| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is epsJ [H]
Identifier: 238925123
GI number: 238925123
Start: 2654033
End: 2655091
Strand: Reverse
Name: epsJ [H]
Synonym: EUBREC_2776
Alternate gene names: 238925123
Gene position: 2655091-2654033 (Counterclockwise)
Preceding gene: 238925124
Following gene: 238925122
Centisome position: 76.97
GC content: 41.83
Gene sequence:
>1059_bases ATGGAAACGAAAGTATTATCAATAATTGTACCCACATACAAAGCAGAACAGTTCCTTGACAAGGGCTTGAGCAGCTTTAT ACTTGACGATGGGCTTATGGACAAGCTCGAGGTAATTGTGGTGGACGACGGAACACCTGATAATAGTGTTGAAGTGGCTA AAAAGTATATTAGTAGATATCCGGGAACATTTAGGGTACTTAGTAAGAAAAATGGAGGACATGGTTCTGCCATAAATGCC GGTATACAGGTAGCGGAGGGAAAATACTTTCAGGTGGTAGATGCGGATGATTGGGTAGATACGGACATATTGTCAGACAC AGTGGAAATGCTTGAAAAAAATGATGCAGATGCGTTTATACATGCACATCGCACATATGATATAAGCACGGAGCAGATAG AACATAAGCATGTGCGGTGTCCGGATGAGTCTAAACAATACAATCTTGAGCAGATGATGAGCTTTTGGGATGATATATAC TGGGGCCTTACATTCCATGGAGTATTATACAATACAGAGTTCTACAGACGGCTTGGATACAGCCTTATAGAGGGAGTATA CTATGAGGATCAGGAGTATTCGACTATACCGCTTGCATTTGCACAAAAGATTAGGATATATGATGGAGAACTATATGTTT ATCGTATAGGAGATGTCAATCAGAGTGTCAGTACCAAAAGCCTTATAAAACGTCTGCCGGATTTGGAACAGGTGATAATC CGTCTGGCACAGGGATGCAGCCTGAAGGAAAAATTCGCAGCGGGCGGTGAGCGATATTGGCTTAAAAAGCTCACAAAGTG TGTCACAGACTACTATCATGTGGCTCTTATAATCAATTCTGATAAGAGAGCAGGCCGGAAAAGAGTGAAAGAACTGAATA GAAAGCTGCGTGGAGAGTATCCATGGCTGTATGATATGTGCCATGCGAAATACATGATATTTGATGTGTGCAGTCATTTG CATATGAGCGAGCATATGTATACAGTGACTATAGGCAGTCTTACTGAGCTTCGCAGCAGGATGAAGCGTGCGAATAAATT GCCACTTGAGTGTGTATAA
Upstream 100 bases:
>100_bases TGTTAAATAAGCTTCATATGAATGAAAAAGTCTATCAGAAGGTGTTTATACCAATGGTGCACTTAATCAGAAAATAATCA TGAAAGAAACCAGAGAAGAG
Downstream 100 bases:
>100_bases ATAAAGTGGTACAATAATTTGCTGTGAGAAATAATATAGTAGAGAAGAGGATGAATATGAAAGAGATAAAAGTAAAGCTT CTTGTTATATTTACCTTGGT
Product: Glycosyltransferase Family 2-like b-glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues METKVLSIIVPTYKAEQFLDKGLSSFILDDGLMDKLEVIVVDDGTPDNSVEVAKKYISRYPGTFRVLSKKNGGHGSAINA GIQVAEGKYFQVVDADDWVDTDILSDTVEMLEKNDADAFIHAHRTYDISTEQIEHKHVRCPDESKQYNLEQMMSFWDDIY WGLTFHGVLYNTEFYRRLGYSLIEGVYYEDQEYSTIPLAFAQKIRIYDGELYVYRIGDVNQSVSTKSLIKRLPDLEQVII RLAQGCSLKEKFAAGGERYWLKKLTKCVTDYYHVALIINSDKRAGRKRVKELNRKLRGEYPWLYDMCHAKYMIFDVCSHL HMSEHMYTVTIGSLTELRSRMKRANKLPLECV
Sequences:
>Translated_352_residues METKVLSIIVPTYKAEQFLDKGLSSFILDDGLMDKLEVIVVDDGTPDNSVEVAKKYISRYPGTFRVLSKKNGGHGSAINA GIQVAEGKYFQVVDADDWVDTDILSDTVEMLEKNDADAFIHAHRTYDISTEQIEHKHVRCPDESKQYNLEQMMSFWDDIY WGLTFHGVLYNTEFYRRLGYSLIEGVYYEDQEYSTIPLAFAQKIRIYDGELYVYRIGDVNQSVSTKSLIKRLPDLEQVII RLAQGCSLKEKFAAGGERYWLKKLTKCVTDYYHVALIINSDKRAGRKRVKELNRKLRGEYPWLYDMCHAKYMIFDVCSHL HMSEHMYTVTIGSLTELRSRMKRANKLPLECV >Mature_352_residues METKVLSIIVPTYKAEQFLDKGLSSFILDDGLMDKLEVIVVDDGTPDNSVEVAKKYISRYPGTFRVLSKKNGGHGSAINA GIQVAEGKYFQVVDADDWVDTDILSDTVEMLEKNDADAFIHAHRTYDISTEQIEHKHVRCPDESKQYNLEQMMSFWDDIY WGLTFHGVLYNTEFYRRLGYSLIEGVYYEDQEYSTIPLAFAQKIRIYDGELYVYRIGDVNQSVSTKSLIKRLPDLEQVII RLAQGCSLKEKFAAGGERYWLKKLTKCVTDYYHVALIINSDKRAGRKRVKELNRKLRGEYPWLYDMCHAKYMIFDVCSHL HMSEHMYTVTIGSLTELRSRMKRANKLPLECV
Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1790044, Length=231, Percent_Identity=30.3030303030303, Blast_Score=79, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 40749; Mature: 40749
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKVLSIIVPTYKAEQFLDKGLSSFILDDGLMDKLEVIVVDDGTPDNSVEVAKKYISRY CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC PGTFRVLSKKNGGHGSAINAGIQVAEGKYFQVVDADDWVDTDILSDTVEMLEKNDADAFI CCEEEEEECCCCCCCCHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE HAHRTYDISTEQIEHKHVRCPDESKQYNLEQMMSFWDDIYWGLTFHGVLYNTEFYRRLGY EEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHEECHHHHHHHHH SLIEGVYYEDQEYSTIPLAFAQKIRIYDGELYVYRIGDVNQSVSTKSLIKRLPDLEQVII HHHHCEEECCCCCCEEHHHHHCEEEEEECEEEEEEECCCCCCCHHHHHHHHCCCHHHHHH RLAQGCSLKEKFAAGGERYWLKKLTKCVTDYYHVALIINSDKRAGRKRVKELNRKLRGEY HHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHCCCC PWLYDMCHAKYMIFDVCSHLHMSEHMYTVTIGSLTELRSRMKRANKLPLECV CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure METKVLSIIVPTYKAEQFLDKGLSSFILDDGLMDKLEVIVVDDGTPDNSVEVAKKYISRY CCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHC PGTFRVLSKKNGGHGSAINAGIQVAEGKYFQVVDADDWVDTDILSDTVEMLEKNDADAFI CCEEEEEECCCCCCCCHHHCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE HAHRTYDISTEQIEHKHVRCPDESKQYNLEQMMSFWDDIYWGLTFHGVLYNTEFYRRLGY EEEEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEHHEECHHHHHHHHH SLIEGVYYEDQEYSTIPLAFAQKIRIYDGELYVYRIGDVNQSVSTKSLIKRLPDLEQVII HHHHCEEECCCCCCEEHHHHHCEEEEEECEEEEEEECCCCCCCHHHHHHHHCCCHHHHHH RLAQGCSLKEKFAAGGERYWLKKLTKCVTDYYHVALIINSDKRAGRKRVKELNRKLRGEY HHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEEECCHHHHHHHHHHHHHHHCCCC PWLYDMCHAKYMIFDVCSHLHMSEHMYTVTIGSLTELRSRMKRANKLPLECV CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969506; 9384377 [H]