELNVFHKENNNMTIITLIDSCRVNPIDKNGNLLPTKKPNPQFHGFG MRSIENIVKKYNGEMTFYFDDPTKTFHTIIMLRH >Mature_433_residues SAAVCYFLVYFAEALILLQYSSNVFEYKISSIKRYILLTVLFIPIYFISFAHIGLLNTALFFVATYVFLKISTMENSATL FFHSAVMIVIMTLCELASMGVFSKFSYHFYSNMNDTVLLYSVSFLSKLLYFVIIYFISHKLSSTRSNIRFSIYEITTLAI IPVISVFVIYTMIYFLMNYEIKSPLNYLLILSSFFMLLINILIFGLFEHIKQKNSEIAELTLQNQRDADSVEYYKALVSQ DEKQKVLIHDIKKHLNAIASLNEQHDSEKIAAYLTHVLGSSELKHSVRVCDNDLLNALLCRYQKICLTKKIALHIDIRSK CIDFVTYDDLSVLFGNLMDNAVESAEKTVNPFIELNVFHKENNNMTIITLIDSCRVNPIDKNGNLLPTKKPNPQFHGFGM RSIENIVKKYNGEMTFYFDDPTKTFHTIIMLRH
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50122; Mature: 49991
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAVCYFLVYFAEALILLQYSSNVFEYKISSIKRYILLTVLFIPIYFISFAHIGLLNTA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFVATYVFLKISTMENSATLFFHSAVMIVIMTLCELASMGVFSKFSYHFYSNMNDTVLL HHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE YSVSFLSKLLYFVIIYFISHKLSSTRSNIRFSIYEITTLAIIPVISVFVIYTMIYFLMNY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC EIKSPLNYLLILSSFFMLLINILIFGLFEHIKQKNSEIAELTLQNQRDADSVEYYKALVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHC QDEKQKVLIHDIKKHLNAIASLNEQHDSEKIAAYLTHVLGSSELKHSVRVCDNDLLNALL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH CRYQKICLTKKIALHIDIRSKCIDFVTYDDLSVLFGNLMDNAVESAEKTVNPFIELNVFH HHHHHHHHHHHHEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE KENNNMTIITLIDSCRVNPIDKNGNLLPTKKPNPQFHGFGMRSIENIVKKYNGEMTFYFD ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC DPTKTFHTIIMLRH CCCHHEEHEEEEEC >Mature Secondary Structure SAAVCYFLVYFAEALILLQYSSNVFEYKISSIKRYILLTVLFIPIYFISFAHIGLLNTA CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFFVATYVFLKISTMENSATLFFHSAVMIVIMTLCELASMGVFSKFSYHFYSNMNDTVLL HHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEE YSVSFLSKLLYFVIIYFISHKLSSTRSNIRFSIYEITTLAIIPVISVFVIYTMIYFLMNY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC EIKSPLNYLLILSSFFMLLINILIFGLFEHIKQKNSEIAELTLQNQRDADSVEYYKALVS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHC QDEKQKVLIHDIKKHLNAIASLNEQHDSEKIAAYLTHVLGSSELKHSVRVCDNDLLNALL CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH CRYQKICLTKKIALHIDIRSKCIDFVTYDDLSVLFGNLMDNAVESAEKTVNPFIELNVFH HHHHHHHHHHHHEEEEEEHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE KENNNMTIITLIDSCRVNPIDKNGNLLPTKKPNPQFHGFGMRSIENIVKKYNGEMTFYFD ECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEC DPTKTFHTIIMLRH CCCHHEEHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA