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The map label for this gene is lytR [H]

Identifier: 238924962

GI number: 238924962

Start: 2490131

End: 2491351

Strand: Reverse

Name: lytR [H]

Synonym: EUBREC_2613

Alternate gene names: 238924962

Gene position: 2491351-2490131 (Counterclockwise)

Preceding gene: 238924963

Following gene: 238924961

Centisome position: 72.22

GC content: 37.51

Gene sequence:

>1221_bases
ATGGCAAAGAAGAGAAAGAAAAAAAGAAACGGCAAAAAGAAGATAATACTATTTATATTTGAAATTTTACTGTTGCTGGT
CGTGCTTGGTATTGTCTGGTTATATAATAATACACTAGGACAGGTTAAGTATGAAGATGGACTCACAGACAGCCAGGCAG
GAATTAATGAAGATATTGATAAGGATGCACTGGAGAATATGCATGGATATTTGAATGTAGCATTGTTTGGTCTTGATAAT
AGAAGCGATGGCTCTTATAATGAGGGACATTCCGATTGTATCATGATTGCAAGCTTGAATTATGATACAAAGGAGGTTCA
GTTGGTATCTGTATATAGAGATACGTATCTTCCGGTTGGCAATGGAAAATATGCGAAGGCGAATGCAGCATATGCTAATG
GTGGGGCAAAGAGAGCAGTAGCTATGCTTAATTCAAATTTGGATTTGAATATTACGAAGTATGTTTGTGTTGATTGGAAA
GCTCTGGTAGATGCTATTGATGATCTAGGAGGACTAGATCTTGAGATAACACCACAAGAAGTCAAAGAAATTAATAAATG
TACAGTTGAAGTAGACCAAATGACAGGTAAGAATACACCAGATGTCACACAATCAGGTAAAGTTCACTTAGATGGAACTC
AGGCTACTGGATATGCACGAATAAGAAGTACATCAGGAGATGATTTCCTTAGGGCATCTCGTCAGAGAATTGTGCTTCAG
GCTATGCTTGACAAGGCTAAGCAGGCAGATTTAGGATCGCTCACAGAGATGTGCAAGGATATTATGAGTCAGATAAGTAC
AAACTTTACAGCAACCGAGATAATACAGTATGCTTCTTATGTTACAAAGTTTCATATGAAAGAGACAACAGGCTTCCCAT
TTGAGCTGACTACAATGAATTTGTCAACTACGGGCGATACCATTATTCCTATAGACCTGGCACAGAATGTTTCTGAGCTT
CATCAGTTCCTGTTTAATGAGACTGATTATCAGCCAACAGAGACAGTTCAGAATGTAAGCAACAAGATTGCAAAGAAGAC
GGGGGTTACTTCAAAAACTTCTGCATTTGATTTGACACAGTATAATAATACAGTTGGATCTGATGGTACAGAGGGAGCAA
AAAAGAAGAATAAAGCGAAACAGGAAGAATTAAAGAAGAGCCAGTCAGAGTCTGAAAATAGTTCAGGAAAAAAATCATCA
TCTGATGATTCAGATGAATAA

Upstream 100 bases:

>100_bases
ACGAATCTGGAGTTTGGAAAGTATACCAATATGTCAGAGAAGGAGCGTCAGGATTACGCAGACGCGTGGCTTTACATTCA
TAGGAAAAAGGAAAAATAAC

Downstream 100 bases:

>100_bases
ATGCTTAAATACAGCTATTAGGGAGAATTTATGAAAACAGAAATCAAAGAAAAAATCACGGCAACAAACCAGAAATACTT
AAAGAAATTCTTAACAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MAKKRKKKRNGKKKIILFIFEILLLLVVLGIVWLYNNTLGQVKYEDGLTDSQAGINEDIDKDALENMHGYLNVALFGLDN
RSDGSYNEGHSDCIMIASLNYDTKEVQLVSVYRDTYLPVGNGKYAKANAAYANGGAKRAVAMLNSNLDLNITKYVCVDWK
ALVDAIDDLGGLDLEITPQEVKEINKCTVEVDQMTGKNTPDVTQSGKVHLDGTQATGYARIRSTSGDDFLRASRQRIVLQ
AMLDKAKQADLGSLTEMCKDIMSQISTNFTATEIIQYASYVTKFHMKETTGFPFELTTMNLSTTGDTIIPIDLAQNVSEL
HQFLFNETDYQPTETVQNVSNKIAKKTGVTSKTSAFDLTQYNNTVGSDGTEGAKKKNKAKQEELKKSQSESENSSGKKSS
SDDSDE

Sequences:

>Translated_406_residues
MAKKRKKKRNGKKKIILFIFEILLLLVVLGIVWLYNNTLGQVKYEDGLTDSQAGINEDIDKDALENMHGYLNVALFGLDN
RSDGSYNEGHSDCIMIASLNYDTKEVQLVSVYRDTYLPVGNGKYAKANAAYANGGAKRAVAMLNSNLDLNITKYVCVDWK
ALVDAIDDLGGLDLEITPQEVKEINKCTVEVDQMTGKNTPDVTQSGKVHLDGTQATGYARIRSTSGDDFLRASRQRIVLQ
AMLDKAKQADLGSLTEMCKDIMSQISTNFTATEIIQYASYVTKFHMKETTGFPFELTTMNLSTTGDTIIPIDLAQNVSEL
HQFLFNETDYQPTETVQNVSNKIAKKTGVTSKTSAFDLTQYNNTVGSDGTEGAKKKNKAKQEELKKSQSESENSSGKKSS
SDDSDE
>Mature_405_residues
AKKRKKKRNGKKKIILFIFEILLLLVVLGIVWLYNNTLGQVKYEDGLTDSQAGINEDIDKDALENMHGYLNVALFGLDNR
SDGSYNEGHSDCIMIASLNYDTKEVQLVSVYRDTYLPVGNGKYAKANAAYANGGAKRAVAMLNSNLDLNITKYVCVDWKA
LVDAIDDLGGLDLEITPQEVKEINKCTVEVDQMTGKNTPDVTQSGKVHLDGTQATGYARIRSTSGDDFLRASRQRIVLQA
MLDKAKQADLGSLTEMCKDIMSQISTNFTATEIIQYASYVTKFHMKETTGFPFELTTMNLSTTGDTIIPIDLAQNVSELH
QFLFNETDYQPTETVQNVSNKIAKKTGVTSKTSAFDLTQYNNTVGSDGTEGAKKKNKAKQEELKKSQSESENSSGKKSSS
DDSDE

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 44843; Mature: 44712

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRKKKRNGKKKIILFIFEILLLLVVLGIVWLYNNTLGQVKYEDGLTDSQAGINEDID
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC
KDALENMHGYLNVALFGLDNRSDGSYNEGHSDCIMIASLNYDTKEVQLVSVYRDTYLPVG
HHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEEEHHHHEEECC
NGKYAKANAAYANGGAKRAVAMLNSNLDLNITKYVCVDWKALVDAIDDLGGLDLEITPQE
CCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCEEECHHH
VKEINKCTVEVDQMTGKNTPDVTQSGKVHLDGTQATGYARIRSTSGDDFLRASRQRIVLQ
HHHHHHHEEEEHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AMLDKAKQADLGSLTEMCKDIMSQISTNFTATEIIQYASYVTKFHMKETTGFPFELTTMN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LSTTGDTIIPIDLAQNVSELHQFLFNETDYQPTETVQNVSNKIAKKTGVTSKTSAFDLTQ
EECCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
YNNTVGSDGTEGAKKKNKAKQEELKKSQSESENSSGKKSSSDDSDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKKRKKKRNGKKKIILFIFEILLLLVVLGIVWLYNNTLGQVKYEDGLTDSQAGINEDID
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCC
KDALENMHGYLNVALFGLDNRSDGSYNEGHSDCIMIASLNYDTKEVQLVSVYRDTYLPVG
HHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHHEEEEEEHHHHEEECC
NGKYAKANAAYANGGAKRAVAMLNSNLDLNITKYVCVDWKALVDAIDDLGGLDLEITPQE
CCCCEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCEEECHHH
VKEINKCTVEVDQMTGKNTPDVTQSGKVHLDGTQATGYARIRSTSGDDFLRASRQRIVLQ
HHHHHHHEEEEHHHCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHH
AMLDKAKQADLGSLTEMCKDIMSQISTNFTATEIIQYASYVTKFHMKETTGFPFELTTMN
HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LSTTGDTIIPIDLAQNVSELHQFLFNETDYQPTETVQNVSNKIAKKTGVTSKTSAFDLTQ
EECCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEHHH
YNNTVGSDGTEGAKKKNKAKQEELKKSQSESENSSGKKSSSDDSDE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA