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The map label for this gene is yycJ [H]

Identifier: 238923925

GI number: 238923925

Start: 1449514

End: 1450266

Strand: Direct

Name: yycJ [H]

Synonym: EUBREC_1563

Alternate gene names: 238923925

Gene position: 1449514-1450266 (Clockwise)

Preceding gene: 238923924

Following gene: 238923926

Centisome position: 42.02

GC content: 45.68

Gene sequence:

>753_bases
GTGGGTACGGATGATTGTCATGTGCTCATAGACGCGGGCATCAGCGGTAAGAAAATAGAAAACGGACTGAATGAATTTGA
TATGACTGCCACAGATATGCATGGGATTCTCGTGACACATGAGCATATAGACCATATCGCAGGGCTTGGTGTCATGGCAA
GACGCTATCATATGCCGATTTATGCAACAAAGGCCACAATCGGGGCCATAAAATGTACCAAATCCGTTGGAAATATAGAT
GATGAGCTGTTTCATCCTATTGAGGCAGGCGTCGATTTTACGATAGGTGATATAGAGTTTGAGCCGCTTCACATATCACA
TGATGCGGCTGATCCTGTCGCGTACAGATTTAAAAACGAAAATCATGCGATGGCAGTCGTGACAGACCTTGGCACGTATG
ATGATGCACTGGTTTCAAAGCTTCAGAACCTGGATGGGCTGCTGCTTGAAGCCAATCATGATATAAATATGCTGCAGACA
GGGGCATATCCGTATCCGCTCAAGCGCAGAATCATGGGTGACAGCGGACATTTGTCGAATGAGAGAAGCGGGCAGTTGTT
ATGCGAGCTTCTTCATGATAAATTTGGCTCAGTAATACTGGGACACCTTAGTAAAGAAAACAACTACGAAAAGCTGGCGT
ATGAAGCCGTCAGGCTTGAGGTCACAATGGGAGACAATCCATATAAGGCAAGTGATTTCCCTATGTATGTGGCTAAGAGA
GACAGGGCATCAGACCGCATAGCCGTAGAATAA

Upstream 100 bases:

>100_bases
GAGCTTCATGAGGGAGACAAAATAGAATTATACTGGAAAGAGAATTAACATGTTAGAATTATGCAGCATTGCCAGCGGCA
GCAGTGGAAACTGTATATGC

Downstream 100 bases:

>100_bases
GAGAACAGGAGAATAAGTTGTTATGGATAACACAAAGAACAAAGTAATCATCACAGTTGTTGGAAAAGACACAGTAGGAA
TCATCGCAAAGGTATGTACA

Product: ribonuclease Z

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MGTDDCHVLIDAGISGKKIENGLNEFDMTATDMHGILVTHEHIDHIAGLGVMARRYHMPIYATKATIGAIKCTKSVGNID
DELFHPIEAGVDFTIGDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQT
GAYPYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYEAVRLEVTMGDNPYKASDFPMYVAKR
DRASDRIAVE

Sequences:

>Translated_250_residues
MGTDDCHVLIDAGISGKKIENGLNEFDMTATDMHGILVTHEHIDHIAGLGVMARRYHMPIYATKATIGAIKCTKSVGNID
DELFHPIEAGVDFTIGDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQT
GAYPYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYEAVRLEVTMGDNPYKASDFPMYVAKR
DRASDRIAVE
>Mature_249_residues
GTDDCHVLIDAGISGKKIENGLNEFDMTATDMHGILVTHEHIDHIAGLGVMARRYHMPIYATKATIGAIKCTKSVGNIDD
ELFHPIEAGVDFTIGDIEFEPLHISHDAADPVAYRFKNENHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTG
AYPYPLKRRIMGDSGHLSNERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYEAVRLEVTMGDNPYKASDFPMYVAKRD
RASDRIAVE

Specific function: Unknown

COG id: COG1235

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 27710; Mature: 27579

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTDDCHVLIDAGISGKKIENGLNEFDMTATDMHGILVTHEHIDHIAGLGVMARRYHMPI
CCCCCEEEEEECCCCCHHHHCCCCHHCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCE
YATKATIGAIKCTKSVGNIDDELFHPIEAGVDFTIGDIEFEPLHISHDAADPVAYRFKNE
EEECCCCEEEEEECCCCCCCHHHHHHHHCCCCEEECCEEEEEEEECCCCCCCEEEEEECC
NHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTGAYPYPLKRRIMGDSGHLSN
CCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHHCCCCCCCCCC
ERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYEAVRLEVTMGDNPYKASDFPMYVAKR
CCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHEEEEEEEEEEECCCCCCCCCCCEEEEEC
DRASDRIAVE
CCCCCCEECC
>Mature Secondary Structure 
GTDDCHVLIDAGISGKKIENGLNEFDMTATDMHGILVTHEHIDHIAGLGVMARRYHMPI
CCCCEEEEEECCCCCHHHHCCCCHHCCCHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCE
YATKATIGAIKCTKSVGNIDDELFHPIEAGVDFTIGDIEFEPLHISHDAADPVAYRFKNE
EEECCCCEEEEEECCCCCCCHHHHHHHHCCCCEEECCEEEEEEEECCCCCCCEEEEEECC
NHAMAVVTDLGTYDDALVSKLQNLDGLLLEANHDINMLQTGAYPYPLKRRIMGDSGHLSN
CCEEEEEEECCCCHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHHCCCCCCCCCC
ERSGQLLCELLHDKFGSVILGHLSKENNYEKLAYEAVRLEVTMGDNPYKASDFPMYVAKR
CCHHHHHHHHHHHHHHHEEEECCCCCCCHHHHEEEEEEEEEEECCCCCCCCCCCEEEEEC
DRASDRIAVE
CCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]