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The map label for this gene is ygiQ [C]

Identifier: 238924044

GI number: 238924044

Start: 1564271

End: 1566283

Strand: Direct

Name: ygiQ [C]

Synonym: EUBREC_1682

Alternate gene names: 238924044

Gene position: 1564271-1566283 (Clockwise)

Preceding gene: 238924043

Following gene: 238924045

Centisome position: 45.35

GC content: 46.1

Gene sequence:

>2013_bases
ATGAGGTATGATATGAGTAATGGTTTTTTACCAATTTCAAAACAGGATATGATAGATGAGGGCATTGAGCAGCTTGATTT
TGTGTATGTCTGCGGTGATGCATATGTGGATCATCCGTCCTTTGGACATGCAATAATTGCAAGGCTGCTGCAGGCACATG
GCTATACGGTCGGCATCATTTCACAGCCCGACTGGAAGGATGATGAGTCTATATCCATACTCGGAGTGCCGCGCCTTGGC
TTTTTGGTTTCGGCAGGTAATATGGACTCCATGGTAAACCATTATTCGGTTTCAAAGAAAAGAAGAGCAAAGGATTCATT
TACACCGGGTGGCGTGATGGGAAAGAGACCTGATTATGCGACCGTTGTGTACTGTAACCTGATACGCCATACTTATAAAA
AAATCCCTATCATAATAGGCGGCATCGAGGCGAGCCTTAGGCGCATGGCACATTATGATTACTGGTCAAATAAAGTCAAG
CGCTCGATTCTTTTAGATTCCGGTGCGGATCTCATCTCATATGGCATGGGAGAAAGAAGCATCATCGAGATAGCGGATGC
GCTTGCCAGTGGTATGGATGTAAAGGATATCACGTTTATAGATGGTACCGTGTTTAAGACAAAGGACAGGGATATCATAT
ATGATGCGATTGAGCTTCCGGATTATGACGTTATAAAAGAGGACAAGAGGGAGTTTGCAAGGAGCTTTTACATACAGTAC
TGCAATACTGATCCTTTCTGCGCAAAGAGGCTCATAGAGCCGTATGACAACTCTACGCTTGTGGTGCAGAATCCGCCGCA
AAAGCCACTGTCGCAGGAGGAGATGGATGAGGTATATGCGCTTCCTTATATGAGGACTTATCACCCAAGCTACGAGGAGG
CAGGAGGAGTGCCTGCGATAAGCGAGGTGAAGTTTTCTCTTATCAGCAACAGAGGCTGCTTTGGAGGCTGTAACTTCTGT
GCTCTGACCTTCCATCAGGGCAGGATAATCCAGACAAGAAGTCATGAGTCAATCATAGAAGAGGCAAAGCTTATCACACA
GGATAAGGACTTTAAGGGCTATATCCATGATGTTGGTGGTCCTACAGCCAATTTCAGGCAGCCGGCATGTAAAAAGCAGC
TCACAAGGGGTGCATGTCCTACAAAGCAGTGTCTGTTTCCTAAGCCGTGCAATAACCTGATTGTTGACCACAGCGACTAT
ATACAGCTGCTTAGAGAGCTTCGTGCACTGCCAAAGGTAAAAAAGGTGTTTATCCGCTCAGGTATCAGGTTTGACTATCT
GATGTATGACAAAGACAAGACATTTCTTCGTGAGCTGTGTGAGTATCATGTCAGCGGACAGCTCAAGGTAGCTCCGGAGC
ATATCTCCAATGCTGTTTTGAGCAGGCTTGGAAAGCCGAGTGTAGAGGTATACAACAGCTTTGTGAAGGCATACAAGGAT
ATGAATAAAAAGATAGGCAAGGAGCAGTATCTTGTGCCTTATCTCATGTCTTCACACCCGGGCTCAACGCTTAAGGAAGC
GATAGAGCTTGCGGAGTATCTGCGCGATCTGGGATATATGCCTGAGCAGGTGCAGGATTTCTATCCGACACCGTCTACCA
TCTCTACATGCATGTACTATACAGGGCTTGACCCGGCGACACTTAAGCCGGTGTATGTCACAACTAACCCGCATGAGAAG
GCTATGCAGAGGGCACTCATCCAGTACCGCAATCCAAAGAACTACGATCTCGTGCACGAGGCACTTGTGAAGGCCGGCAG
GGAGGACTTAATCGGATTTGACAAAAAGTGCCTGATAAAGCCTAGGAAAATGCATACTGATGGCGGCTGGGACAAAAAAA
CTTCTAAGTCTGATAAAAATTCAAACAGCAGCTATGGCAGCGGCAAGAATGCAGGTGTAAGGAAAAACTTGAAAAATGCA
ACAGAGCGAGGGAAAAACGCAAGCGGAAGTAACACCGCAGGCACAGCGCACAAAAAGAAAACAATCAGAAACGTCCACAA
GAAGAAAAGATAA

Upstream 100 bases:

>100_bases
TGCCTGATGACCTTAAAACAGGGACTTACAGAGCTTTGACACAGGCTGAAACGGATATGCTTATGCAGATAAAATCCGGC
AAATAAAATAATTTTTAATT

Downstream 100 bases:

>100_bases
ATAAAGACTATGAAAGAATTTAAAGCTGGTAAAAACGAGGCAGGCCAGAGGCTTGACAAATACCTTAAAAAGATACTTCC
AAACGCATCCATGGGCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MRYDMSNGFLPISKQDMIDEGIEQLDFVYVCGDAYVDHPSFGHAIIARLLQAHGYTVGIISQPDWKDDESISILGVPRLG
FLVSAGNMDSMVNHYSVSKKRRAKDSFTPGGVMGKRPDYATVVYCNLIRHTYKKIPIIIGGIEASLRRMAHYDYWSNKVK
RSILLDSGADLISYGMGERSIIEIADALASGMDVKDITFIDGTVFKTKDRDIIYDAIELPDYDVIKEDKREFARSFYIQY
CNTDPFCAKRLIEPYDNSTLVVQNPPQKPLSQEEMDEVYALPYMRTYHPSYEEAGGVPAISEVKFSLISNRGCFGGCNFC
ALTFHQGRIIQTRSHESIIEEAKLITQDKDFKGYIHDVGGPTANFRQPACKKQLTRGACPTKQCLFPKPCNNLIVDHSDY
IQLLRELRALPKVKKVFIRSGIRFDYLMYDKDKTFLRELCEYHVSGQLKVAPEHISNAVLSRLGKPSVEVYNSFVKAYKD
MNKKIGKEQYLVPYLMSSHPGSTLKEAIELAEYLRDLGYMPEQVQDFYPTPSTISTCMYYTGLDPATLKPVYVTTNPHEK
AMQRALIQYRNPKNYDLVHEALVKAGREDLIGFDKKCLIKPRKMHTDGGWDKKTSKSDKNSNSSYGSGKNAGVRKNLKNA
TERGKNASGSNTAGTAHKKKTIRNVHKKKR

Sequences:

>Translated_670_residues
MRYDMSNGFLPISKQDMIDEGIEQLDFVYVCGDAYVDHPSFGHAIIARLLQAHGYTVGIISQPDWKDDESISILGVPRLG
FLVSAGNMDSMVNHYSVSKKRRAKDSFTPGGVMGKRPDYATVVYCNLIRHTYKKIPIIIGGIEASLRRMAHYDYWSNKVK
RSILLDSGADLISYGMGERSIIEIADALASGMDVKDITFIDGTVFKTKDRDIIYDAIELPDYDVIKEDKREFARSFYIQY
CNTDPFCAKRLIEPYDNSTLVVQNPPQKPLSQEEMDEVYALPYMRTYHPSYEEAGGVPAISEVKFSLISNRGCFGGCNFC
ALTFHQGRIIQTRSHESIIEEAKLITQDKDFKGYIHDVGGPTANFRQPACKKQLTRGACPTKQCLFPKPCNNLIVDHSDY
IQLLRELRALPKVKKVFIRSGIRFDYLMYDKDKTFLRELCEYHVSGQLKVAPEHISNAVLSRLGKPSVEVYNSFVKAYKD
MNKKIGKEQYLVPYLMSSHPGSTLKEAIELAEYLRDLGYMPEQVQDFYPTPSTISTCMYYTGLDPATLKPVYVTTNPHEK
AMQRALIQYRNPKNYDLVHEALVKAGREDLIGFDKKCLIKPRKMHTDGGWDKKTSKSDKNSNSSYGSGKNAGVRKNLKNA
TERGKNASGSNTAGTAHKKKTIRNVHKKKR
>Mature_670_residues
MRYDMSNGFLPISKQDMIDEGIEQLDFVYVCGDAYVDHPSFGHAIIARLLQAHGYTVGIISQPDWKDDESISILGVPRLG
FLVSAGNMDSMVNHYSVSKKRRAKDSFTPGGVMGKRPDYATVVYCNLIRHTYKKIPIIIGGIEASLRRMAHYDYWSNKVK
RSILLDSGADLISYGMGERSIIEIADALASGMDVKDITFIDGTVFKTKDRDIIYDAIELPDYDVIKEDKREFARSFYIQY
CNTDPFCAKRLIEPYDNSTLVVQNPPQKPLSQEEMDEVYALPYMRTYHPSYEEAGGVPAISEVKFSLISNRGCFGGCNFC
ALTFHQGRIIQTRSHESIIEEAKLITQDKDFKGYIHDVGGPTANFRQPACKKQLTRGACPTKQCLFPKPCNNLIVDHSDY
IQLLRELRALPKVKKVFIRSGIRFDYLMYDKDKTFLRELCEYHVSGQLKVAPEHISNAVLSRLGKPSVEVYNSFVKAYKD
MNKKIGKEQYLVPYLMSSHPGSTLKEAIELAEYLRDLGYMPEQVQDFYPTPSTISTCMYYTGLDPATLKPVYVTTNPHEK
AMQRALIQYRNPKNYDLVHEALVKAGREDLIGFDKKCLIKPRKMHTDGGWDKKTSKSDKNSNSSYGSGKNAGVRKNLKNA
TERGKNASGSNTAGTAHKKKTIRNVHKKKR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=715, Percent_Identity=37.3426573426573, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 75841; Mature: 75841

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYDMSNGFLPISKQDMIDEGIEQLDFVYVCGDAYVDHPSFGHAIIARLLQAHGYTVGII
CCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEE
SQPDWKDDESISILGVPRLGFLVSAGNMDSMVNHYSVSKKRRAKDSFTPGGVMGKRPDYA
CCCCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
TVVYCNLIRHTYKKIPIIIGGIEASLRRMAHYDYWSNKVKRSILLDSGADLISYGMGERS
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHH
IIEIADALASGMDVKDITFIDGTVFKTKDRDIIYDAIELPDYDVIKEDKREFARSFYIQY
HHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHC
CNTDPFCAKRLIEPYDNSTLVVQNPPQKPLSQEEMDEVYALPYMRTYHPSYEEAGGVPAI
CCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHCCCCHHHCCCCCCH
SEVKFSLISNRGCFGGCNFCALTFHQGRIIQTRSHESIIEEAKLITQDKDFKGYIHDVGG
HHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCC
PTANFRQPACKKQLTRGACPTKQCLFPKPCNNLIVDHSDYIQLLRELRALPKVKKVFIRS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHC
GIRFDYLMYDKDKTFLRELCEYHVSGQLKVAPEHISNAVLSRLGKPSVEVYNSFVKAYKD
CCCEEEEEECCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MNKKIGKEQYLVPYLMSSHPGSTLKEAIELAEYLRDLGYMPEQVQDFYPTPSTISTCMYY
HHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHC
TGLDPATLKPVYVTTNPHEKAMQRALIQYRNPKNYDLVHEALVKAGREDLIGFDKKCLIK
CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCHHHHCC
PRKMHTDGGWDKKTSKSDKNSNSSYGSGKNAGVRKNLKNATERGKNASGSNTAGTAHKKK
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
TIRNVHKKKR
HHHHHHHHCC
>Mature Secondary Structure
MRYDMSNGFLPISKQDMIDEGIEQLDFVYVCGDAYVDHPSFGHAIIARLLQAHGYTVGII
CCCCCCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEE
SQPDWKDDESISILGVPRLGFLVSAGNMDSMVNHYSVSKKRRAKDSFTPGGVMGKRPDYA
CCCCCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
TVVYCNLIRHTYKKIPIIIGGIEASLRRMAHYDYWSNKVKRSILLDSGADLISYGMGERS
HHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHH
IIEIADALASGMDVKDITFIDGTVFKTKDRDIIYDAIELPDYDVIKEDKREFARSFYIQY
HHHHHHHHHCCCCCCEEEEECCEEEECCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHC
CNTDPFCAKRLIEPYDNSTLVVQNPPQKPLSQEEMDEVYALPYMRTYHPSYEEAGGVPAI
CCCCHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCHHHCCCCHHHCCCCCCH
SEVKFSLISNRGCFGGCNFCALTFHQGRIIQTRSHESIIEEAKLITQDKDFKGYIHDVGG
HHHHHHHHHCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCHHCCCCC
PTANFRQPACKKQLTRGACPTKQCLFPKPCNNLIVDHSDYIQLLRELRALPKVKKVFIRS
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHC
GIRFDYLMYDKDKTFLRELCEYHVSGQLKVAPEHISNAVLSRLGKPSVEVYNSFVKAYKD
CCCEEEEEECCCHHHHHHHHHHHCCCCEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
MNKKIGKEQYLVPYLMSSHPGSTLKEAIELAEYLRDLGYMPEQVQDFYPTPSTISTCMYY
HHHHCCCCCEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHC
TGLDPATLKPVYVTTNPHEKAMQRALIQYRNPKNYDLVHEALVKAGREDLIGFDKKCLIK
CCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHCCCHHHHCC
PRKMHTDGGWDKKTSKSDKNSNSSYGSGKNAGVRKNLKNATERGKNASGSNTAGTAHKKK
CHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHH
TIRNVHKKKR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]