| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238925122
Identifier: 238925122
GI number: 238925122
Start: 2651844
End: 2653982
Strand: Reverse
Name: 238925122
Synonym: EUBREC_2775
Alternate gene names: NA
Gene position: 2653982-2651844 (Counterclockwise)
Preceding gene: 238925123
Following gene: 238925121
Centisome position: 76.93
GC content: 42.45
Gene sequence:
>2139_bases ATGAATATGAAAGAGATAAAAGTAAAGCTTCTTGTTATATTTACCTTGGTGCTGACAACATTAGGGCTTGCAGGCTGTGG CAAGAAGGATTATAAGACCTTTCCGGATAAGTACACGCTTTCATCAGTGGATGTAGGAGGCATGACAGCGAAAGAAGCAA AGAAAGCTATCAAGAAGGCAATAGATAAATACCAGATTAAAGTAAAGCTTGATGATGCAGAGTTTGAAATGAATGCAGAG GATCTCGGACTTGAGTATAATGAAAAGGCGGATATGCAGACTCTCATCAATGCAGCAAATAGAAATAAAGTGCCGGATAA GCAGGTCAAACTGTTTAACATGAAAAAGGGTGATGAAATGCAAAATGCACTCGTTGATTCATATATCACAGCCATGACAG AGGCACAGACAGATAGTACTTCTAATACAGATAATGATACTGATGATACAAAGCAGGCAGATAAATCAGATGCTGAAATA TTTGACATAAAGACAGTAGTGCCTTATCGTGCTACCATCACCTATAATGCTGATGCAGGTCAGTTTGAAGGAGTGGATGG AGTATCAGGAGACGCTCCGATATATGATAAAGCAGCTACCAAACTTTCAAGTGCTGTAAAGGAAATGAAGAAGAAAGCAG AGCTTGAATCATCTACAGGCTACGTAGAAGGCGAAAAGGCAGCGGATAGTGATGCAGTCAAGAAAGCACTCAAGGAAGCT GATGCATACCTTGATGTCACGGTAACATGCAACTTTAATCCGGCTACAGGTGAGCCTGCTACGGAGACTGTAGCTAAAGA ACAGATAGCACAGTGGCTTATAGTGGGTAATGATGGTCTTACAGTATCGCTGGATGGTGAAAATATGGCTACATATTGTA CACAGCTGGCGCAAAAGCATGATGTTTCAAAGAAGAAAACAGGTAAGTTTAAGACTACAAGTGGAGATACAATAGATGTA CCGGTAGCATCATCTGGTCAGACCGTAGATGGAAATAAGCTTTATGAATCAATTTATGAAGCTATAGATGGAAAAAAATC AACAACGGTCGAGGCTGTATATAGTGAGGCAAAGGTTGAAGAGACAGGTGAATTTGTCACATATGGTGGCAACTACTGTG AGGTTGATTTGACAAATCAGATGGTATATGTATACAAGGATGGCAAGCAGGTAGTGTCAAGCCAGTGTGTTACCGGCTGT ATAGCAAAAGGACATGGTACACCTACAGGAGTATACTCCATATTCTCAATGGACAAGGATAGATACTTAAGGGGAGATGG ATACAAGTCGTGGGTAAATTTCTTTGTTCCGTTTAACGGAGGTATAGGTTTTCATGATGCTTCGTGGAGGAGCACATTTG GAGGTAATATATACCTGTACAGCGGAAGTCATGGATGTATTAATATGCCATATTCTGAGGTGAAAAAGCTGTTTGCTAAT GTGTCAATGGGCGAGACCGTTATAGTATATGGTGGAGCAACGTCAGTTGATGGCAAAGAACAGTCATTTACAGGACAGGA TGCTTACAGTGTGACAGAGGGGGATGCCAGCTTTAATCTTGGAGTGACAGCACAGGATAATGCCAAGCTCACATATGTCA GTGACAATGAGTGGGTGGCGAAAGTTGATGAGAGTGGAAATGTGACACCTGTTGGAGTAGGAACAGCCACCATTACAGTA AAGTCTGAGGCAACAGCAGGCTATAGGGCAGGAACCAAGACCATTACTGTCACAGTTAATGCTAAAGCTCAGCCACAGGT ACAGCCACAAAAGCCGGCGCAGCAACAGCCGCAAAAGCCGGCGCAGCAGCAACAACCACAAAAACCGGCAGCAAAGAAAG ATGCTTCTGTCAATGTGAGTGAGTCAGACGTATCATTGGAGATAAATGGTACAAAGAAGATAAACATATCAGTAAGCAGT GATACAGGTGCAACAGTAGAGGTGGAATCAGGAGATGCCTCAGTAGCAACACTTGACAGCAATGGTAACATTGTTGCAAA GAATGAGGGACAGGTGACGTACAAAGTATACACCAAGGCCACAGGAAGCTATAATGCAAGCAATGTATCATATGTTACAA TCAAAGTTTCAAAACCGGCAGAACCGGATGATAGCGGAGCAGATGCGGACAGAGAATAG
Upstream 100 bases:
>100_bases TTCGCAGCAGGATGAAGCGTGCGAATAAATTGCCACTTGAGTGTGTATAAATAAAGTGGTACAATAATTTGCTGTGAGAA ATAATATAGTAGAGAAGAGG
Downstream 100 bases:
>100_bases TGCAGATGAAAAGGAAAAGGAACGTAATCACAGCAATAGTATTTATAATGTTCATAGCACTTATAGTGCTCATAGTTGCG ATATTGATAAAGATAACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; ErfK Family Protein; YkuD Domain-Containing Protein; Ykud Domain-Containing Protein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG Family; Extracellular Protein
Number of amino acids: Translated: 712; Mature: 712
Protein sequence:
>712_residues MNMKEIKVKLLVIFTLVLTTLGLAGCGKKDYKTFPDKYTLSSVDVGGMTAKEAKKAIKKAIDKYQIKVKLDDAEFEMNAE DLGLEYNEKADMQTLINAANRNKVPDKQVKLFNMKKGDEMQNALVDSYITAMTEAQTDSTSNTDNDTDDTKQADKSDAEI FDIKTVVPYRATITYNADAGQFEGVDGVSGDAPIYDKAATKLSSAVKEMKKKAELESSTGYVEGEKAADSDAVKKALKEA DAYLDVTVTCNFNPATGEPATETVAKEQIAQWLIVGNDGLTVSLDGENMATYCTQLAQKHDVSKKKTGKFKTTSGDTIDV PVASSGQTVDGNKLYESIYEAIDGKKSTTVEAVYSEAKVEETGEFVTYGGNYCEVDLTNQMVYVYKDGKQVVSSQCVTGC IAKGHGTPTGVYSIFSMDKDRYLRGDGYKSWVNFFVPFNGGIGFHDASWRSTFGGNIYLYSGSHGCINMPYSEVKKLFAN VSMGETVIVYGGATSVDGKEQSFTGQDAYSVTEGDASFNLGVTAQDNAKLTYVSDNEWVAKVDESGNVTPVGVGTATITV KSEATAGYRAGTKTITVTVNAKAQPQVQPQKPAQQQPQKPAQQQQPQKPAAKKDASVNVSESDVSLEINGTKKINISVSS DTGATVEVESGDASVATLDSNGNIVAKNEGQVTYKVYTKATGSYNASNVSYVTIKVSKPAEPDDSGADADRE
Sequences:
>Translated_712_residues MNMKEIKVKLLVIFTLVLTTLGLAGCGKKDYKTFPDKYTLSSVDVGGMTAKEAKKAIKKAIDKYQIKVKLDDAEFEMNAE DLGLEYNEKADMQTLINAANRNKVPDKQVKLFNMKKGDEMQNALVDSYITAMTEAQTDSTSNTDNDTDDTKQADKSDAEI FDIKTVVPYRATITYNADAGQFEGVDGVSGDAPIYDKAATKLSSAVKEMKKKAELESSTGYVEGEKAADSDAVKKALKEA DAYLDVTVTCNFNPATGEPATETVAKEQIAQWLIVGNDGLTVSLDGENMATYCTQLAQKHDVSKKKTGKFKTTSGDTIDV PVASSGQTVDGNKLYESIYEAIDGKKSTTVEAVYSEAKVEETGEFVTYGGNYCEVDLTNQMVYVYKDGKQVVSSQCVTGC IAKGHGTPTGVYSIFSMDKDRYLRGDGYKSWVNFFVPFNGGIGFHDASWRSTFGGNIYLYSGSHGCINMPYSEVKKLFAN VSMGETVIVYGGATSVDGKEQSFTGQDAYSVTEGDASFNLGVTAQDNAKLTYVSDNEWVAKVDESGNVTPVGVGTATITV KSEATAGYRAGTKTITVTVNAKAQPQVQPQKPAQQQPQKPAQQQQPQKPAAKKDASVNVSESDVSLEINGTKKINISVSS DTGATVEVESGDASVATLDSNGNIVAKNEGQVTYKVYTKATGSYNASNVSYVTIKVSKPAEPDDSGADADRE >Mature_712_residues MNMKEIKVKLLVIFTLVLTTLGLAGCGKKDYKTFPDKYTLSSVDVGGMTAKEAKKAIKKAIDKYQIKVKLDDAEFEMNAE DLGLEYNEKADMQTLINAANRNKVPDKQVKLFNMKKGDEMQNALVDSYITAMTEAQTDSTSNTDNDTDDTKQADKSDAEI FDIKTVVPYRATITYNADAGQFEGVDGVSGDAPIYDKAATKLSSAVKEMKKKAELESSTGYVEGEKAADSDAVKKALKEA DAYLDVTVTCNFNPATGEPATETVAKEQIAQWLIVGNDGLTVSLDGENMATYCTQLAQKHDVSKKKTGKFKTTSGDTIDV PVASSGQTVDGNKLYESIYEAIDGKKSTTVEAVYSEAKVEETGEFVTYGGNYCEVDLTNQMVYVYKDGKQVVSSQCVTGC IAKGHGTPTGVYSIFSMDKDRYLRGDGYKSWVNFFVPFNGGIGFHDASWRSTFGGNIYLYSGSHGCINMPYSEVKKLFAN VSMGETVIVYGGATSVDGKEQSFTGQDAYSVTEGDASFNLGVTAQDNAKLTYVSDNEWVAKVDESGNVTPVGVGTATITV KSEATAGYRAGTKTITVTVNAKAQPQVQPQKPAQQQPQKPAQQQQPQKPAAKKDASVNVSESDVSLEINGTKKINISVSS DTGATVEVESGDASVATLDSNGNIVAKNEGQVTYKVYTKATGSYNASNVSYVTIKVSKPAEPDDSGADADRE
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76485; Mature: 76485
