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The map label for this gene is wcaL [C]

Identifier: 238925007

GI number: 238925007

Start: 2534297

End: 2535400

Strand: Reverse

Name: wcaL [C]

Synonym: EUBREC_2658

Alternate gene names: 238925007

Gene position: 2535400-2534297 (Counterclockwise)

Preceding gene: 238925008

Following gene: 238925006

Centisome position: 73.5

GC content: 28.35

Gene sequence:

>1104_bases
ATGAAAGTTTTAAATTTATTATCTGCAGGTGGAATAGGCGGAATAGAACAGTTATGTAGCAATATTGCTAAGTATGCTAA
TTATGACAATACATTTTGCTTTATGTTTGAAGACGGACAAATATATAAAGAAATGAAGAAATCAGGGGCTGATGTAATCT
CTTTTGCAGAATGTTCTTCAAAAAAAATATCAAAAAAAAGATGGGAAAGCTTATGCGAATTAGCAGAAAAAGCTGATATA
ATAGTTACGCATCATTGTACCATAGCGTTGCATATTTATTATTGTGCATTAAAAAAAAGATTTAAAAATAAAAAATTTGT
TATGACTATACATTCATGCTTTGATCCGGAATTGAATTATAATTATGGATCATGGATTAAGAATAAAATAGCAAAATGGA
ATATAGAAGAGGCACTGAAGATATCTGATAAGATAATATTTGTTTCTGAAGCTGGACGAAGATCATATTTAGATAATTTC
AATATTGATGTAACAAAAACGAAAGTGATCTATAATGGAGTCGAAGTGTCAGCGATATCTATTGATAGCATAAAATTAGA
GAATAATTATACCCGTATTACTTATATTGGCAGAGTAGAAAAAATCAAAGGTTTGGATTTATTTGTATGCGCATTAAAAA
AATTATTGAATGACGATTCAAACATTAAAGTTTGGATAATTGGAGACGGCTCTTTTAGAAATGAATTGGAAATGCTGGTT
CAAAAATTGGATTTAACAGGAGTTATAGAATTTACAGGAGCAAAAAGAAATATTGGTGACTATTTAAGAAAGACTGATTT
ATTTATATATCCATCTACTTGTCAGGAAGTATTTGGGATTTCTATAGTTGAGGCTATGTCATATGGAGTACCTTGCGTTG
CTAATAATGTAGGAGGAATACCTGAGATTATAGAGAATGACTACAATGGTTTCATTACTTCTAAGACAAATGATGATGAA
TTATATAAATGTATGTATAAATTTATAAAGTTGGATCCAAAGTTAATTACACAAATGAGAAATAATTGTTTATTGACCGC
TGAAAAATTTAGTATTAATTGTACTATAGATAATTTGGAAAAAACTTTAAAAGGAATGATGTAA

Upstream 100 bases:

>100_bases
GAAAAAATGGCTTTGATATATACGATAATGCTAAAATTTTAGAGAAAATTTATAAATCCTAGTGACAAATTGGATAAAAT
AATGATTGATAGGAAGAAAA

Downstream 100 bases:

>100_bases
ATTGATAAGGAACAAAAAAGATTTAAAGCAATATTTAAAGCAGGACAAACAACAACTTGGGATAACAAGAAAATACCCAA
GACCATTTACTGACGAAATT

Product: Glycosyltransferase Family 4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MKVLNLLSAGGIGGIEQLCSNIAKYANYDNTFCFMFEDGQIYKEMKKSGADVISFAECSSKKISKKRWESLCELAEKADI
IVTHHCTIALHIYYCALKKRFKNKKFVMTIHSCFDPELNYNYGSWIKNKIAKWNIEEALKISDKIIFVSEAGRRSYLDNF
NIDVTKTKVIYNGVEVSAISIDSIKLENNYTRITYIGRVEKIKGLDLFVCALKKLLNDDSNIKVWIIGDGSFRNELEMLV
QKLDLTGVIEFTGAKRNIGDYLRKTDLFIYPSTCQEVFGISIVEAMSYGVPCVANNVGGIPEIIENDYNGFITSKTNDDE
LYKCMYKFIKLDPKLITQMRNNCLLTAEKFSINCTIDNLEKTLKGMM

Sequences:

>Translated_367_residues
MKVLNLLSAGGIGGIEQLCSNIAKYANYDNTFCFMFEDGQIYKEMKKSGADVISFAECSSKKISKKRWESLCELAEKADI
IVTHHCTIALHIYYCALKKRFKNKKFVMTIHSCFDPELNYNYGSWIKNKIAKWNIEEALKISDKIIFVSEAGRRSYLDNF
NIDVTKTKVIYNGVEVSAISIDSIKLENNYTRITYIGRVEKIKGLDLFVCALKKLLNDDSNIKVWIIGDGSFRNELEMLV
QKLDLTGVIEFTGAKRNIGDYLRKTDLFIYPSTCQEVFGISIVEAMSYGVPCVANNVGGIPEIIENDYNGFITSKTNDDE
LYKCMYKFIKLDPKLITQMRNNCLLTAEKFSINCTIDNLEKTLKGMM
>Mature_367_residues
MKVLNLLSAGGIGGIEQLCSNIAKYANYDNTFCFMFEDGQIYKEMKKSGADVISFAECSSKKISKKRWESLCELAEKADI
IVTHHCTIALHIYYCALKKRFKNKKFVMTIHSCFDPELNYNYGSWIKNKIAKWNIEEALKISDKIIFVSEAGRRSYLDNF
NIDVTKTKVIYNGVEVSAISIDSIKLENNYTRITYIGRVEKIKGLDLFVCALKKLLNDDSNIKVWIIGDGSFRNELEMLV
QKLDLTGVIEFTGAKRNIGDYLRKTDLFIYPSTCQEVFGISIVEAMSYGVPCVANNVGGIPEIIENDYNGFITSKTNDDE
LYKCMYKFIKLDPKLITQMRNNCLLTAEKFSINCTIDNLEKTLKGMM

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=206, Percent_Identity=25.2427184466019, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17532709, Length=245, Percent_Identity=26.530612244898, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24654571, Length=235, Percent_Identity=25.531914893617, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41799; Mature: 41799

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLNLLSAGGIGGIEQLCSNIAKYANYDNTFCFMFEDGQIYKEMKKSGADVISFAECSS
CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCEEEHHHHCC
KKISKKRWESLCELAEKADIIVTHHCTIALHIYYCALKKRFKNKKFVMTIHSCFDPELNY
HHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCC
NYGSWIKNKIAKWNIEEALKISDKIIFVSEAGRRSYLDNFNIDVTKTKVIYNGVEVSAIS
CHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCHHHCCCCCCEEEEEEEEECCEEEEEEE
IDSIKLENNYTRITYIGRVEKIKGLDLFVCALKKLLNDDSNIKVWIIGDGSFRNELEMLV
EEEEEECCCEEEEEEEECHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
QKLDLTGVIEFTGAKRNIGDYLRKTDLFIYPSTCQEVFGISIVEAMSYGVPCVANNVGGI
HHHCCCEEEEECCCCCCHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCCCC
PEIIENDYNGFITSKTNDDELYKCMYKFIKLDPKLITQMRNNCLLTAEKFSINCTIDNLE
HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEEEHHHHH
KTLKGMM
HHHHCCC
>Mature Secondary Structure
MKVLNLLSAGGIGGIEQLCSNIAKYANYDNTFCFMFEDGQIYKEMKKSGADVISFAECSS
CCHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHCCCCEEEHHHHCC
KKISKKRWESLCELAEKADIIVTHHCTIALHIYYCALKKRFKNKKFVMTIHSCFDPELNY
HHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEEHHCCCCCCC
NYGSWIKNKIAKWNIEEALKISDKIIFVSEAGRRSYLDNFNIDVTKTKVIYNGVEVSAIS
CHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCHHHCCCCCCEEEEEEEEECCEEEEEEE
IDSIKLENNYTRITYIGRVEKIKGLDLFVCALKKLLNDDSNIKVWIIGDGSFRNELEMLV
EEEEEECCCEEEEEEEECHHHHCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHH
QKLDLTGVIEFTGAKRNIGDYLRKTDLFIYPSTCQEVFGISIVEAMSYGVPCVANNVGGI
HHHCCCEEEEECCCCCCHHHHHHHCCEEEECHHHHHHHHHHHHHHHHCCCCEEECCCCCC
PEIIENDYNGFITSKTNDDELYKCMYKFIKLDPKLITQMRNNCLLTAEKFSINCTIDNLE
HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEEEHHHHH
KTLKGMM
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]