| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238924821
Identifier: 238924821
GI number: 238924821
Start: 2339573
End: 2341279
Strand: Reverse
Name: 238924821
Synonym: EUBREC_2472
Alternate gene names: NA
Gene position: 2341279-2339573 (Counterclockwise)
Preceding gene: 238924822
Following gene: 238924820
Centisome position: 67.87
GC content: 46.1
Gene sequence:
>1707_bases ATGAAGATAGAAAACAAAAAAATCCTACACACGGACATCCTCATAATAGGAGGTGGCACGGCTGGCTGTTATGCAGCGCT CACCATCCGTGAGAAATCGGATTATTCGATTATAATTGCAGAGAAAGCGAACATAAAGCGAAGCGGATGCCTTGCAGCAG GTGTCAATGCGATAAATGCATACATAGTAAAGGGCAGAAAGCCTGAGGACTATGTAGACTACGCAAAAAAGGATGCTGAC GGCATAGTAAGGGAAGACTTACTCATGACTATGTCCGAGGGCTTAAACCGTGTGACGGACAAGATGGAAAAGCTTGGACT TGTCATATTAAAGGATGAAAACGGTGAGTATGTAGCAAGAGGAAACCGAAATATCAAAATAAATGGCGAGAACATGAAGC CGATTTTGGCAGAAGCTGTATCAAAGATTACGGACTGTACAGTGATAAACAGAATCAATATCACGGACTATATAGTTGAG AACAACACCATAAAGGGTGCATACGGATTTTCAATCGAGGATGCTACAGCCTATGAAATCAGGGCTAAAAAGGTGCTCTG TGCAACAGGCGGAGCGGCCGGTTTATACAGGCCAAACAATCCGGGATTTTCAAGGCACAAGATGTGGTATCCGCCATTTA ATACAGGCGCCGGATATGCGATGGGCATAAGAAGCGGAGCAGAGATGACCACCTTTGAGATGAGATTTATCGCACTCAGA TGCAAGGACACAATCGCACCGACAGGAACAATTGCACAGGGAGTCGGGGCAAAGCAGGTCAATTCACTTGGAGAGGTTTA CGAGACAAAATACGGCCTTACCACATCAGAGCGTGTATACGGAACGGTCATGGAAAATCTCGAGGGAAGAGGTCCTTGCT ACTTAAGGACAGAGGGCATTTCGCCACAGCAGGATGAGTCATTAAGAAAGGCATATCTCAACATGGCACCAAGCCAGACA CTCAAGTGGGTGGAGGCAGGTAAGAATCCAAGTGAGCAGAATGTGGAGATAGAGGGCACTGAGCCGTATATCGTAGGTGG CCACACAGCGAGCGGCTACTGGGTAAATACCGAGCGTGAGACTACAATCCACGGACTTTATGCTGCTGGAGATGTGGCAG GAGGATGTCCACAGAAATATGTTACAGGAGCTATGGTAGAGGGCGAAATCGCTGCGATAGATATGGTTTCAAAGCTAGAT GCAGATACCTCCGACGGAAGTCCTGACACATCGGCATTTGATGAGAAAAAGGCGCTTGAAGCAAAAGCTTCAGAGTACGA CCATTTCCTCACTGAAAGGTTCAAGATGTTTACAACAGAGGCTATCGAGGAAGCCATGCAGAAGGTCATGGACAACTACG CAGGCGGTATTTCCACACATTATCAGTTCAACGGCAAGCAGCTTGCGCTGGCAAAGGAAAAGATAAATCATCTGATAGAG CTGACCGGTGATTTATATGCATCGGATATGCATGAGCTTATGTTCATATATGAGCTTAAGGAGAGGCTTACGGTATGTCT TTCGGTTATAGCACATCTTGGTGCAAGAAAGGAGACCAGATGGCACAGCTTTGCCGAGAATCTGGATTATCCTGACAAGA GTGATGACTGGATGAAATATGTCAATTCCAAATACGAAAACGGGCAGCTTCACATGATTTACAGAGAGCTTGTCGGAAGG GAGGCGCGTTATGAGCATAATGATTGA
Upstream 100 bases:
>100_bases CTGATGGAAAACAGCGAGATGCAGGAGCAGGATGTATTCTACATTTAGATACAAGAATAGTCTAAAGCTTGTGATTGAAA GAGGAAGCAGAGGGAGATAA
Downstream 100 bases:
>100_bases TAAAGCAAAGTGTAAGGGCTGTGGCATGTGTACAAGTGTATGCCCGGGAAGCCTGATATATCAGGACTCAGAGAAAAAAG CCTTTATCAAATATCCTAAG
Product: adenylylsulfate reductase subunit alpha
Products: Adenylylsulfate; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MKIENKKILHTDILIIGGGTAGCYAALTIREKSDYSIIIAEKANIKRSGCLAAGVNAINAYIVKGRKPEDYVDYAKKDAD GIVREDLLMTMSEGLNRVTDKMEKLGLVILKDENGEYVARGNRNIKINGENMKPILAEAVSKITDCTVINRINITDYIVE NNTIKGAYGFSIEDATAYEIRAKKVLCATGGAAGLYRPNNPGFSRHKMWYPPFNTGAGYAMGIRSGAEMTTFEMRFIALR CKDTIAPTGTIAQGVGAKQVNSLGEVYETKYGLTTSERVYGTVMENLEGRGPCYLRTEGISPQQDESLRKAYLNMAPSQT LKWVEAGKNPSEQNVEIEGTEPYIVGGHTASGYWVNTERETTIHGLYAAGDVAGGCPQKYVTGAMVEGEIAAIDMVSKLD ADTSDGSPDTSAFDEKKALEAKASEYDHFLTERFKMFTTEAIEEAMQKVMDNYAGGISTHYQFNGKQLALAKEKINHLIE LTGDLYASDMHELMFIYELKERLTVCLSVIAHLGARKETRWHSFAENLDYPDKSDDWMKYVNSKYENGQLHMIYRELVGR EARYEHND
Sequences:
>Translated_568_residues MKIENKKILHTDILIIGGGTAGCYAALTIREKSDYSIIIAEKANIKRSGCLAAGVNAINAYIVKGRKPEDYVDYAKKDAD GIVREDLLMTMSEGLNRVTDKMEKLGLVILKDENGEYVARGNRNIKINGENMKPILAEAVSKITDCTVINRINITDYIVE NNTIKGAYGFSIEDATAYEIRAKKVLCATGGAAGLYRPNNPGFSRHKMWYPPFNTGAGYAMGIRSGAEMTTFEMRFIALR CKDTIAPTGTIAQGVGAKQVNSLGEVYETKYGLTTSERVYGTVMENLEGRGPCYLRTEGISPQQDESLRKAYLNMAPSQT LKWVEAGKNPSEQNVEIEGTEPYIVGGHTASGYWVNTERETTIHGLYAAGDVAGGCPQKYVTGAMVEGEIAAIDMVSKLD ADTSDGSPDTSAFDEKKALEAKASEYDHFLTERFKMFTTEAIEEAMQKVMDNYAGGISTHYQFNGKQLALAKEKINHLIE LTGDLYASDMHELMFIYELKERLTVCLSVIAHLGARKETRWHSFAENLDYPDKSDDWMKYVNSKYENGQLHMIYRELVGR EARYEHND >Mature_568_residues MKIENKKILHTDILIIGGGTAGCYAALTIREKSDYSIIIAEKANIKRSGCLAAGVNAINAYIVKGRKPEDYVDYAKKDAD GIVREDLLMTMSEGLNRVTDKMEKLGLVILKDENGEYVARGNRNIKINGENMKPILAEAVSKITDCTVINRINITDYIVE NNTIKGAYGFSIEDATAYEIRAKKVLCATGGAAGLYRPNNPGFSRHKMWYPPFNTGAGYAMGIRSGAEMTTFEMRFIALR CKDTIAPTGTIAQGVGAKQVNSLGEVYETKYGLTTSERVYGTVMENLEGRGPCYLRTEGISPQQDESLRKAYLNMAPSQT LKWVEAGKNPSEQNVEIEGTEPYIVGGHTASGYWVNTERETTIHGLYAAGDVAGGCPQKYVTGAMVEGEIAAIDMVSKLD ADTSDGSPDTSAFDEKKALEAKASEYDHFLTERFKMFTTEAIEEAMQKVMDNYAGGISTHYQFNGKQLALAKEKINHLIE LTGDLYASDMHELMFIYELKERLTVCLSVIAHLGARKETRWHSFAENLDYPDKSDDWMKYVNSKYENGQLHMIYRELVGR EARYEHND
Specific function: Unknown
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR015939 - InterPro: IPR004112 [H]
Pfam domain/function: PF00890 FAD_binding_2; PF02910 Succ_DH_flav_C [H]
EC number: 1.8.99.2
Molecular weight: Translated: 63093; Mature: 63093
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIENKKILHTDILIIGGGTAGCYAALTIREKSDYSIIIAEKANIKRSGCLAAGVNAINA CCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCEEEE YIVKGRKPEDYVDYAKKDADGIVREDLLMTMSEGLNRVTDKMEKLGLVILKDENGEYVAR EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEE GNRNIKINGENMKPILAEAVSKITDCTVINRINITDYIVENNTIKGAYGFSIEDATAYEI CCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECCEECCEECCCCCCCCEEEE RAKKVLCATGGAAGLYRPNNPGFSRHKMWYPPFNTGAGYAMGIRSGAEMTTFEMRFIALR EEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEEEEE CKDTIAPTGTIAQGVGAKQVNSLGEVYETKYGLTTSERVYGTVMENLEGRGPCYLRTEGI ECCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCC SPQQDESLRKAYLNMAPSQTLKWVEAGKNPSEQNVEIEGTEPYIVGGHTASGYWVNTERE CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCEEECCCCC TTIHGLYAAGDVAGGCPQKYVTGAMVEGEIAAIDMVSKLDADTSDGSPDTSAFDEKKALE CEEEEEEEECCCCCCCCHHHHCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AKASEYDHFLTERFKMFTTEAIEEAMQKVMDNYAGGISTHYQFNGKQLALAKEKINHLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHH LTGDLYASDMHELMFIYELKERLTVCLSVIAHLGARKETRWHSFAENLDYPDKSDDWMKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHH VNSKYENGQLHMIYRELVGREARYEHND HHCCCCCCCEEEEHHHHHCCCCCCCCCC >Mature Secondary Structure MKIENKKILHTDILIIGGGTAGCYAALTIREKSDYSIIIAEKANIKRSGCLAAGVNAINA CCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCHHHCCCEEEE YIVKGRKPEDYVDYAKKDADGIVREDLLMTMSEGLNRVTDKMEKLGLVILKDENGEYVAR EEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEE GNRNIKINGENMKPILAEAVSKITDCTVINRINITDYIVENNTIKGAYGFSIEDATAYEI CCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECCEECCEECCCCCCCCEEEE RAKKVLCATGGAAGLYRPNNPGFSRHKMWYPPFNTGAGYAMGIRSGAEMTTFEMRFIALR EEEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEEEEEEE CKDTIAPTGTIAQGVGAKQVNSLGEVYETKYGLTTSERVYGTVMENLEGRGPCYLRTEGI ECCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEEEECCC SPQQDESLRKAYLNMAPSQTLKWVEAGKNPSEQNVEIEGTEPYIVGGHTASGYWVNTERE CCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEECCCCEEECCCCCCCEEECCCCC TTIHGLYAAGDVAGGCPQKYVTGAMVEGEIAAIDMVSKLDADTSDGSPDTSAFDEKKALE CEEEEEEEECCCCCCCCHHHHCCEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH AKASEYDHFLTERFKMFTTEAIEEAMQKVMDNYAGGISTHYQFNGKQLALAKEKINHLIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHH LTGDLYASDMHELMFIYELKERLTVCLSVIAHLGARKETRWHSFAENLDYPDKSDDWMKY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHH VNSKYENGQLHMIYRELVGREARYEHND HHCCCCCCCEEEEHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: AMP; sulfite; acceptor
Specific reaction: AMP + sulfite + acceptor = adenylyl sulfate + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]