| Definition | Eubacterium rectale ATCC 33656, complete genome. |
|---|---|
| Accession | NC_012781 |
| Length | 3,449,685 |
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The map label for this gene is 238923917
Identifier: 238923917
GI number: 238923917
Start: 1436319
End: 1438850
Strand: Direct
Name: 238923917
Synonym: EUBREC_1555
Alternate gene names: NA
Gene position: 1436319-1438850 (Clockwise)
Preceding gene: 238923916
Following gene: 238923918
Centisome position: 41.64
GC content: 43.64
Gene sequence:
>2532_bases ATGAATTTTGTTAAAAAGCATCCACTTTTGACAGCGTTTTTAATTCCGTTTTTCATATGTATAATCATCTGTATAGGAAA TGGTGTATATCCATTTGGCGATTACTGCCTTTTGCATATGGATTTGTATCACCAGTATCTGCCTTTCTTTAATGAGCTGT GGGAGAAGCTAAGAAATGGTGCGAGCCTCATGTATACATGGAATATCGGGCTTGGCAGTGATTTTGTATCGGTATTTGCC TATTATCTGGCGAGTCCGTTAAACTGGCTTGTGGTGCTTTTTCCAAAGAGCCATATTATTGAGTTTATCGAGCTGCTAAT CATTTTTAAGATTTCGCTAAGCGGAGCAACATTTTTTTATTTTCTGAAGGAACACTTTGGGCTTCTTGGAAAGGATAACA GGTATCACGATAATACATTTGTGCCGGCATTTGTTTTTTCTACGGCATATGCACTTTCCGGCTTTGTAGCTGCGTATAGC TGGGATGTCATGTGGATGGATGTTGTGGCGGTTGCACCGCTTGCGGTAGTAGGACTTGAGAAGCTTGTGCGGGACAAAAA GCCGGTGCTTTACTATGTATCACTGGCACTTTGTATATTGTCAAATTATTATCTGAGCATCATGCTTTGCATCTTTTTGG TATTCTGGTTTGCATGGCTTTTCTTTACGCAAAATGGCGGTAAAATGGCTGCAATTGTGAGATTTGCCGTTTACTCACTT TTGGCTGGAGGCACTGCGATGGTGCTAATCATCCCGGAGCTTATCATTTTAAGCTACAGCGGTTCGTCGGGCATCGAGTT TCCAAAGCAGATAGAGTGGTATTTTAATCTCTTATCAGAGGTCGGCAGGATGTGCACGACAGCAAGCGTCTATGAGGGTG CAGAGAACTGGCCGAATCTGTATGCCGGAGCCTTTAGTGTGATGCTTTTGATACTGTTTGTGCTCAACAAAAGGATTAAT TGGAAGAAAAAAATAGCTCCAGTATTGTTTGTGTTGTTTTTCATGGCAAGCTTTGCCAATAAACAGCTTGACTTTATATG GCACGGACTGCATTTTCCGGATTCGCTGCCTGGCAGACAGTCGTATCTGTATGCATTTCTTGTATTGACCATAGGCTATG CTACAGTAAGAAAGTGGCGTGGCATAAGACTGTGGCATGTTGGTGTGGCAGTGGTATTTGCATCGGCGCTTATGGCAGTA AGCACGATGTTTGCCGGTGAGGATGTGACAGAGTATTATGCAGTTATCATAAGTATATTGTTTGTTGCGCTGTACGGCAT TATGACAGTACTTTTAAAGCTTGCAGCAAGAAAAAACAGGGAGCTTTTGATGGTCATAACATGCGGTATTGCGATTGTGG AGCTGGCTGTCAATATGGCTGTGACAGGACTTGGATGTACCGGCAGAAGTAGCTACAATGCCAATGTGGACGATATGCAA AAGGCACTGGAGCTGGCAAAAGAGGATGCAGCTGACAACGATGTACCATTTTACAGGGTTGAGGATACAGGCCGACTAAC TAAAAATGATGACACACGATACGGCTATGCTTCTGGAACACAGTTTTCTTCCCTGATGAATATAAATGTGAGCCATTTTT ATCAGGCTCTTTATATGGAGGGAGGCAAGAATTTCTACTGTTATAACGGTGCCACACCTGTCACGTCAGCCATGCTTTCG GTCAGATATATGGTTACAAAATCAATACAGCCACAGAATGAGCTGACTACACTTGTTGGAAAATGCGGAAATCACTATCT GTATCGGAATAACTACACACTTCCGCTTGGTTTTATGATGGATGAGGGAGTGATTGATGCGTGGAAGCCATCCTCGTCAT CGAAAATCTATTCGATTAATTCCCTTGGCAGGCTCCTTGGCGCAGCAGATGATATGCTGACCATGACAGAGTGCACTCAG GACGAAAATCCGGGAACTACGACTCTCACCTTTGACCATGACGGATATTATTATGCGGCATACGATTCGTGCAGCACTGA CAGTCTGACCTTCAGCCACGGAGAGTATGAGACCACATATTCGAAGACCACTCACAGGTATCTGTTTGACCTGGGATATG TGAAGGCGGGGGAGACAGTTTCCGTCACAAACACTGATGCCGATGCTGTACGATTTAATGTATACGAGCTTTCCATTGCT GCAGTTGAGAGTGCTTACAATACACTCAATGAGCAGACACTCTCGGTGGATGATTTTTCAGATACACACATAAGCGGACA CATTGATGTGAAGCAGGCAGGACAGCTTGTACTTTCTATTCCGAGTGAAAAGGGATGGACTATGAAAGTGGATGGAAAGG ATGCTGAGTATGAGGATTTTTCCGATACATTTGTGAGCATTCATCTGGATGAGGGAGAGCATGAGATAGAGCTTTATTAT GAGACACCGGGGCTTAAGGCAGGTGCAGCTATAAGCGCAGGCTGTGTGGGTGTCTTTCTACTGCTTTTATTGTTTCGTCA AATAGTTAAGAGACGCAGCCGTTTAAAGTTTAAAGCGAACAGTGACAGATAG
Upstream 100 bases:
>100_bases ACAAGGCAACCGGCAGCAAAAAGAAGCAGGCCGATTCGGATATGCTAAACGATTATAAGCTTTTGCAATATTACAGACTG TTTGACTGGGAGGATAAGTG
Downstream 100 bases:
>100_bases TGAATGTACTGACAGACAACGTATATAGTTCATTTATGCGAAACACAGAATGTTCAAATTGTAATAGTATAATTCAATAA TAAAAATAAAACAGGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 843; Mature: 843
Protein sequence:
>843_residues MNFVKKHPLLTAFLIPFFICIIICIGNGVYPFGDYCLLHMDLYHQYLPFFNELWEKLRNGASLMYTWNIGLGSDFVSVFA YYLASPLNWLVVLFPKSHIIEFIELLIIFKISLSGATFFYFLKEHFGLLGKDNRYHDNTFVPAFVFSTAYALSGFVAAYS WDVMWMDVVAVAPLAVVGLEKLVRDKKPVLYYVSLALCILSNYYLSIMLCIFLVFWFAWLFFTQNGGKMAAIVRFAVYSL LAGGTAMVLIIPELIILSYSGSSGIEFPKQIEWYFNLLSEVGRMCTTASVYEGAENWPNLYAGAFSVMLLILFVLNKRIN WKKKIAPVLFVLFFMASFANKQLDFIWHGLHFPDSLPGRQSYLYAFLVLTIGYATVRKWRGIRLWHVGVAVVFASALMAV STMFAGEDVTEYYAVIISILFVALYGIMTVLLKLAARKNRELLMVITCGIAIVELAVNMAVTGLGCTGRSSYNANVDDMQ KALELAKEDAADNDVPFYRVEDTGRLTKNDDTRYGYASGTQFSSLMNINVSHFYQALYMEGGKNFYCYNGATPVTSAMLS VRYMVTKSIQPQNELTTLVGKCGNHYLYRNNYTLPLGFMMDEGVIDAWKPSSSSKIYSINSLGRLLGAADDMLTMTECTQ DENPGTTTLTFDHDGYYYAAYDSCSTDSLTFSHGEYETTYSKTTHRYLFDLGYVKAGETVSVTNTDADAVRFNVYELSIA AVESAYNTLNEQTLSVDDFSDTHISGHIDVKQAGQLVLSIPSEKGWTMKVDGKDAEYEDFSDTFVSIHLDEGEHEIELYY ETPGLKAGAAISAGCVGVFLLLLLFRQIVKRRSRLKFKANSDR
Sequences:
>Translated_843_residues MNFVKKHPLLTAFLIPFFICIIICIGNGVYPFGDYCLLHMDLYHQYLPFFNELWEKLRNGASLMYTWNIGLGSDFVSVFA YYLASPLNWLVVLFPKSHIIEFIELLIIFKISLSGATFFYFLKEHFGLLGKDNRYHDNTFVPAFVFSTAYALSGFVAAYS WDVMWMDVVAVAPLAVVGLEKLVRDKKPVLYYVSLALCILSNYYLSIMLCIFLVFWFAWLFFTQNGGKMAAIVRFAVYSL LAGGTAMVLIIPELIILSYSGSSGIEFPKQIEWYFNLLSEVGRMCTTASVYEGAENWPNLYAGAFSVMLLILFVLNKRIN WKKKIAPVLFVLFFMASFANKQLDFIWHGLHFPDSLPGRQSYLYAFLVLTIGYATVRKWRGIRLWHVGVAVVFASALMAV STMFAGEDVTEYYAVIISILFVALYGIMTVLLKLAARKNRELLMVITCGIAIVELAVNMAVTGLGCTGRSSYNANVDDMQ KALELAKEDAADNDVPFYRVEDTGRLTKNDDTRYGYASGTQFSSLMNINVSHFYQALYMEGGKNFYCYNGATPVTSAMLS VRYMVTKSIQPQNELTTLVGKCGNHYLYRNNYTLPLGFMMDEGVIDAWKPSSSSKIYSINSLGRLLGAADDMLTMTECTQ DENPGTTTLTFDHDGYYYAAYDSCSTDSLTFSHGEYETTYSKTTHRYLFDLGYVKAGETVSVTNTDADAVRFNVYELSIA AVESAYNTLNEQTLSVDDFSDTHISGHIDVKQAGQLVLSIPSEKGWTMKVDGKDAEYEDFSDTFVSIHLDEGEHEIELYY ETPGLKAGAAISAGCVGVFLLLLLFRQIVKRRSRLKFKANSDR >Mature_843_residues MNFVKKHPLLTAFLIPFFICIIICIGNGVYPFGDYCLLHMDLYHQYLPFFNELWEKLRNGASLMYTWNIGLGSDFVSVFA YYLASPLNWLVVLFPKSHIIEFIELLIIFKISLSGATFFYFLKEHFGLLGKDNRYHDNTFVPAFVFSTAYALSGFVAAYS WDVMWMDVVAVAPLAVVGLEKLVRDKKPVLYYVSLALCILSNYYLSIMLCIFLVFWFAWLFFTQNGGKMAAIVRFAVYSL LAGGTAMVLIIPELIILSYSGSSGIEFPKQIEWYFNLLSEVGRMCTTASVYEGAENWPNLYAGAFSVMLLILFVLNKRIN WKKKIAPVLFVLFFMASFANKQLDFIWHGLHFPDSLPGRQSYLYAFLVLTIGYATVRKWRGIRLWHVGVAVVFASALMAV STMFAGEDVTEYYAVIISILFVALYGIMTVLLKLAARKNRELLMVITCGIAIVELAVNMAVTGLGCTGRSSYNANVDDMQ KALELAKEDAADNDVPFYRVEDTGRLTKNDDTRYGYASGTQFSSLMNINVSHFYQALYMEGGKNFYCYNGATPVTSAMLS VRYMVTKSIQPQNELTTLVGKCGNHYLYRNNYTLPLGFMMDEGVIDAWKPSSSSKIYSINSLGRLLGAADDMLTMTECTQ DENPGTTTLTFDHDGYYYAAYDSCSTDSLTFSHGEYETTYSKTTHRYLFDLGYVKAGETVSVTNTDADAVRFNVYELSIA AVESAYNTLNEQTLSVDDFSDTHISGHIDVKQAGQLVLSIPSEKGWTMKVDGKDAEYEDFSDTFVSIHLDEGEHEIELYY ETPGLKAGAAISAGCVGVFLLLLLFRQIVKRRSRLKFKANSDR
Specific function: Unknown
COG id: COG4485
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94875; Mature: 94875
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFVKKHPLLTAFLIPFFICIIICIGNGVYPFGDYCLLHMDLYHQYLPFFNELWEKLRNG CCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ASLMYTWNIGLGSDFVSVFAYYLASPLNWLVVLFPKSHIIEFIELLIIFKISLSGATFFY CEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHEECCCHHHHH FLKEHFGLLGKDNRYHDNTFVPAFVFSTAYALSGFVAAYSWDVMWMDVVAVAPLAVVGLE HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KLVRDKKPVLYYVSLALCILSNYYLSIMLCIFLVFWFAWLFFTQNGGKMAAIVRFAVYSL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH LAGGTAMVLIIPELIILSYSGSSGIEFPKQIEWYFNLLSEVGRMCTTASVYEGAENWPNL HCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YAGAFSVMLLILFVLNKRINWKKKIAPVLFVLFFMASFANKQLDFIWHGLHFPDSLPGRQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHH SYLYAFLVLTIGYATVRKWRGIRLWHVGVAVVFASALMAVSTMFAGEDVTEYYAVIISIL HHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVALYGIMTVLLKLAARKNRELLMVITCGIAIVELAVNMAVTGLGCTGRSSYNANVDDMQ HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH KALELAKEDAADNDVPFYRVEDTGRLTKNDDTRYGYASGTQFSSLMNINVSHFYQALYME HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHC GGKNFYCYNGATPVTSAMLSVRYMVTKSIQPQNELTTLVGKCGNHYLYRNNYTLPLGFMM CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEEE DEGVIDAWKPSSSSKIYSINSLGRLLGAADDMLTMTECTQDENPGTTTLTFDHDGYYYAA CCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEEEE YDSCSTDSLTFSHGEYETTYSKTTHRYLFDLGYVKAGETVSVTNTDADAVRFNVYELSIA ECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCEEEEEEEEHHH AVESAYNTLNEQTLSVDDFSDTHISGHIDVKQAGQLVLSIPSEKGWTMKVDGKDAEYEDF HHHHHHHHHCCCEEECCCCCCCCEECEEEHHHHCCEEEECCCCCCCEEEECCCCCCCCCC SDTFVSIHLDEGEHEIELYYETPGLKAGAAISAGCVGVFLLLLLFRQIVKRRSRLKFKAN CCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC SDR CCC >Mature Secondary Structure MNFVKKHPLLTAFLIPFFICIIICIGNGVYPFGDYCLLHMDLYHQYLPFFNELWEKLRNG CCCCHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC ASLMYTWNIGLGSDFVSVFAYYLASPLNWLVVLFPKSHIIEFIELLIIFKISLSGATFFY CEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHEECCCHHHHH FLKEHFGLLGKDNRYHDNTFVPAFVFSTAYALSGFVAAYSWDVMWMDVVAVAPLAVVGLE HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH KLVRDKKPVLYYVSLALCILSNYYLSIMLCIFLVFWFAWLFFTQNGGKMAAIVRFAVYSL HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH LAGGTAMVLIIPELIILSYSGSSGIEFPKQIEWYFNLLSEVGRMCTTASVYEGAENWPNL HCCCCEEEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH YAGAFSVMLLILFVLNKRINWKKKIAPVLFVLFFMASFANKQLDFIWHGLHFPDSLPGRQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHH SYLYAFLVLTIGYATVRKWRGIRLWHVGVAVVFASALMAVSTMFAGEDVTEYYAVIISIL HHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVALYGIMTVLLKLAARKNRELLMVITCGIAIVELAVNMAVTGLGCTGRSSYNANVDDMQ HHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHH KALELAKEDAADNDVPFYRVEDTGRLTKNDDTRYGYASGTQFSSLMNINVSHFYQALYME HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHC GGKNFYCYNGATPVTSAMLSVRYMVTKSIQPQNELTTLVGKCGNHYLYRNNYTLPLGFMM CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEEE DEGVIDAWKPSSSSKIYSINSLGRLLGAADDMLTMTECTQDENPGTTTLTFDHDGYYYAA CCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHCCCCCCCCCEEEEEECCCEEEEE YDSCSTDSLTFSHGEYETTYSKTTHRYLFDLGYVKAGETVSVTNTDADAVRFNVYELSIA ECCCCCCCEEECCCCCCCHHHHHHHHHHHHHCEEECCCEEEEECCCCCCEEEEEEEEHHH AVESAYNTLNEQTLSVDDFSDTHISGHIDVKQAGQLVLSIPSEKGWTMKVDGKDAEYEDF HHHHHHHHHCCCEEECCCCCCCCEECEEEHHHHCCEEEECCCCCCCEEEECCCCCCCCCC SDTFVSIHLDEGEHEIELYYETPGLKAGAAISAGCVGVFLLLLLFRQIVKRRSRLKFKAN CCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEECCCC SDR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA