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The map label for this gene is yiaN [C]

Identifier: 238925184

GI number: 238925184

Start: 2720353

End: 2721642

Strand: Reverse

Name: yiaN [C]

Synonym: EUBREC_2838

Alternate gene names: 238925184

Gene position: 2721642-2720353 (Counterclockwise)

Preceding gene: 238925185

Following gene: 238925183

Centisome position: 78.9

GC content: 45.04

Gene sequence:

>1290_bases
ATGTCAGCAGCAGTAGTTTTTATATTATTTGTGATATGTCTGGTCATTGCTATTCCGGTATCTATTTCCCTGGGAATAGT
GGCAGTGCTGCCGGGCGCGTTTGACTCATCTTTTACAGCCAGTGCCAGCTATGTTATCCGCTCTATGCTCGGTGGTATAG
ACAGCTTCCCGCTTTTAGCGGTGCCTATGTTTGTGCTTGCGGGAATCGTCATGGCACACGGCAAAATCTCACAAAAATTG
TTTGATGTTTTTGTGTATTTTATAGGAAAAAGAACCGCAGGAATCCCATGTGCGGTTATCATCACCTGCTTGTTCTATGG
AGCGATTTCCGGCTCTGCGCCTGCAACTGTTGCGGCTGTCGGAAGTATGACCATTCCGCTTCTTATGGAGCTGGGCTACA
AAAAGGATTTTTCAACGGCAATTGTTGCGGTTGCGGGAGGACTCGGAGTCATCATACCGCCAAGCATACCTTTTATCATG
TATGCGATGGCAACCGGTGAGTCGGTCAGTGATCTCTTTCTTGCAGGAATCATTCCGGGACTTTTGATAGGGGCGCTTCT
TATGTTTTATGCATATTATCACTGTAAGCGCTATGGAGAGGACAAGGAAAAGATAAATGCAAAGGTCTCTGAGCTTAGAA
GTAAGGGGCTTTTTAGCATATTGAAGGACAGTATATGGGCACTTTTAAGTCCGGTTATAGTACTTGGATGCATTTACGCC
GGTATAGCTTCGCCTACAGAGGCTGCGGTGATTTCAGTATTTTATGCGCTTTTTGTAAGTCTTTTTATTTACAAATCCAT
AAAGGTAAAAGAGATATGGGGCATCATGGTGGAGGCGATGAAGACATACGCACCTATATTGTTTATACTTGCCGCATCGA
CCGCGTTTTCACGCGTGCTCACACTCATGCAGGTGCCACAGACAGTCAGCGCATGGATACTAGCACATTTTGCAAATGAG
ATAGTGCTTCTTATTGTGATAAATGTGTTCCTGCTCATTGTTGGAATGGTTATGGATACCACACCGGCTATACTTATTTT
AAGCCCAATTCTGCTTCCTATCGTGCAGAGCATCGGAATGAACCCGATCCACTTTGGTGTGGTCATGATCGTAAACCTTG
CAATCGGATTTGTTACACCGCCTATAGGAGTAAATCTGTTTGTGGCAAGCTCACTGACGGATGTTCCGGTCATGCGGATA
GCAAAGAAGGCGGCGCCTATGATAGGATATTTCCTGCTGGCACTTCTGCTGCTTACATTTATTCCGGTAATCAGTCTGTG
CTTATTATAG

Upstream 100 bases:

>100_bases
TATAGAGGAAGCCGTTGTCGAAGATACTTACCGCGAGAAAGAGCTTGTGGAGGATATTGAAGCAATTCATAGTAAAGCTG
AAAAGAGAAAGGAGAAATAG

Downstream 100 bases:

>100_bases
AGAAATATTAACTATTCGGTACAGAAATATGTAATAACAGGTATAAGCAGATTTAATGATGATTGTAGGATATTTAGGCA
CACAGTTGTAATTGGAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSAAVVFILFVICLVIAIPVSISLGIVAVLPGAFDSSFTASASYVIRSMLGGIDSFPLLAVPMFVLAGIVMAHGKISQKL
FDVFVYFIGKRTAGIPCAVIITCLFYGAISGSAPATVAAVGSMTIPLLMELGYKKDFSTAIVAVAGGLGVIIPPSIPFIM
YAMATGESVSDLFLAGIIPGLLIGALLMFYAYYHCKRYGEDKEKINAKVSELRSKGLFSILKDSIWALLSPVIVLGCIYA
GIASPTEAAVISVFYALFVSLFIYKSIKVKEIWGIMVEAMKTYAPILFILAASTAFSRVLTLMQVPQTVSAWILAHFANE
IVLLIVINVFLLIVGMVMDTTPAILILSPILLPIVQSIGMNPIHFGVVMIVNLAIGFVTPPIGVNLFVASSLTDVPVMRI
AKKAAPMIGYFLLALLLLTFIPVISLCLL

Sequences:

>Translated_429_residues
MSAAVVFILFVICLVIAIPVSISLGIVAVLPGAFDSSFTASASYVIRSMLGGIDSFPLLAVPMFVLAGIVMAHGKISQKL
FDVFVYFIGKRTAGIPCAVIITCLFYGAISGSAPATVAAVGSMTIPLLMELGYKKDFSTAIVAVAGGLGVIIPPSIPFIM
YAMATGESVSDLFLAGIIPGLLIGALLMFYAYYHCKRYGEDKEKINAKVSELRSKGLFSILKDSIWALLSPVIVLGCIYA
GIASPTEAAVISVFYALFVSLFIYKSIKVKEIWGIMVEAMKTYAPILFILAASTAFSRVLTLMQVPQTVSAWILAHFANE
IVLLIVINVFLLIVGMVMDTTPAILILSPILLPIVQSIGMNPIHFGVVMIVNLAIGFVTPPIGVNLFVASSLTDVPVMRI
AKKAAPMIGYFLLALLLLTFIPVISLCLL
>Mature_428_residues
SAAVVFILFVICLVIAIPVSISLGIVAVLPGAFDSSFTASASYVIRSMLGGIDSFPLLAVPMFVLAGIVMAHGKISQKLF
DVFVYFIGKRTAGIPCAVIITCLFYGAISGSAPATVAAVGSMTIPLLMELGYKKDFSTAIVAVAGGLGVIIPPSIPFIMY
AMATGESVSDLFLAGIIPGLLIGALLMFYAYYHCKRYGEDKEKINAKVSELRSKGLFSILKDSIWALLSPVIVLGCIYAG
IASPTEAAVISVFYALFVSLFIYKSIKVKEIWGIMVEAMKTYAPILFILAASTAFSRVLTLMQVPQTVSAWILAHFANEI
VLLIVINVFLLIVGMVMDTTPAILILSPILLPIVQSIGMNPIHFGVVMIVNLAIGFVTPPIGVNLFVASSLTDVPVMRIA
KKAAPMIGYFLLALLLLTFIPVISLCLL

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=423, Percent_Identity=33.806146572104, Blast_Score=212, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45719; Mature: 45588

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCC
>Mature Secondary Structure 
SAAVVFILFVICLVIAIPVSISLGIVAVLPGAFDSSFTASASYVIRSMLGGIDSFPLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
VPMFVLAGIVMAHGKISQKLFDVFVYFIGKRTAGIPCAVIITCLFYGAISGSAPATVAAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHH
GSMTIPLLMELGYKKDFSTAIVAVAGGLGVIIPPSIPFIMYAMATGESVSDLFLAGIIPG
HHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHH
LLIGALLMFYAYYHCKRYGEDKEKINAKVSELRSKGLFSILKDSIWALLSPVIVLGCIYA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIASPTEAAVISVFYALFVSLFIYKSIKVKEIWGIMVEAMKTYAPILFILAASTAFSRVL
HCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLMQVPQTVSAWILAHFANEIVLLIVINVFLLIVGMVMDTTPAILILSPILLPIVQSIGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
NPIHFGVVMIVNLAIGFVTPPIGVNLFVASSLTDVPVMRIAKKAAPMIGYFLLALLLLTF
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IPVISLCLL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]