| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is yiaH [H]
Identifier: 238924993
GI number: 238924993
Start: 2523038
End: 2524075
Strand: Reverse
Name: yiaH [H]
Synonym: EUBREC_2644
Alternate gene names: 238924993
Gene position: 2524075-2523038 (Counterclockwise)
Preceding gene: 238924994
Following gene: 238924992
Centisome position: 73.17
GC content: 26.3
Gene sequence:
>1038_bases ATGGATAAACAAAAGCGAACTATATATTTTGATTATCTGAGAGTTATGGCAACGTTGGCGGTGATAATGTTGCATATGTC CGCTCAAAATTGGTACGTAAGTGATGTTAATGGATATAATTGGCAAGTATTTAATTTATATGACAGTATAGTCAGATGGG GTGTTCCTGTTTTTGTAATGATTAGTGGGGCACTGTTTTTAAAAAAGGAGTTGTCTTTAAAAGTAATATATACAAAATAT ATTTTCCGAATGGCAGTGTCTTTGGTAGTATGGTCAGCAATTTATGCATTATTTAGGTATGATGAACAGCAAGGACGCTT AATTAATTTTATTTCAGCCCCATATCATTTATGGTTTATCTTTATGATTATTGGATTATACATGATGATTCCAATCCTTA AAAAAGTGGTTGAAAATATGTATACATTGAGATATTTTTTATTTATGTCTTTTATTTTTGTTGGTTGTATCCCTGAATTG ATAACTATCATTCGTGATTTTTGCACGAATAGTACAATTTTGAATTGCCTTGAAATTATTGAAAAAAATATAAAGGAGTT GAACATAGCATTCGGATATTCTGCTTATTTTGTGTTGGGATTTTATTTAAGTAAAATTGAATTTAACAAAAAACAGAGAA AAATAATTTATATTTTAGGGTGTTTAGGCTTTATATTTACTATTGTAATGGATTCTTTTGTAGCATTAAAAAATCAACAA TATTGTAGCAACTATTATAATAATTTTATGATAAATGTTATGCTGGAAAGTATTGCGATATTTGTGTTTTTTAAATATAG AAAATTTAAAAATGATAACATAAATAAAGGCATCAGTTACATAGCACAAAGATGTTTTGGAATATATTTGGTTCATGTTC TTTTGATAAAAATATTAAAAGAACAGATGGAAATAAATACAATGACATTTAACGCTTTGATTTCAGTACCAGTTATAACA ATTTTGGTTTTTTCGATAGGGTTGATTTTATCAATAATATTAAACAAAATACCATATATAAAAAAATATATAATGTAA
Upstream 100 bases:
>100_bases TAAGGGAGATGTATCCGATTATACAGATAATATCATTAATTTTAGAAAAAATATTGATATCAGATAATGGATTTTTATTA TAGAGGAGATAATTTTCAGA
Downstream 100 bases:
>100_bases AATAAATGACAAATTATTTAATTACAAATTCGAGGATAAGCAGATGAATGTAAAGAAAATAATTACTCAATTTATTAAAT TTAGTATTGTTGGATATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MDKQKRTIYFDYLRVMATLAVIMLHMSAQNWYVSDVNGYNWQVFNLYDSIVRWGVPVFVMISGALFLKKELSLKVIYTKY IFRMAVSLVVWSAIYALFRYDEQQGRLINFISAPYHLWFIFMIIGLYMMIPILKKVVENMYTLRYFLFMSFIFVGCIPEL ITIIRDFCTNSTILNCLEIIEKNIKELNIAFGYSAYFVLGFYLSKIEFNKKQRKIIYILGCLGFIFTIVMDSFVALKNQQ YCSNYYNNFMINVMLESIAIFVFFKYRKFKNDNINKGISYIAQRCFGIYLVHVLLIKILKEQMEINTMTFNALISVPVIT ILVFSIGLILSIILNKIPYIKKYIM
Sequences:
>Translated_345_residues MDKQKRTIYFDYLRVMATLAVIMLHMSAQNWYVSDVNGYNWQVFNLYDSIVRWGVPVFVMISGALFLKKELSLKVIYTKY IFRMAVSLVVWSAIYALFRYDEQQGRLINFISAPYHLWFIFMIIGLYMMIPILKKVVENMYTLRYFLFMSFIFVGCIPEL ITIIRDFCTNSTILNCLEIIEKNIKELNIAFGYSAYFVLGFYLSKIEFNKKQRKIIYILGCLGFIFTIVMDSFVALKNQQ YCSNYYNNFMINVMLESIAIFVFFKYRKFKNDNINKGISYIAQRCFGIYLVHVLLIKILKEQMEINTMTFNALISVPVIT ILVFSIGLILSIILNKIPYIKKYIM >Mature_345_residues MDKQKRTIYFDYLRVMATLAVIMLHMSAQNWYVSDVNGYNWQVFNLYDSIVRWGVPVFVMISGALFLKKELSLKVIYTKY IFRMAVSLVVWSAIYALFRYDEQQGRLINFISAPYHLWFIFMIIGLYMMIPILKKVVENMYTLRYFLFMSFIFVGCIPEL ITIIRDFCTNSTILNCLEIIEKNIKELNIAFGYSAYFVLGFYLSKIEFNKKQRKIIYILGCLGFIFTIVMDSFVALKNQQ YCSNYYNNFMINVMLESIAIFVFFKYRKFKNDNINKGISYIAQRCFGIYLVHVLLIKILKEQMEINTMTFNALISVPVIT ILVFSIGLILSIILNKIPYIKKYIM
Specific function: Unknown
COG id: COG3274
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1789984, Length=310, Percent_Identity=25.8064516129032, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40767; Mature: 40767
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKQKRTIYFDYLRVMATLAVIMLHMSAQNWYVSDVNGYNWQVFNLYDSIVRWGVPVFVM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHCCCHHHHH ISGALFLKKELSLKVIYTKYIFRMAVSLVVWSAIYALFRYDEQQGRLINFISAPYHLWFI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH FMIIGLYMMIPILKKVVENMYTLRYFLFMSFIFVGCIPELITIIRDFCTNSTILNCLEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EKNIKELNIAFGYSAYFVLGFYLSKIEFNKKQRKIIYILGCLGFIFTIVMDSFVALKNQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YCSNYYNNFMINVMLESIAIFVFFKYRKFKNDNINKGISYIAQRCFGIYLVHVLLIKILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQMEINTMTFNALISVPVITILVFSIGLILSIILNKIPYIKKYIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDKQKRTIYFDYLRVMATLAVIMLHMSAQNWYVSDVNGYNWQVFNLYDSIVRWGVPVFVM CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEHHHHHHHHHCCCHHHHH ISGALFLKKELSLKVIYTKYIFRMAVSLVVWSAIYALFRYDEQQGRLINFISAPYHLWFI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH FMIIGLYMMIPILKKVVENMYTLRYFLFMSFIFVGCIPELITIIRDFCTNSTILNCLEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH EKNIKELNIAFGYSAYFVLGFYLSKIEFNKKQRKIIYILGCLGFIFTIVMDSFVALKNQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH YCSNYYNNFMINVMLESIAIFVFFKYRKFKNDNINKGISYIAQRCFGIYLVHVLLIKILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EQMEINTMTFNALISVPVITILVFSIGLILSIILNKIPYIKKYIM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]