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKEIKVKLLVIFTLVLTTLGLAGCGKKDYKTFPDKYTLSSVDVGGMTAKEAKKAIKKA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHH IDKYQIKVKLDDAEFEMNAEDLGLEYNEKADMQTLINAANRNKVPDKQVKLFNMKKGDEM HCEEEEEEEEECCCEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCHH QNALVDSYITAMTEAQTDSTSNTDNDTDDTKQADKSDAEIFDIKTVVPYRATITYNADAG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCEEEEEEECCCCC QFEGVDGVSGDAPIYDKAATKLSSAVKEMKKKAELESSTGYVEGEKAADSDAVKKALKEA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHC DAYLDVTVTCNFNPATGEPATETVAKEQIAQWLIVGNDGLTVSLDGENMATYCTQLAQKH CCEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHH DVSKKKTGKFKTTSGDTIDVPVASSGQTVDGNKLYESIYEAIDGKKSTTVEAVYSEAKVE CCCHHCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ETGEFVTYGGNYCEVDLTNQMVYVYKDGKQVVSSQCVTGCIAKGHGTPTGVYSIFSMDKD CCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC RYLRGDGYKSWVNFFVPFNGGIGFHDASWRSTFGGNIYLYSGSHGCINMPYSEVKKLFAN CEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHC VSMGETVIVYGGATSVDGKEQSFTGQDAYSVTEGDASFNLGVTAQDNAKLTYVSDNEWVA CCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCEEE KVDESGNVTPVGVGTATITVKSEATAGYRAGTKTITVTVNAKAQPQVQPQKPAQQQPQKP EECCCCCEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCC AQQQQPQKPAAKKDASVNVSESDVSLEINGTKKINISVSSDTGATVEVESGDASVATLDS HHHCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECC NGNIVAKNEGQVTYKVYTKATGSYNASNVSYVTIKVSKPAEPDDSGADADRE CCCEEEECCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MNMKEIKVKLLVIFTLVLTTLGLAGCGKKDYKTFPDKYTLSSVDVGGMTAKEAKKAIKKA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHH IDKYQIKVKLDDAEFEMNAEDLGLEYNEKADMQTLINAANRNKVPDKQVKLFNMKKGDEM HCEEEEEEEEECCCEEECHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCCCHH QNALVDSYITAMTEAQTDSTSNTDNDTDDTKQADKSDAEIFDIKTVVPYRATITYNADAG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEEEEECCEEEEEEECCCCC QFEGVDGVSGDAPIYDKAATKLSSAVKEMKKKAELESSTGYVEGEKAADSDAVKKALKEA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHC DAYLDVTVTCNFNPATGEPATETVAKEQIAQWLIVGNDGLTVSLDGENMATYCTQLAQKH CCEEEEEEEEECCCCCCCCHHHHHHHHHHEEEEEECCCCEEEEECCCCHHHHHHHHHHHH DVSKKKTGKFKTTSGDTIDVPVASSGQTVDGNKLYESIYEAIDGKKSTTVEAVYSEAKVE CCCHHCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH ETGEFVTYGGNYCEVDLTNQMVYVYKDGKQVVSSQCVTGCIAKGHGTPTGVYSIFSMDKD CCCCEEEECCCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC RYLRGDGYKSWVNFFVPFNGGIGFHDASWRSTFGGNIYLYSGSHGCINMPYSEVKKLFAN CEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCEEECCHHHHHHHHHC VSMGETVIVYGGATSVDGKEQSFTGQDAYSVTEGDASFNLGVTAQDNAKLTYVSDNEWVA CCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEEEEECCCEEE KVDESGNVTPVGVGTATITVKSEATAGYRAGTKTITVTVNAKAQPQVQPQKPAQQQPQKP EECCCCCEEEEECCEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHCCCCC AQQQQPQKPAAKKDASVNVSESDVSLEINGTKKINISVSSDTGATVEVESGDASVATLDS HHHCCCCCCCCCCCCCEEECCCCEEEEECCCEEEEEEEECCCCCEEEEECCCCEEEEECC NGNIVAKNEGQVTYKVYTKATGSYNASNVSYVTIKVSKPAEPDDSGADADRE CCCEEEECCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA