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The map label for this gene is scpA [H]

Identifier: 238923985

GI number: 238923985

Start: 1513637

End: 1514386

Strand: Direct

Name: scpA [H]

Synonym: EUBREC_1623

Alternate gene names: 238923985

Gene position: 1513637-1514386 (Clockwise)

Preceding gene: 238923984

Following gene: 238923986

Centisome position: 43.88

GC content: 42.93

Gene sequence:

>750_bases
ATGGATATGACTTTTAAGCTTCAGGTGTTTGAGGGACCGCTTGACCTGCTTTTATACCTGATAGAGAAAAATAAAGTAAA
TATTTATGATATCCCGATTGTCGAGATTACAGCGCAGTACATGGAGTATGTGAATCAGATGAAAAAGGATAACCTGGACA
CGCTCAGCGAGTTTCTCGTGATGGCAGCTACGCTCCTCGACATAAAGTCAAAGATGCTTCTCCCAAAGAAAGAGGAAGAA
GAGCAGGAGCAGGAAGATCCAAGAGCAGAGCTTGTGCAGCAGCTGCTTGAGTACAAGATGTACAAGTGCATGGCAAACGA
GCTTAAGGATCGCCAGCTGGATGCCGGCAAGGTGTGGTATAAGAAGAAGGACATACCTGATGAGGTGCTTGCATATGAGG
AGCCTGTTAATCTTGAGGAGCTTGTCGGAGATATCCGTCTTTCTGATTTAAACAGAATCTTTCAAAGTATAATGAAGAGA
CAGGAAGAAAAGATAGATAAGGTCCGTTCGAAGTTTGGAAAGATTGAAAAGGAAGAGGTCTCCTTAGAGGAAAAGATGGA
ATATCTGACAGACTATGCTGCCTCACACAAGCACTTCAGCTTCAGAGGGATGCTTACTGCATCGTCAAGCAAAGTGGAAG
TCATAGTTACATTTCTTGCCATACTGGAGCTTATGAAGACCGGCAAATTAACTATCGTTCAGGAGCATATTTTTGATGAT
ATCCGGATTGAGTCAAGGATTGCTGCATAA

Upstream 100 bases:

>100_bases
CTCGTGGTAAAGGCCGGGCATATCTATTTATCGGAGAGAGGAAAAGATGTAGCCAATTACGTTATGGCACAGTTTTTGAA
GGATTAACGGAGAGTAAATT

Downstream 100 bases:

>100_bases
AGAGGGGTTGAGGATATATGAATTATAAAGCTGCAATAGAGGCTATTTTATTTACCATGGGAGAATCCGTGGAGCTTGGA
AGGATAGCCGATGCAATACA

Product: segregation and condensation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDMTFKLQVFEGPLDLLLYLIEKNKVNIYDIPIVEITAQYMEYVNQMKKDNLDTLSEFLVMAATLLDIKSKMLLPKKEEE
EQEQEDPRAELVQQLLEYKMYKCMANELKDRQLDAGKVWYKKKDIPDEVLAYEEPVNLEELVGDIRLSDLNRIFQSIMKR
QEEKIDKVRSKFGKIEKEEVSLEEKMEYLTDYAASHKHFSFRGMLTASSSKVEVIVTFLAILELMKTGKLTIVQEHIFDD
IRIESRIAA

Sequences:

>Translated_249_residues
MDMTFKLQVFEGPLDLLLYLIEKNKVNIYDIPIVEITAQYMEYVNQMKKDNLDTLSEFLVMAATLLDIKSKMLLPKKEEE
EQEQEDPRAELVQQLLEYKMYKCMANELKDRQLDAGKVWYKKKDIPDEVLAYEEPVNLEELVGDIRLSDLNRIFQSIMKR
QEEKIDKVRSKFGKIEKEEVSLEEKMEYLTDYAASHKHFSFRGMLTASSSKVEVIVTFLAILELMKTGKLTIVQEHIFDD
IRIESRIAA
>Mature_249_residues
MDMTFKLQVFEGPLDLLLYLIEKNKVNIYDIPIVEITAQYMEYVNQMKKDNLDTLSEFLVMAATLLDIKSKMLLPKKEEE
EQEQEDPRAELVQQLLEYKMYKCMANELKDRQLDAGKVWYKKKDIPDEVLAYEEPVNLEELVGDIRLSDLNRIFQSIMKR
QEEKIDKVRSKFGKIEKEEVSLEEKMEYLTDYAASHKHFSFRGMLTASSSKVEVIVTFLAILELMKTGKLTIVQEHIFDD
IRIESRIAA

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29218; Mature: 29218

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMTFKLQVFEGPLDLLLYLIEKNKVNIYDIPIVEITAQYMEYVNQMKKDNLDTLSEFLV
CCCEEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLLDIKSKMLLPKKEEEEQEQEDPRAELVQQLLEYKMYKCMANELKDRQLDAGKVWY
HHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHE
KKKDIPDEVLAYEEPVNLEELVGDIRLSDLNRIFQSIMKRQEEKIDKVRSKFGKIEKEEV
ECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SLEEKMEYLTDYAASHKHFSFRGMLTASSSKVEVIVTFLAILELMKTGKLTIVQEHIFDD
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
IRIESRIAA
HHHHHHCCC
>Mature Secondary Structure
MDMTFKLQVFEGPLDLLLYLIEKNKVNIYDIPIVEITAQYMEYVNQMKKDNLDTLSEFLV
CCCEEEEEEECCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MAATLLDIKSKMLLPKKEEEEQEQEDPRAELVQQLLEYKMYKCMANELKDRQLDAGKVWY
HHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHE
KKKDIPDEVLAYEEPVNLEELVGDIRLSDLNRIFQSIMKRQEEKIDKVRSKFGKIEKEEV
ECCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
SLEEKMEYLTDYAASHKHFSFRGMLTASSSKVEVIVTFLAILELMKTGKLTIVQEHIFDD
HHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHH
IRIESRIAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]