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The map label for this gene is epsF [H]

Identifier: 238924974

GI number: 238924974

Start: 2504379

End: 2505521

Strand: Reverse

Name: epsF [H]

Synonym: EUBREC_2625

Alternate gene names: 238924974

Gene position: 2505521-2504379 (Counterclockwise)

Preceding gene: 238924975

Following gene: 238924973

Centisome position: 72.63

GC content: 33.16

Gene sequence:

>1143_bases
ATGCAAAGGAAAGTAATAATGTATAGAGTTTTAGTGTTTGGAATGACAGAAAATCCGGGTGGAGTGGAGAGTTTTTTGAT
GAATTATTATAGGAATATAGACAAATCAAAAATCCAGTTTGATTTTCTGTGTAATTCACATGCACCTGTTGCATATGAAG
ATGAACTTATAGGTATGGGAGCGAGAACATACCATATTACAGCGAGAAGTACAGATTATCGAAAGTATAAAGCAGAATTG
GAAGATCTGTTTAGAACTAAAAGTAAAGAATGGGATGCTATATGGGTCAATGTAAGCAGTCTTGCAAACATTGACTATCT
GAAAATGGCTAAGAAGTATGGGATTAGGAAAAGAATTATACACAGTCATAATTCAAGAAATATGGATAGCAAACTTAGAG
GATTTCTTCATAAAATAAATCGTCTGGTAATTAAAAAGTATGCGACCGATTTTTGGGCATGTGCACCGGATGCAGCTCAA
TGGTTTTATACAAATAAGTTGATGGAACAGGTAATAATAATCCACAATGCTATAGATGTGGAAAAATTTGCATATGATGA
AGAAAAGCGTAAGAAGTATAGAAAACAAATAGGATGTACCGATGAATATCTGATTGGAAATATTGGTAGATTCCATTTTC
AGAAAAATCAAATGTTTCTTTTGGATGTGTTTGCTGAGATATTAAAGATTGATTCTAAATGTGCACTTGTTCTTATTGGG
CAGGGGGAAGATGAAGAGAAGCTAAAAAAGAAGGCTGTAGATTTAAATATATCAGAAAAGGTTTATTTTGTTGGAATCCA
AAAAGATATTCCTGGATGGCTTAGTGCTATGGATTTATTTTTATTTCCATCGGTATTTGAAGGCTTAAGTGTAGTAGCGC
TTGAAGCTCAGGCAAACGGAGTTACGGTTTTGGCTTCTAAAGGTGTTATTACAGAAGAGTTGAGAATGAATGATAATTTT
ATGTTCTTTTCGCTTGATAAATCTCCTTATGATTGGGGAGTTGAGGCTTTGGCTATGAAACAATATGTCAGACCGGGTAA
CGAATATATAAAGCAGAATTTTAAACTAAAAGGCTATGATATTCAGAATGAAGTGAAAAAAATAGAAGACAGGTGGTTAA
AAGATGAAAAAACAATATATTAA

Upstream 100 bases:

>100_bases
TTCAAAGAATGCAGCTCGTTGAGGATGATTCCGATATTTTTAATAAAGATTAAGTGTTATAGATTGGCAGGAGTAGTATA
TTCAATAAGAGCAAAACAAA

Downstream 100 bases:

>100_bases
GGCTGTTGATGTAATAGCAGAGGTTTTGCGGAAATGGTATATACTTGTTATATGCGTTATTTTGATGGCAGTGGCAGTGC
CGAATTTTAAATATAATAAT

Product: Glycosyltransferase Family 4 candidate a-glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MQRKVIMYRVLVFGMTENPGGVESFLMNYYRNIDKSKIQFDFLCNSHAPVAYEDELIGMGARTYHITARSTDYRKYKAEL
EDLFRTKSKEWDAIWVNVSSLANIDYLKMAKKYGIRKRIIHSHNSRNMDSKLRGFLHKINRLVIKKYATDFWACAPDAAQ
WFYTNKLMEQVIIIHNAIDVEKFAYDEEKRKKYRKQIGCTDEYLIGNIGRFHFQKNQMFLLDVFAEILKIDSKCALVLIG
QGEDEEKLKKKAVDLNISEKVYFVGIQKDIPGWLSAMDLFLFPSVFEGLSVVALEAQANGVTVLASKGVITEELRMNDNF
MFFSLDKSPYDWGVEALAMKQYVRPGNEYIKQNFKLKGYDIQNEVKKIEDRWLKDEKTIY

Sequences:

>Translated_380_residues
MQRKVIMYRVLVFGMTENPGGVESFLMNYYRNIDKSKIQFDFLCNSHAPVAYEDELIGMGARTYHITARSTDYRKYKAEL
EDLFRTKSKEWDAIWVNVSSLANIDYLKMAKKYGIRKRIIHSHNSRNMDSKLRGFLHKINRLVIKKYATDFWACAPDAAQ
WFYTNKLMEQVIIIHNAIDVEKFAYDEEKRKKYRKQIGCTDEYLIGNIGRFHFQKNQMFLLDVFAEILKIDSKCALVLIG
QGEDEEKLKKKAVDLNISEKVYFVGIQKDIPGWLSAMDLFLFPSVFEGLSVVALEAQANGVTVLASKGVITEELRMNDNF
MFFSLDKSPYDWGVEALAMKQYVRPGNEYIKQNFKLKGYDIQNEVKKIEDRWLKDEKTIY
>Mature_380_residues
MQRKVIMYRVLVFGMTENPGGVESFLMNYYRNIDKSKIQFDFLCNSHAPVAYEDELIGMGARTYHITARSTDYRKYKAEL
EDLFRTKSKEWDAIWVNVSSLANIDYLKMAKKYGIRKRIIHSHNSRNMDSKLRGFLHKINRLVIKKYATDFWACAPDAAQ
WFYTNKLMEQVIIIHNAIDVEKFAYDEEKRKKYRKQIGCTDEYLIGNIGRFHFQKNQMFLLDVFAEILKIDSKCALVLIG
QGEDEEKLKKKAVDLNISEKVYFVGIQKDIPGWLSAMDLFLFPSVFEGLSVVALEAQANGVTVLASKGVITEELRMNDNF
MFFSLDKSPYDWGVEALAMKQYVRPGNEYIKQNFKLKGYDIQNEVKKIEDRWLKDEKTIY

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 44434; Mature: 44434

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRKVIMYRVLVFGMTENPGGVESFLMNYYRNIDKSKIQFDFLCNSHAPVAYEDELIGMG
CCCHHEEEEEEHEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCHHCCCC
ARTYHITARSTDYRKYKAELEDLFRTKSKEWDAIWVNVSSLANIDYLKMAKKYGIRKRII
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHCHHHHHH
HSHNSRNMDSKLRGFLHKINRLVIKKYATDFWACAPDAAQWFYTNKLMEQVIIIHNAIDV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH
EKFAYDEEKRKKYRKQIGCTDEYLIGNIGRFHFQKNQMFLLDVFAEILKIDSKCALVLIG
HHHHCCHHHHHHHHHHCCCCCHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
QGEDEEKLKKKAVDLNISEKVYFVGIQKDIPGWLSAMDLFLFPSVFEGLSVVALEAQANG
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
VTVLASKGVITEELRMNDNFMFFSLDKSPYDWGVEALAMKQYVRPGNEYIKQNFKLKGYD
EEEEEECCCEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEECCC
IQNEVKKIEDRWLKDEKTIY
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQRKVIMYRVLVFGMTENPGGVESFLMNYYRNIDKSKIQFDFLCNSHAPVAYEDELIGMG
CCCHHEEEEEEHEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCHHCCCC
ARTYHITARSTDYRKYKAELEDLFRTKSKEWDAIWVNVSSLANIDYLKMAKKYGIRKRII
CEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHCCCHHHHHHHHHCHHHHHH
HSHNSRNMDSKLRGFLHKINRLVIKKYATDFWACAPDAAQWFYTNKLMEQVIIIHNAIDV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCH
EKFAYDEEKRKKYRKQIGCTDEYLIGNIGRFHFQKNQMFLLDVFAEILKIDSKCALVLIG
HHHHCCHHHHHHHHHHCCCCCHHHHCCCHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEE
QGEDEEKLKKKAVDLNISEKVYFVGIQKDIPGWLSAMDLFLFPSVFEGLSVVALEAQANG
CCCCHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC
VTVLASKGVITEELRMNDNFMFFSLDKSPYDWGVEALAMKQYVRPGNEYIKQNFKLKGYD
EEEEEECCCEEHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEECCC
IQNEVKKIEDRWLKDEKTIY
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]