| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923927
Identifier: 238923927
GI number: 238923927
Start: 1450617
End: 1451981
Strand: Direct
Name: 238923927
Synonym: EUBREC_1565
Alternate gene names: NA
Gene position: 1450617-1451981 (Clockwise)
Preceding gene: 238923926
Following gene: 238923928
Centisome position: 42.05
GC content: 46.3
Gene sequence:
>1365_bases ATGATAAATATTGGTGAAGTAATTGAGACCAATGACATGGTGGAGAAGGAAAATCTTGACGTGCGTACAATCACACTCGG TATCAGCCTGCTCGACTGTATAGACTCAGACCTTGCAAAGGTAAATGAGAATATCTACAACAAGATTACAACACTTGCAA AGAATCTTGTATCAACAGGAAAAGAGATAGAGAACAACTACTGTATCCCTATTGTAAACAAACGTATTTCAGTTACACCT ATCGCCCTTGTCGGCGGTGCGGCCTGCAAGAGCTCAGAGGATTTTGTTACCATAGCAAAGACACTTGACAGAGCTGCCAA AGAGGTAGGTGTCAACTTCATCGGTGGATACTCAGCACTTGTATCAAAGGGCATGACAAAGGCGGATGAGCTTTTAATCA AATCCATCCCTCAGGCAATGCTTGAGACAGACCTGGTATGCAGCTCTGTAAATGTTGGCTCTACAAAAACCGGAATCAAC ATGGATGCAGTAAAGCTGATTGGCGAGATGATAAAGGAGACAGCAGAGGTGACAAAACACCTTCCTGTATCAGGCTGTGC CAAGTTTGTAGTATTCTGCAACGCTCCTGATGACAATCCGTTTATGGCAGGAGCCTTCCATGGTGTGACAGAGGCTGATG CCATCATCAATGTAGGTGTCAGCGGACCCGGAGTAGTAAAGACTGCTCTTGAAAAGGTAAGAGGCGAGAACTTTGAGGTG CTCTGTGAGACAATCAAGAAGACAGCCTTCAAGGTTACACGAGTAGGACAGCTTGTGGCAAAGGAGGCTTCAAAGAAGCT TGGAGTGCCATTTGGAATCATAGACCTTTCACTTGCACCTACACCGGCTATCGGAGACTCTGTAGCTGATATTCTCTGTG AGATAGGCTTAGAGAGAGCCGGAGCTCCGGGAACAACAGCAGCACTTGCACTCTTAAACGATCAGGTGAAAAAGGGCGGT ATCATGGCATCCTCATATGTCGGCGGACTCTCAGGTGCCTTTATTCCGGTATCAGAGGATCAGGGAATGATAGATGCCGT AAACGATGGTGCACTCACCCTCGAAAAGCTTGAGGCTATGACCTGTGTGTGCTCAGTGGGACTTGACATGATTGCAATCC CGGGCGATACAAAGGCCACCACAATTTCAGGAATTATTGCAGATGAGATGGCTATCGGTATGATAAACCAGAAGACAACA GCCTGCAGACTGCTTCCGGCAATCGGAAAGGATGTAGGTGATGTGGTAGAAATCGGAGGACTCCTTGGAAGTGCACCGGT TATGCCGGTAAACAGATTCTCTTGTGATGCATTTGTAAATCGTGGAGGAAGAATCCCGGCACCTATTCATAGCTTTAAAA ATTAG
Upstream 100 bases:
>100_bases GGTGTAACAATAAAGTGTCAGAAGGAAGAAATCTTTGAGATGATGCATCGAATCTAGTTTAGCATAAAAATGTCATACAC AGTTAAAGGAGAACAGCAAA
Downstream 100 bases:
>100_bases TAAATAATGGCATTGTTTACAAGCATGTACTTATAAGAATAACTTATAAGTACATGCTTATTTTAAAGTGGTACTTGACA ATGACAAAAATACATGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN
Sequences:
>Translated_454_residues MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN >Mature_454_residues MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTGKEIENNYCIPIVNKRISVTP IALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSALVSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGIN MDAVKLIGEMIKETAEVTKHLPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERAGAPGTTAALALLNDQVKKGG IMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAMTCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTT ACRLLPAIGKDVGDVVEIGGLLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1565_EUBR3 (C4Z987)
Other databases:
- EMBL: CP001107 - RefSeq: YP_002937443.1 - ProteinModelPortal: C4Z987 - GeneID: 7965522 - GenomeReviews: CP001107_GR - KEGG: ere:EUBREC_1565 - ProtClustDB: PRK05313 - HAMAP: MF_01221 - InterPro: IPR007841
Pfam domain/function: PF05167 DUF711
EC number: NA
Molecular weight: Translated: 47420; Mature: 47420
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTG CCCCCCHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEIENNYCIPIVNKRISVTPIALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSAL HHHCCCCEEEEECCCEEECEEHEECCHHCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHH VSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGINMDAVKLIGEMIKETAEVTKH HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV CCHHCCEEEEEEEECCCCCCEEEEHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHH LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC GAPGTTAALALLNDQVKKGGIMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAM CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH TCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTTACRLLPAIGKDVGDVVEIGG HHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH LLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN HHCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC >Mature Secondary Structure MINIGEVIETNDMVEKENLDVRTITLGISLLDCIDSDLAKVNENIYNKITTLAKNLVSTG CCCCCCHHCCCCCHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KEIENNYCIPIVNKRISVTPIALVGGAACKSSEDFVTIAKTLDRAAKEVGVNFIGGYSAL HHHCCCCEEEEECCCEEECEEHEECCHHCCCCCCHHHHHHHHHHHHHHHCCHHCCHHHHH VSKGMTKADELLIKSIPQAMLETDLVCSSVNVGSTKTGINMDAVKLIGEMIKETAEVTKH HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC LPVSGCAKFVVFCNAPDDNPFMAGAFHGVTEADAIINVGVSGPGVVKTALEKVRGENFEV CCHHCCEEEEEEEECCCCCCEEEEHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHH LCETIKKTAFKVTRVGQLVAKEASKKLGVPFGIIDLSLAPTPAIGDSVADILCEIGLERA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCC GAPGTTAALALLNDQVKKGGIMASSYVGGLSGAFIPVSEDQGMIDAVNDGALTLEKLEAM CCCCHHHHHHHHHHHHHHCCEEEHHHHCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHH TCVCSVGLDMIAIPGDTKATTISGIIADEMAIGMINQKTTACRLLPAIGKDVGDVVEIGG HHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHH LLGSAPVMPVNRFSCDAFVNRGGRIPAPIHSFKN HHCCCCCCCCCCCCHHHHHCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA