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The map label for this gene is yibD [C]

Identifier: 238925124

GI number: 238925124

Start: 2655115

End: 2656287

Strand: Reverse

Name: yibD [C]

Synonym: EUBREC_2777

Alternate gene names: 238925124

Gene position: 2656287-2655115 (Counterclockwise)

Preceding gene: 238925125

Following gene: 238925123

Centisome position: 77.0

GC content: 40.58

Gene sequence:

>1173_bases
ATGAGTAAAATATTATCAATCATAATACCAACATATAATGCAGAAAAGTTTCTGAATAAGGGGCTGTCGTCATTTCTGGT
ATGCAGGGATACAGATGCACAGACAGCACAGCACAACTGTAAAATGGCAACGGAGGGCCGCTTTGAGGAAATAGATATTG
ACAAGGCTATACTCGATAAGCTTGAGGTGATAGTCGTAAATGACGGCACACCTGACAAAAGTGTTGAAGTGGCGCAGAAA
TTTGTGGACTGGTATCCGGATACCTTTGTCATAGTAAATAAAACAAATGGTGGACACGGTTCTGCAATCAACACAGGCGT
GGAGCATGTGAGAGGAAAGTATTTAAAGGTGGTCGATGCAGATGACTGGGTAGATACGCTTGCGCTAAAGAAGTTAATTA
CCACATTGCAGGTATTAGAGGCAGCACAGGAAAAGCAGGATACGCGTGTCATGGATGCTATGTTGATGAGCTATACTACC
TACGATCTGCAGAAAGCAGCCAAAGGAGATATACCTTACGAGGAGCATCTTGTTGTTCCGGGAACAAAGCATGATAAGAG
TGTGGATATTCAAAATCTGGGAGGACCATATTCATCACAGGTGATAGCAAAACACTTTGATGATGTATACTGGGGACTTA
CATTTCACGGCATATTATATAACACTGCATTTTACAGAGGGCTTGCACATAAATTGGCAGAGGGCATTTTCTATGAGGAT
CAGGAATATGCTGCAGTGCCGATGGCATATGCTGATACCATATATGTATATGATGAGCAGCTATATCAGTATAGGATAGG
CGATGTAAGCCAGAGCATATCTATGGAAAGCTCGCTTAAGAGGCTGTCTCACTATGAGACGGTCATCAGAACATTGATTG
CTGAAGGGGGTAATTCAGAAGAATTTGCACCGGGAGGTAAGCAAATATGGGGCATAAAGACTGCAAAGTTCATAGATGAT
TACTATCAGCTGTGTCTTATAAAAAATCCGGACAAAAAGATGCTGAGAGATAGGATGGAGAAATTTACATCTGAGATAAA
GTCGGCAGACGGATATATATATGGTCTGATAGAAAAGAACTACAAGGTTTTTAGGATGTTAAATAAGCTTCATATGAATG
AAAAAGTCTATCAGAAGGTGTTTATACCAATGGTGCACTTAATCAGAAAATAA

Upstream 100 bases:

>100_bases
GGTCTATAGCAGACTGCGTGGTAATTAATTTTATGAATAGGCGTTAATGAGTATGCAATACTCTTTTTAATAATAGTAAT
CAGGACGGATAGAACAGTTA

Downstream 100 bases:

>100_bases
TCATGAAAGAAACCAGAGAAGAGATGGAAACGAAAGTATTATCAATAATTGTACCCACATACAAAGCAGAACAGTTCCTT
GACAAGGGCTTGAGCAGCTT

Product: Glycosyltransferase Family 2-like b-glycosyltransferase

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyl Transferase GT2 Family Protein; Glycosyltransferase Family 2-Like B-Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase; Group 2 Family Glycosyltransferase; Glycosyltransferase-Like Protein; Sugar Transferase; TagF Domain-Containing Protein; Glycosyltransferase Group 2 Family Protein; Glycosyl Transferase Group 2 Family; Family 2 Glycosyl Transferase; Teichoic Acid Biosynthesis Protein

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSKILSIIIPTYNAEKFLNKGLSSFLVCRDTDAQTAQHNCKMATEGRFEEIDIDKAILDKLEVIVVNDGTPDKSVEVAQK
FVDWYPDTFVIVNKTNGGHGSAINTGVEHVRGKYLKVVDADDWVDTLALKKLITTLQVLEAAQEKQDTRVMDAMLMSYTT
YDLQKAAKGDIPYEEHLVVPGTKHDKSVDIQNLGGPYSSQVIAKHFDDVYWGLTFHGILYNTAFYRGLAHKLAEGIFYED
QEYAAVPMAYADTIYVYDEQLYQYRIGDVSQSISMESSLKRLSHYETVIRTLIAEGGNSEEFAPGGKQIWGIKTAKFIDD
YYQLCLIKNPDKKMLRDRMEKFTSEIKSADGYIYGLIEKNYKVFRMLNKLHMNEKVYQKVFIPMVHLIRK

Sequences:

>Translated_390_residues
MSKILSIIIPTYNAEKFLNKGLSSFLVCRDTDAQTAQHNCKMATEGRFEEIDIDKAILDKLEVIVVNDGTPDKSVEVAQK
FVDWYPDTFVIVNKTNGGHGSAINTGVEHVRGKYLKVVDADDWVDTLALKKLITTLQVLEAAQEKQDTRVMDAMLMSYTT
YDLQKAAKGDIPYEEHLVVPGTKHDKSVDIQNLGGPYSSQVIAKHFDDVYWGLTFHGILYNTAFYRGLAHKLAEGIFYED
QEYAAVPMAYADTIYVYDEQLYQYRIGDVSQSISMESSLKRLSHYETVIRTLIAEGGNSEEFAPGGKQIWGIKTAKFIDD
YYQLCLIKNPDKKMLRDRMEKFTSEIKSADGYIYGLIEKNYKVFRMLNKLHMNEKVYQKVFIPMVHLIRK
>Mature_389_residues
SKILSIIIPTYNAEKFLNKGLSSFLVCRDTDAQTAQHNCKMATEGRFEEIDIDKAILDKLEVIVVNDGTPDKSVEVAQKF
VDWYPDTFVIVNKTNGGHGSAINTGVEHVRGKYLKVVDADDWVDTLALKKLITTLQVLEAAQEKQDTRVMDAMLMSYTTY
DLQKAAKGDIPYEEHLVVPGTKHDKSVDIQNLGGPYSSQVIAKHFDDVYWGLTFHGILYNTAFYRGLAHKLAEGIFYEDQ
EYAAVPMAYADTIYVYDEQLYQYRIGDVSQSISMESSLKRLSHYETVIRTLIAEGGNSEEFAPGGKQIWGIKTAKFIDDY
YQLCLIKNPDKKMLRDRMEKFTSEIKSADGYIYGLIEKNYKVFRMLNKLHMNEKVYQKVFIPMVHLIRK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44536; Mature: 44405

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILSIIIPTYNAEKFLNKGLSSFLVCRDTDAQTAQHNCKMATEGRFEEIDIDKAILDK
CCCEEEEEECCCCHHHHHHCCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHCC
LEVIVVNDGTPDKSVEVAQKFVDWYPDTFVIVNKTNGGHGSAINTGVEHVRGKYLKVVDA
EEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
DDWVDTLALKKLITTLQVLEAAQEKQDTRVMDAMLMSYTTYDLQKAAKGDIPYEEHLVVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
GTKHDKSVDIQNLGGPYSSQVIAKHFDDVYWGLTFHGILYNTAFYRGLAHKLAEGIFYED
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QEYAAVPMAYADTIYVYDEQLYQYRIGDVSQSISMESSLKRLSHYETVIRTLIAEGGNSE
CCCCCCEEHHHCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EFAPGGKQIWGIKTAKFIDDYYQLCLIKNPDKKMLRDRMEKFTSEIKSADGYIYGLIEKN
CCCCCCCEEECCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
YKVFRMLNKLHMNEKVYQKVFIPMVHLIRK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKILSIIIPTYNAEKFLNKGLSSFLVCRDTDAQTAQHNCKMATEGRFEEIDIDKAILDK
CCEEEEEECCCCHHHHHHCCHHHEEEEECCCCHHHHCCCCCCCCCCCCCCCCCHHHHCC
LEVIVVNDGTPDKSVEVAQKFVDWYPDTFVIVNKTNGGHGSAINTGVEHVRGKYLKVVDA
EEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCEEEEECC
DDWVDTLALKKLITTLQVLEAAQEKQDTRVMDAMLMSYTTYDLQKAAKGDIPYEEHLVVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECC
GTKHDKSVDIQNLGGPYSSQVIAKHFDDVYWGLTFHGILYNTAFYRGLAHKLAEGIFYED
CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QEYAAVPMAYADTIYVYDEQLYQYRIGDVSQSISMESSLKRLSHYETVIRTLIAEGGNSE
CCCCCCEEHHHCEEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EFAPGGKQIWGIKTAKFIDDYYQLCLIKNPDKKMLRDRMEKFTSEIKSADGYIYGLIEKN
CCCCCCCEEECCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
YKVFRMLNKLHMNEKVYQKVFIPMVHLIRK
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA