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The map label for this gene is panD

Identifier: 238924848

GI number: 238924848

Start: 2364279

End: 2364674

Strand: Reverse

Name: panD

Synonym: EUBREC_2499

Alternate gene names: 238924848

Gene position: 2364674-2364279 (Counterclockwise)

Preceding gene: 238924849

Following gene: 238924847

Centisome position: 68.55

GC content: 47.73

Gene sequence:

>396_bases
ATGAATTATACAATGCTTAAGGGCAAAATACACAGAGCGGTGGTCAAGCAGGCTGACTTAAACTACGTGGGAAGCATCAC
TGTAGATACAAAGCTGCTTGAGGCAGCAGGCATCTTGGAGTATGAGATGGTACAGATTGTCGATGTGGAAAACGGAAACA
GATTCGAGACCTACACCATCGCCGGAGAGCCGGGCTCAGGCATGATATGCTTAAACGGCGCAGCCGCCAGACAGGTTGCA
GTCGGTGACCATGTGATACTCATGTGCTATGCGCAGATGACACCGGAGGAAGCAAAGGAGCATCATCCGAAGGTTGTGTT
TGTGGATGATGAAAACAAGATAGCGCGTGTGACAAATTATGAGAAGCATGGAAAGCTGACGGAGGATTTTATTTAA

Upstream 100 bases:

>100_bases
ACACTCGTGGCAATTGCTGTCTATATCGGAAAGACAAGGCTGATTGACAATTTTATTGCGTAGACGGACAAGAAACGATT
ATTGAAAAGAGGTACAAACA

Downstream 100 bases:

>100_bases
CAATAGAAAAATCAAGTCTGCTGTAGTATAATAATTTATCGGGTAAAATATCATGTATTTATGCGGGAGGTAAATATGTA
CACAGCAGACGAAAAGAGAT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MNYTMLKGKIHRAVVKQADLNYVGSITVDTKLLEAAGILEYEMVQIVDVENGNRFETYTIAGEPGSGMICLNGAAARQVA
VGDHVILMCYAQMTPEEAKEHHPKVVFVDDENKIARVTNYEKHGKLTEDFI

Sequences:

>Translated_131_residues
MNYTMLKGKIHRAVVKQADLNYVGSITVDTKLLEAAGILEYEMVQIVDVENGNRFETYTIAGEPGSGMICLNGAAARQVA
VGDHVILMCYAQMTPEEAKEHHPKVVFVDDENKIARVTNYEKHGKLTEDFI
>Mature_131_residues
MNYTMLKGKIHRAVVKQADLNYVGSITVDTKLLEAAGILEYEMVQIVDVENGNRFETYTIAGEPGSGMICLNGAAARQVA
VGDHVILMCYAQMTPEEAKEHHPKVVFVDDENKIARVTNYEKHGKLTEDFI

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=116, Percent_Identity=48.2758620689655, Blast_Score=111, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_EUBR3 (C4ZG24)

Other databases:

- EMBL:   CP001107
- RefSeq:   YP_002938364.1
- GeneID:   7966524
- GenomeReviews:   CP001107_GR
- KEGG:   ere:EUBREC_2499
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14572; Mature: 14572

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYTMLKGKIHRAVVKQADLNYVGSITVDTKLLEAAGILEYEMVQIVDVENGNRFETYTI
CCEEEEHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCCEEEEEEE
AGEPGSGMICLNGAAARQVAVGDHVILMCYAQMTPEEAKEHHPKVVFVDDENKIARVTNY
ECCCCCCEEEECCCCCCEEECCCEEEEEEEECCCHHHHHHCCCEEEEEECCCCEEEECCC
EKHGKLTEDFI
HHCCCCCCCCC
>Mature Secondary Structure
MNYTMLKGKIHRAVVKQADLNYVGSITVDTKLLEAAGILEYEMVQIVDVENGNRFETYTI
CCEEEEHHHHHHHHHHHCCCCEEEEEEECHHHHHHCCCCEEEEEEEEECCCCCEEEEEEE
AGEPGSGMICLNGAAARQVAVGDHVILMCYAQMTPEEAKEHHPKVVFVDDENKIARVTNY
ECCCCCCEEEECCCCCCEEECCCEEEEEEEECCCHHHHHHCCCEEEEEECCCCEEEECCC
EKHGKLTEDFI
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA