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The map label for this gene is yidK [H]

Identifier: 238924942

GI number: 238924942

Start: 2467100

End: 2468878

Strand: Reverse

Name: yidK [H]

Synonym: EUBREC_2593

Alternate gene names: 238924942

Gene position: 2468878-2467100 (Counterclockwise)

Preceding gene: 238924943

Following gene: 238924941

Centisome position: 71.57

GC content: 38.11

Gene sequence:

>1779_bases
ATGTATATTTTTTCTATTAAATTGGAGGATTTTATGGAGCATTTAGTATTTACTTTGGTGACATTTGTGCTTTTCACAGC
ACTGGTTGGAATTATTTCAGGAAAGATAGTGAAGAATAGCGATGACCAGAAAACGGCAAAGGGTTATTTCCTTGCCGGAA
ATGGACTTGGAGGTTTTTTCATTGCAGGCTCAATGCTGCTTACGAATCTGTCGGCAGAAAATCTGGTAGGTTTGTCGGGA
CAGTCATATGCAGCTAATATGTCAGGCATGGCATGGGAAGCAACAGCGGTTATAGCCACAATTATTATGGCTTTTGTGTT
TTTGCCGATGTATCTTAGAAAAGGATATACAACGCTGCCGGAGTTTATGGAGGAGAGGTATGGCGTTGGTGTACGCCGTA
TGGTTTCTATCCTATTTCTTATTGGATATTTAGTAATCGGAATTCCTGTATGTCTGTACGCAGGCGCTATAGCATTTGAG
CAGATTTTTGATTTTGCTACAGTATTTGGAATCAGCGAGGGTATGGCACTTACAATTCTTATAGTGCTTGTAGGTATTAT
TGGTGCACTATATGCCGTACTTGGAGGTATGAGAGCAGTAGCTGTATCAGACACAATCAATGGAATTTTACTTGTTTTAG
GCTCAGTGCTTGTAGTCGTATTTGGTTTTATAGCTGTTGGAAAATTAAGCGGAGGTGGATTTATTGTCGGTGTGAAGGAT
GTTATTACATATGAACCGGCAAAGCTCAATGCGATTGGTGGAAAGAATGATCCTGTACCATTTGCATGTATTTTTACAGG
TATGCTGCTTGCAAATCTGTTTTACTGGGGTACTAACCAAGTACTTATTCAGAGAGCACTTGGTGCTGAAAACTTAAAGG
AAGGACAAAAGGGAGTTTTACTTTCAGGCTTTTTAAAGATGATGGTACCGTTACTTCTTGTTATTCCCGGAGTAATCGCA
GCAAGACTTGTACCAGGTCTTACAAGCAAGGATTTTGCATATCCTTCACTTGTAGCTAGGTCATTGCCATGGCCGGTTGT
AGGACTGTTTTGTGCAGCATTGTTTGGATCAATTATCTCAACTTATAATTCATTTCTCAATGCAGCTAGTACCGTATTTA
TGATTGATATTTATAAGCCGATTTTTAACCCAAATCTCTCAGAGGAAGCTACAGTAAAACTTGCAAAGAAAATTGGATGG
GGCTTTGCAGCATTTGCCATTATCTTTACACCATTCCTTGATGTGCTTAGCACAGGACTTTATGATTTCGGACGAAGCTT
TACAGGTTTTTATAATATTCCTATCATTACAATGGTGCTTGTAGGAATGTTCTCAAAGAAGGGCTCTAAGCTTGGAGCAA
TATGTGCAACAATATTCCATATTGCATTTTACGCATGCTACAAGTTTATCTTCCCACATATTGATACACCATTCACAAAT
GCTGTTAGTGGAATTAATTATATGTATATATACGCTATCTCATTTGTTATCATGCTTGTAATCATCTTTGTATGCAGCAA
GATTGCACCAAATACAAAGGTATTTGACAAGAGTGCTTCAAGAAATGATGGCTATGATATGACAGCATGGAAGCATAAAA
ATGCTTTTGCAATCTGGCTTGTTTCATTCCTGGTATATGAGTATTTCATTTTCTCGCCTGCAGGAATTGCAACAGAGAAC
AAAAATGTAGTAAGAATTGCTATTGTAACAGCAATATTTGTGATTGAGACAATTGTTCTGATTGTGAAAGAGATGAACAA
GCGTAAAAAGACAGCTTAG

Upstream 100 bases:

>100_bases
ACTGGACATATTACTGTACTTTCGGTTGCGTGGGAAATAATTTTCAGAAAAAGTATATCATGTGAGAGATTGAATGTGAA
TAGTTAGTTTCAACAAATCG

Downstream 100 bases:

>100_bases
GGAGGTTATTAAATGCAGATTAAAGTAAATGATAATGAATTTCAGCTTTTTGTGGGAGAAAAAAGGATTCTGGAGCATAG
CAAAGAAAGACCGATGATTT

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MYIFSIKLEDFMEHLVFTLVTFVLFTALVGIISGKIVKNSDDQKTAKGYFLAGNGLGGFFIAGSMLLTNLSAENLVGLSG
QSYAANMSGMAWEATAVIATIIMAFVFLPMYLRKGYTTLPEFMEERYGVGVRRMVSILFLIGYLVIGIPVCLYAGAIAFE
QIFDFATVFGISEGMALTILIVLVGIIGALYAVLGGMRAVAVSDTINGILLVLGSVLVVVFGFIAVGKLSGGGFIVGVKD
VITYEPAKLNAIGGKNDPVPFACIFTGMLLANLFYWGTNQVLIQRALGAENLKEGQKGVLLSGFLKMMVPLLLVIPGVIA
ARLVPGLTSKDFAYPSLVARSLPWPVVGLFCAALFGSIISTYNSFLNAASTVFMIDIYKPIFNPNLSEEATVKLAKKIGW
GFAAFAIIFTPFLDVLSTGLYDFGRSFTGFYNIPIITMVLVGMFSKKGSKLGAICATIFHIAFYACYKFIFPHIDTPFTN
AVSGINYMYIYAISFVIMLVIIFVCSKIAPNTKVFDKSASRNDGYDMTAWKHKNAFAIWLVSFLVYEYFIFSPAGIATEN
KNVVRIAIVTAIFVIETIVLIVKEMNKRKKTA

Sequences:

>Translated_592_residues
MYIFSIKLEDFMEHLVFTLVTFVLFTALVGIISGKIVKNSDDQKTAKGYFLAGNGLGGFFIAGSMLLTNLSAENLVGLSG
QSYAANMSGMAWEATAVIATIIMAFVFLPMYLRKGYTTLPEFMEERYGVGVRRMVSILFLIGYLVIGIPVCLYAGAIAFE
QIFDFATVFGISEGMALTILIVLVGIIGALYAVLGGMRAVAVSDTINGILLVLGSVLVVVFGFIAVGKLSGGGFIVGVKD
VITYEPAKLNAIGGKNDPVPFACIFTGMLLANLFYWGTNQVLIQRALGAENLKEGQKGVLLSGFLKMMVPLLLVIPGVIA
ARLVPGLTSKDFAYPSLVARSLPWPVVGLFCAALFGSIISTYNSFLNAASTVFMIDIYKPIFNPNLSEEATVKLAKKIGW
GFAAFAIIFTPFLDVLSTGLYDFGRSFTGFYNIPIITMVLVGMFSKKGSKLGAICATIFHIAFYACYKFIFPHIDTPFTN
AVSGINYMYIYAISFVIMLVIIFVCSKIAPNTKVFDKSASRNDGYDMTAWKHKNAFAIWLVSFLVYEYFIFSPAGIATEN
KNVVRIAIVTAIFVIETIVLIVKEMNKRKKTA
>Mature_592_residues
MYIFSIKLEDFMEHLVFTLVTFVLFTALVGIISGKIVKNSDDQKTAKGYFLAGNGLGGFFIAGSMLLTNLSAENLVGLSG
QSYAANMSGMAWEATAVIATIIMAFVFLPMYLRKGYTTLPEFMEERYGVGVRRMVSILFLIGYLVIGIPVCLYAGAIAFE
QIFDFATVFGISEGMALTILIVLVGIIGALYAVLGGMRAVAVSDTINGILLVLGSVLVVVFGFIAVGKLSGGGFIVGVKD
VITYEPAKLNAIGGKNDPVPFACIFTGMLLANLFYWGTNQVLIQRALGAENLKEGQKGVLLSGFLKMMVPLLLVIPGVIA
ARLVPGLTSKDFAYPSLVARSLPWPVVGLFCAALFGSIISTYNSFLNAASTVFMIDIYKPIFNPNLSEEATVKLAKKIGW
GFAAFAIIFTPFLDVLSTGLYDFGRSFTGFYNIPIITMVLVGMFSKKGSKLGAICATIFHIAFYACYKFIFPHIDTPFTN
AVSGINYMYIYAISFVIMLVIIFVCSKIAPNTKVFDKSASRNDGYDMTAWKHKNAFAIWLVSFLVYEYFIFSPAGIATEN
KNVVRIAIVTAIFVIETIVLIVKEMNKRKKTA

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=527, Percent_Identity=26.5654648956357, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI110835708, Length=545, Percent_Identity=25.5045871559633, Blast_Score=176, Evalue=7e-44,
Organism=Homo sapiens, GI4507031, Length=541, Percent_Identity=26.2476894639556, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI14140236, Length=450, Percent_Identity=26, Blast_Score=158, Evalue=2e-38,
Organism=Homo sapiens, GI4507033, Length=450, Percent_Identity=24, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI206597483, Length=519, Percent_Identity=25.4335260115607, Blast_Score=139, Evalue=7e-33,
Organism=Homo sapiens, GI109659836, Length=443, Percent_Identity=25.5079006772009, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI206597487, Length=546, Percent_Identity=23.8095238095238, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI109659839, Length=459, Percent_Identity=24.8366013071895, Blast_Score=129, Evalue=1e-29,
Organism=Homo sapiens, GI256985183, Length=437, Percent_Identity=24.2562929061785, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI4507035, Length=423, Percent_Identity=22.9314420803783, Blast_Score=80, Evalue=7e-15,
Organism=Homo sapiens, GI157671931, Length=413, Percent_Identity=24.2130750605327, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI167466278, Length=384, Percent_Identity=22.9166666666667, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI1790113, Length=520, Percent_Identity=41.7307692307692, Blast_Score=394, Evalue=1e-110,
Organism=Escherichia coli, GI87082237, Length=352, Percent_Identity=25.2840909090909, Blast_Score=76, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI115533094, Length=405, Percent_Identity=20.4938271604938, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI32566512, Length=306, Percent_Identity=26.797385620915, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI28573698, Length=378, Percent_Identity=27.2486772486773, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI221459584, Length=449, Percent_Identity=25.6124721603563, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221459588, Length=493, Percent_Identity=23.3265720081136, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24641117, Length=456, Percent_Identity=23.2456140350877, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI221459586, Length=496, Percent_Identity=22.3790322580645, Blast_Score=88, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24650192, Length=428, Percent_Identity=24.7663551401869, Blast_Score=86, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24651739, Length=389, Percent_Identity=23.6503856041131, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI161076631, Length=386, Percent_Identity=24.3523316062176, Blast_Score=82, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24645928, Length=405, Percent_Identity=24.9382716049383, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24651741, Length=387, Percent_Identity=21.9638242894057, Blast_Score=76, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24640370, Length=406, Percent_Identity=22.9064039408867, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281362918, Length=308, Percent_Identity=21.4285714285714, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI28574994, Length=381, Percent_Identity=22.3097112860892, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 64408; Mature: 64408

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIFSIKLEDFMEHLVFTLVTFVLFTALVGIISGKIVKNSDDQKTAKGYFLAGNGLGGFF
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCCHHH
IAGSMLLTNLSAENLVGLSGQSYAANMSGMAWEATAVIATIIMAFVFLPMYLRKGYTTLP
HHHHHHHHHCCHHHEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EFMEERYGVGVRRMVSILFLIGYLVIGIPVCLYAGAIAFEQIFDFATVFGISEGMALTIL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVLVGIIGALYAVLGGMRAVAVSDTINGILLVLGSVLVVVFGFIAVGKLSGGGFIVGVKD
HHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH
VITYEPAKLNAIGGKNDPVPFACIFTGMLLANLFYWGTNQVLIQRALGAENLKEGQKGVL
HHEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCCCCCCHH
LSGFLKMMVPLLLVIPGVIAARLVPGLTSKDFAYPSLVARSLPWPVVGLFCAALFGSIIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
TYNSFLNAASTVFMIDIYKPIFNPNLSEEATVKLAKKIGWGFAAFAIIFTPFLDVLSTGL
HHHHHHHHHHHHEEEEHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YDFGRSFTGFYNIPIITMVLVGMFSKKGSKLGAICATIFHIAFYACYKFIFPHIDTPFTN
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AVSGINYMYIYAISFVIMLVIIFVCSKIAPNTKVFDKSASRNDGYDMTAWKHKNAFAIWL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEECCCCHHHHHH
VSFLVYEYFIFSPAGIATENKNVVRIAIVTAIFVIETIVLIVKEMNKRKKTA
HHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYIFSIKLEDFMEHLVFTLVTFVLFTALVGIISGKIVKNSDDQKTAKGYFLAGNGLGGFF
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCEEEECCCCCHHH
IAGSMLLTNLSAENLVGLSGQSYAANMSGMAWEATAVIATIIMAFVFLPMYLRKGYTTLP
HHHHHHHHHCCHHHEECCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EFMEERYGVGVRRMVSILFLIGYLVIGIPVCLYAGAIAFEQIFDFATVFGISEGMALTIL
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
IVLVGIIGALYAVLGGMRAVAVSDTINGILLVLGSVLVVVFGFIAVGKLSGGGFIVGVKD
HHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHH
VITYEPAKLNAIGGKNDPVPFACIFTGMLLANLFYWGTNQVLIQRALGAENLKEGQKGVL
HHEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHCCCCCCHH
LSGFLKMMVPLLLVIPGVIAARLVPGLTSKDFAYPSLVARSLPWPVVGLFCAALFGSIIS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
TYNSFLNAASTVFMIDIYKPIFNPNLSEEATVKLAKKIGWGFAAFAIIFTPFLDVLSTGL
HHHHHHHHHHHHEEEEHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
YDFGRSFTGFYNIPIITMVLVGMFSKKGSKLGAICATIFHIAFYACYKFIFPHIDTPFTN
HHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AVSGINYMYIYAISFVIMLVIIFVCSKIAPNTKVFDKSASRNDGYDMTAWKHKNAFAIWL
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCEECCCCHHHHHH
VSFLVYEYFIFSPAGIATENKNVVRIAIVTAIFVIETIVLIVKEMNKRKKTA
HHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]