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The map label for this gene is rpfG [H]

Identifier: 238925153

GI number: 238925153

Start: 2684543

End: 2685640

Strand: Direct

Name: rpfG [H]

Synonym: EUBREC_2806

Alternate gene names: 238925153

Gene position: 2684543-2685640 (Clockwise)

Preceding gene: 238925152

Following gene: 238925161

Centisome position: 77.82

GC content: 45.36

Gene sequence:

>1098_bases
ATGATTAAACGCAGATATATGAGAACACGACAATTGAAACCCGGCATGATTATTGATCAGGTCATCAAGGATCCTACCGG
CCGTAACCTGGTGGTACAGGGCTCAGCTATCGATGATTATATCATCTCTTCGCTGCTTAAGCTCGGTATAATGTCAGTAT
ACATCCGCGAGGGAAATGCTGATCCTGACGATCCGGATGCCATACTGTCTCCAAAGGCTGCCGCCATGGTCAAACAGCTG
CGTACGGACGACCGTTCCAAAGTCACCTTAAGCGACAGTGTCAGGCAACGTGTATCAACCGGTGTCCAGTACATCTTCAA
CAACACTAACTCCGAGGAGCTAACACAGGCAACAAACCAGATTGCAGACTCGCTCATGGAGGCCATCAATGAAAACGATG
CCATAGCTGTCGATATCAGTTCCCTCAAAACAAGCGATGAGTACACCTTCAAGCACAGTGTGGATGTGGCTACTATTTCA
ATGATTCTTGCCAAGCAGATGAAGCTGCCTGACAACGAAATCCACGACATAGGTGTATCCGGCCTGCTGCACGATATAGG
CAAGACAATGATCCCCAATGAAATTCTAAACAAGCCTGGCAGGCTCACGGATGATGAGTTTAATATCATGAAAAAACATT
CCGTGTACGGCTACAATATGCTAAAAGACCGAAAGGATTTAAACAACTCTATACTGATGGGAGTGCTGCAGCACCACGAA
CGCATTGACGGAACCGGATATCCACTCGGCTTTGATGCACCAAAAATCTGTCAGTTTGCAAAGATTTTGTCTGTCGCAGA
TGTCTATGATGCGCTTGTCACAAAGCGTCCGTACAAGGATGCCTTATCACAGCGTGATGCAGTTGAGATGCTTATGTCCA
TGACAAACCAGCTTGATATAGGTGTCATGCGTGCTTTCATGAGCAGTATGATTCTATATCCTGTTGATTCAATTGTACAG
CTTAGCAATGGTGAAAAGGCAAGAGTTGTAAAAAACAGTGAGTACTACATTCTCCGACCAACTGTTGTCGGTGTCGATTC
CGGCAGAGTATACAATCTGGGCAATGATTTGAAGTGCGCAAGTATTATTATACTTTAG

Upstream 100 bases:

>100_bases
AAATCTCAATTTGTGATTGTTTTTAGTACAAATATACTATATAATATTCGTAGTATTTTGAATTGTTTTTAGAGTAGACT
TATTTAGTTTTGGTGCAAAA

Downstream 100 bases:

>100_bases
ACATAATGATTTGAGCCACCTTAAGAATAAAAAAGCTGATGCGTCATGCTTACATGCAGGCATCAGCTTTTTGTTCTAAG
TGGTTTTATAGTTATTAATT

Product: two-component system response regulator RpfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MIKRRYMRTRQLKPGMIIDQVIKDPTGRNLVVQGSAIDDYIISSLLKLGIMSVYIREGNADPDDPDAILSPKAAAMVKQL
RTDDRSKVTLSDSVRQRVSTGVQYIFNNTNSEELTQATNQIADSLMEAINENDAIAVDISSLKTSDEYTFKHSVDVATIS
MILAKQMKLPDNEIHDIGVSGLLHDIGKTMIPNEILNKPGRLTDDEFNIMKKHSVYGYNMLKDRKDLNNSILMGVLQHHE
RIDGTGYPLGFDAPKICQFAKILSVADVYDALVTKRPYKDALSQRDAVEMLMSMTNQLDIGVMRAFMSSMILYPVDSIVQ
LSNGEKARVVKNSEYYILRPTVVGVDSGRVYNLGNDLKCASIIIL

Sequences:

>Translated_365_residues
MIKRRYMRTRQLKPGMIIDQVIKDPTGRNLVVQGSAIDDYIISSLLKLGIMSVYIREGNADPDDPDAILSPKAAAMVKQL
RTDDRSKVTLSDSVRQRVSTGVQYIFNNTNSEELTQATNQIADSLMEAINENDAIAVDISSLKTSDEYTFKHSVDVATIS
MILAKQMKLPDNEIHDIGVSGLLHDIGKTMIPNEILNKPGRLTDDEFNIMKKHSVYGYNMLKDRKDLNNSILMGVLQHHE
RIDGTGYPLGFDAPKICQFAKILSVADVYDALVTKRPYKDALSQRDAVEMLMSMTNQLDIGVMRAFMSSMILYPVDSIVQ
LSNGEKARVVKNSEYYILRPTVVGVDSGRVYNLGNDLKCASIIIL
>Mature_365_residues
MIKRRYMRTRQLKPGMIIDQVIKDPTGRNLVVQGSAIDDYIISSLLKLGIMSVYIREGNADPDDPDAILSPKAAAMVKQL
RTDDRSKVTLSDSVRQRVSTGVQYIFNNTNSEELTQATNQIADSLMEAINENDAIAVDISSLKTSDEYTFKHSVDVATIS
MILAKQMKLPDNEIHDIGVSGLLHDIGKTMIPNEILNKPGRLTDDEFNIMKKHSVYGYNMLKDRKDLNNSILMGVLQHHE
RIDGTGYPLGFDAPKICQFAKILSVADVYDALVTKRPYKDALSQRDAVEMLMSMTNQLDIGVMRAFMSSMILYPVDSIVQ
LSNGEKARVVKNSEYYILRPTVVGVDSGRVYNLGNDLKCASIIIL

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 40742; Mature: 40742

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRRYMRTRQLKPGMIIDQVIKDPTGRNLVVQGSAIDDYIISSLLKLGIMSVYIREGNA
CCCHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEECCCC
DPDDPDAILSPKAAAMVKQLRTDDRSKVTLSDSVRQRVSTGVQYIFNNTNSEELTQATNQ
CCCCCCHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
IADSLMEAINENDAIAVDISSLKTSDEYTFKHSVDVATISMILAKQMKLPDNEIHDIGVS
HHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GLLHDIGKTMIPNEILNKPGRLTDDEFNIMKKHSVYGYNMLKDRKDLNNSILMGVLQHHE
HHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RIDGTGYPLGFDAPKICQFAKILSVADVYDALVTKRPYKDALSQRDAVEMLMSMTNQLDI
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVMRAFMSSMILYPVDSIVQLSNGEKARVVKNSEYYILRPTVVGVDSGRVYNLGNDLKCA
HHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCEEEECCEEEECCCCCEEECCCCCCCE
SIIIL
EEEEC
>Mature Secondary Structure
MIKRRYMRTRQLKPGMIIDQVIKDPTGRNLVVQGSAIDDYIISSLLKLGIMSVYIREGNA
CCCHHHHHHHCCCCCHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHEEEECCCC
DPDDPDAILSPKAAAMVKQLRTDDRSKVTLSDSVRQRVSTGVQYIFNNTNSEELTQATNQ
CCCCCCHHCCCHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
IADSLMEAINENDAIAVDISSLKTSDEYTFKHSVDVATISMILAKQMKLPDNEIHDIGVS
HHHHHHHHHCCCCEEEEEHHHCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHH
GLLHDIGKTMIPNEILNKPGRLTDDEFNIMKKHSVYGYNMLKDRKDLNNSILMGVLQHHE
HHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH
RIDGTGYPLGFDAPKICQFAKILSVADVYDALVTKRPYKDALSQRDAVEMLMSMTNQLDI
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
GVMRAFMSSMILYPVDSIVQLSNGEKARVVKNSEYYILRPTVVGVDSGRVYNLGNDLKCA
HHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCEEEECCEEEECCCCCEEECCCCCCCE
SIIIL
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]