Click here to switch to the map view.

The map label for this gene is 238924839

Identifier: 238924839

GI number: 238924839

Start: 2354950

End: 2355981

Strand: Reverse

Name: 238924839

Synonym: EUBREC_2490

Alternate gene names: NA

Gene position: 2355981-2354950 (Counterclockwise)

Preceding gene: 238924840

Following gene: 238924838

Centisome position: 68.3

GC content: 34.69

Gene sequence:

>1032_bases
ATGAAGAAATTATTGAATACATTGTATGTTACATCGGAAAATAGTTATCTGGGGTTGGATGGAGAAAATGTTGTTGTATA
TGATGATAAAAATGAAATAGGCAGATTACCTTTACACAATCTCGAAGCAATAATTTCATTTGGATATAGAGGAACAAGTC
CGGCATTAATGGGAGCTTGTGCGGATAGAAATATTTCTCTTTGTTATCTGACACCACAGGGAAAATTTCTTGCAAGAGTT
TCAGGCAAAGTTAAGGGGAATGTCGTGCTAAGGAAACAACAATTCCAAAGCAGTAGTGAAGATATAAAGTGCCTGGAAAT
CGCAAAAAACTGTATTCTTGGAAAAGTGTATAATTCAAGATGGGTTCTAGAAAGAGCAATTAGAGATCATTCAATGCAGA
TAGATGTGGATAAGGTAAAAAAAGCATCTATAAAACTGAAAGAATTTCTTGATTATATCCAAAATTCACAGTCTATGAAT
CAGTTAAGAGGATATGAAGGTGAAGCAGCAAGTATATATTTTGGCGTATTTGATGAGTTGATTTTACAACAAAAGAAAGA
TTTTTTCTTTCAAGGGAGAAATCGGCGTCCGCCTCTTGATAATGTAAATGCAATGTTGTCGTTTACGTATACATTGCTTA
CAACTCAAATTACATCAGCGCTAGAGGTTGTAGGGTTAGATCCCTATGTTGGTTACATGCACACGGAACGTCCCGGTAGA
GTATCACTTTCATTAGATCTTATAGAAGAATTGCGAGCAGTCATGGCTGATAGATTTGTTTTATCATTGATTAATAAAAA
GATTGTAAATGGCAAGAGTTTTACAAAAAAAGAAAACGGTGCTGTATTGATGGATACAGATATTCGTAAAAAATTACTAT
CAGAATGGCAAAACAAGAAAAAGGAGATTATTACACACCCATATCTTAATGAAAAGGTGGAATGGGGAATGGTTCCATTT
GTACAGGCAATGCTGTTGGCAAGATATTTAAGGGGAGATTTGGATGAGTACCCTGTATTTTTATGGAAATGA

Upstream 100 bases:

>100_bases
AAAGGTGTGTATCTTGCTCTTTAAAAGATATTTGTATGCCAAAGATTGATAAAAGTGGTTCGGTGAAATCGTATATCAAT
AAGATGCTGGGGGAAACGTT

Downstream 100 bases:

>100_bases
GGTGATGGCGTGCTTGTATTGATTACATATGATGTGAATACTGAAACTGCTGAAGGAAAAACCAGGTTGAGAAAAGTAGC
TAAACAATGTGTAAATTATG

Product: DNA polymerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKLLNTLYVTSENSYLGLDGENVVVYDDKNEIGRLPLHNLEAIISFGYRGTSPALMGACADRNISLCYLTPQGKFLARV
SGKVKGNVVLRKQQFQSSSEDIKCLEIAKNCILGKVYNSRWVLERAIRDHSMQIDVDKVKKASIKLKEFLDYIQNSQSMN
QLRGYEGEAASIYFGVFDELILQQKKDFFFQGRNRRPPLDNVNAMLSFTYTLLTTQITSALEVVGLDPYVGYMHTERPGR
VSLSLDLIEELRAVMADRFVLSLINKKIVNGKSFTKKENGAVLMDTDIRKKLLSEWQNKKKEIITHPYLNEKVEWGMVPF
VQAMLLARYLRGDLDEYPVFLWK

Sequences:

>Translated_343_residues
MKKLLNTLYVTSENSYLGLDGENVVVYDDKNEIGRLPLHNLEAIISFGYRGTSPALMGACADRNISLCYLTPQGKFLARV
SGKVKGNVVLRKQQFQSSSEDIKCLEIAKNCILGKVYNSRWVLERAIRDHSMQIDVDKVKKASIKLKEFLDYIQNSQSMN
QLRGYEGEAASIYFGVFDELILQQKKDFFFQGRNRRPPLDNVNAMLSFTYTLLTTQITSALEVVGLDPYVGYMHTERPGR
VSLSLDLIEELRAVMADRFVLSLINKKIVNGKSFTKKENGAVLMDTDIRKKLLSEWQNKKKEIITHPYLNEKVEWGMVPF
VQAMLLARYLRGDLDEYPVFLWK
>Mature_343_residues
MKKLLNTLYVTSENSYLGLDGENVVVYDDKNEIGRLPLHNLEAIISFGYRGTSPALMGACADRNISLCYLTPQGKFLARV
SGKVKGNVVLRKQQFQSSSEDIKCLEIAKNCILGKVYNSRWVLERAIRDHSMQIDVDKVKKASIKLKEFLDYIQNSQSMN
QLRGYEGEAASIYFGVFDELILQQKKDFFFQGRNRRPPLDNVNAMLSFTYTLLTTQITSALEVVGLDPYVGYMHTERPGR
VSLSLDLIEELRAVMADRFVLSLINKKIVNGKSFTKKENGAVLMDTDIRKKLLSEWQNKKKEIITHPYLNEKVEWGMVPF
VQAMLLARYLRGDLDEYPVFLWK

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019858 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 39290; Mature: 39290

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLNTLYVTSENSYLGLDGENVVVYDDKNEIGRLPLHNLEAIISFGYRGTSPALMGAC
CHHHHHEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
ADRNISLCYLTPQGKFLARVSGKVKGNVVLRKQQFQSSSEDIKCLEIAKNCILGKVYNSR
CCCCEEEEEECCCCCEEEEECCCEECCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCHH
WVLERAIRDHSMQIDVDKVKKASIKLKEFLDYIQNSQSMNQLRGYEGEAASIYFGVFDEL
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHHHHH
ILQQKKDFFFQGRNRRPPLDNVNAMLSFTYTLLTTQITSALEVVGLDPYVGYMHTERPGR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCE
VSLSLDLIEELRAVMADRFVLSLINKKIVNGKSFTKKENGAVLMDTDIRKKLLSEWQNKK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH
KEIITHPYLNEKVEWGMVPFVQAMLLARYLRGDLDEYPVFLWK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MKKLLNTLYVTSENSYLGLDGENVVVYDDKNEIGRLPLHNLEAIISFGYRGTSPALMGAC
CHHHHHEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHH
ADRNISLCYLTPQGKFLARVSGKVKGNVVLRKQQFQSSSEDIKCLEIAKNCILGKVYNSR
CCCCEEEEEECCCCCEEEEECCCEECCEEEEHHHHCCCCCCHHHHHHHHHHHHHHHHCHH
WVLERAIRDHSMQIDVDKVKKASIKLKEFLDYIQNSQSMNQLRGYEGEAASIYFGVFDEL
HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEHHHHHHHH
ILQQKKDFFFQGRNRRPPLDNVNAMLSFTYTLLTTQITSALEVVGLDPYVGYMHTERPGR
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCE
VSLSLDLIEELRAVMADRFVLSLINKKIVNGKSFTKKENGAVLMDTDIRKKLLSEWQNKK
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHH
KEIITHPYLNEKVEWGMVPFVQAMLLARYLRGDLDEYPVFLWK
HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]